Factsheet for VIT_01s0026g01420.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69398	Soybean	plasma membrane	62.97	65.53
CDY48385	Canola	plasma membrane	60.78	64.94
CDY23541	Canola	plasma membrane	60.16	64.27
Bra003973.1-P	Field mustard	plasma membrane	62.34	64.15
PGSC0003DMT400058195	Potato	plasma membrane	63.75	63.75
AT1G69910.1	Thale cress	plasma membrane	62.19	62.58
GSMUA_Achr5P14980_001	Banana	plasma membrane	37.81	47.92
HORVU5Hr1G107330.1	Barley	plasma membrane	32.66	47.72
TraesCS5A01G449000.1	Wheat	plasma membrane	32.5	47.49
EER93266	Sorghum	plasma membrane	32.5	47.27
TraesCS5B01G456400.1	Wheat	plasma membrane	32.66	47.18
Zm00001d034495_P001	Maize	plasma membrane	32.03	47.13
TraesCS5B01G453800.1	Wheat	plasma membrane	32.66	47.07
TraesCS5D01G455500.1	Wheat	plasma membrane	32.5	46.74
VIT_01s0011g03950.t01	Wine grape	plastid	24.06	33.85
VIT_14s0006g02600.t01	Wine grape	plasma membrane	27.81	29.57
VIT_08s0007g04350.t01	Wine grape	plasma membrane	28.75	28.8
VIT_01s0011g03980.t01	Wine grape	plasma membrane	28.28	28.46
VIT_13s0019g02300.t01	Wine grape	plasma membrane	27.34	27.82
VIT_08s0007g00960.t01	Wine grape	plasma membrane	26.56	26.73
VIT_01s0011g03960.t01	Wine grape	plasma membrane	27.66	25.62
VIT_18s0001g11620.t01	Wine grape	plasma membrane	27.5	25.36
VIT_00s0207g00280.t01	Wine grape	plasma membrane	25.78	23.95
VIT_17s0000g03340.t01	Wine grape	plasma membrane	30.78	20.48

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100241694	wikigene:100241694	MapMan:18.4.1.20	Gene3D:3.30.200.20	ProteinID:CCB56593
ProteinID:CCB56593.1	UniProt:F6HPG5	EMBL:FN596002	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100241694	wikigene:LOC100241694
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00109	PFscan:PS50011	PANTHER:PTHR27005	PANTHER:PTHR27005:SF56
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	SignalP:SignalP-noTM	TIGR:TC70594	TMHMM:TMhelix
InterPro:Tyr_kinase_AS	UniParc:UPI00015CB152	ArrayExpress:VIT_01s0026g01420	EnsemblPlantsGene:VIT_01s0026g01420	EnsemblPlants:VIT_01s0026g01420.t01	unigene:Vvi.15355
RefSeq:XP_002268965	RefSeq:XP_002268965.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1:-:10393877..10396296

Molecular Weight (calculated)

70650.6 Da

IEP (calculated)

7.713

GRAVY (calculated)

-0.103

Length

640 amino acids

Sequence
(BLAST)

001: MTTVAAAPPC LHRIASAALF FSLLLLLSFA PALEACSSRP GTSGSSCPPF TSTPSFPFSS TPGCGHPSFQ IRCSFPHSII SINNLSFALV QYQPNSSSLN
101: LAPQPLIPAT AHRNCSLPQL LSIPNRSINL SGSPFRVSDA SCSRLSLLRP CPPPNLPNCS RCSWECRLIK NPLQLLHDCG STHATLSEQG CQPDVLGFLD
201: RFLKWGIQVD WDEDQDAYFT NCKECQAKNG VCGFNSSDPR QPFICFHLKN QISPPWIRQD SPNRIAILCS IFVLTCVFLA IAVATAILRS KKLNSAAEQD
301: PTTLFLHRHR SASLLPPVFT YEELDTSTNR FDSKRKIGDG GFGSVYLGQL YDGRIVAVKH LHQHHPAAAA GRAFSTKSFC NEILILSSID HPNLVKLHGY
401: CSDPRGLLLV YDYVPNGTLA DHLHGPKSLY RKASLTWQVR IDIALQTAMA IEYLHFSVEP AIVHRDITSS NIFVERDMRI KVGDFGLSRL LVFPEATSSS
501: SSGYVWTGPQ GTPGYLDPDY HRSFRLTEKS DVYSLGVVLL ELISGMKAVD HTRDKRDMTL ADLMVSKIQM GLLHQVVDPI LLLDADAMNG VDAVAELAFR
601: CVQTEKDDRP DSKEVVAELK RIRNRTRIQR GSTQDADENV

Best Arabidopsis Sequence Match ( AT1G69910.1 )
(BLAST)

001: MSQPPWRCFS LLIFVLTIFS TKPSSASTSC SSSFHCPPFN SSPPYPFSAS PGCGHPNFQI QCSSSRATIT IKNLTFSILH YSSISSSLTL SPITNTNRNT
101: NNCSSLRFSS SPNRFIDLTG SPFRVSDSSC SRLSLLRPCS PFTLPNCSRC PWDCKLLKNP GRILHGCEST HGSLSEQGCQ GDLLGFLQDF FTRFGFEVEW
201: DESQDPYFIK CRDCQIKNGV CGFNSTHPNQ DFICFHKSRS ELVTQRDNNK RVNHIAVLSL IFALTCLLLV FSVAVAIFRS RRASFLSSIN EEDPAALFLR
301: HHRSAALLPP VFTFEELESA TNKFDPKRKI GDGGFGSVYL GQLSDGQLLA VKFLHHHHGA TAAATEHCKA FSMKSFCNEI LILSSINHPN LVKLHGYCSD
401: PRGLLLVHDY VTNGTLADHL HGRGPKMTWR VRLDIALQTA LAMEYLHFDI VPPVVHRDIT SSNIFVEKDM KIKVGDFGLS RLLVFSETTV NSATSSDYVC
501: TGPQGTPGYL DPDYHRSFRL TEKSDVYSYG VVLMELITGM KAVDQRREKR DMALADLVVS KIQMGLLDQV IDPLLALDGD DVAAVSDGFG VAAVAELAFR
601: CVATDKDDRP DAKEIVQELR RIRSHTRVAD DDVAKN

Arabidopsis Description

LRK10L-1.5LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.5 [Source:UniProtKB/Swiss-Prot;Acc:F4I3V3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.