Factsheet for VIT_13s0019g02300.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 9
endoplasmic reticulum 5
vacuole 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400005156	Potato	plasma membrane	72.97	73.21
Solyc12g088040.1.1	Tomato	plasma membrane	71.7	72.62
KRH31037	Soybean	endoplasmic reticulum, extracellular	72.81	70.57
Zm00001d050164_P001	Maize	plasma membrane	63.91	61.75
EES13653	Sorghum	plasma membrane	64.71	61.39
VIT_08s0007g00960.t01	Wine grape	plasma membrane	60.41	59.75
TraesCS3B01G141500.1	Wheat	plasma membrane	61.69	59.69
TraesCS3A01G122300.1	Wheat	plasma membrane	61.53	59.36
Os05t0318100-00	Rice	plasma membrane	61.69	59.33
HORVU3Hr1G022780.2	Barley	plasma membrane	61.84	59.03
TraesCS3D01G124200.1	Wheat	plasma membrane	60.73	58.95
VIT_08s0007g04350.t01	Wine grape	plasma membrane	51.35	50.55
GSMUA_Achr6P15140_001	Banana	plasma membrane	51.83	48.22
VIT_01s0011g03950.t01	Wine grape	plastid	23.37	32.31
VIT_14s0006g02600.t01	Wine grape	plasma membrane	28.14	29.4
VIT_18s0001g11620.t01	Wine grape	plasma membrane	32.43	29.39
VIT_00s0207g00280.t01	Wine grape	plasma membrane	31.64	28.88
VIT_01s0026g01420.t01	Wine grape	plasma membrane	27.82	27.34
VIT_01s0011g03980.t01	Wine grape	plasma membrane	27.03	26.73
VIT_01s0011g03960.t01	Wine grape	plasma membrane	25.28	23.01
VIT_17s0000g03340.t01	Wine grape	plasma membrane	29.73	19.44

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100246196	wikigene:100246196	MapMan:18.4.1.25	Gene3D:3.30.200.20	ProteinID:CCB56310
ProteinID:CCB56310.1	ncoils:Coil	UniProt:F6HNU0	EMBL:FN595998	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0030246	GO:GO:0030247
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100246196	wikigene:LOC100246196	PFAM:PF07714	PFAM:PF13947
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27005	PANTHER:PTHR27005:SF44	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM
TIGR:TC66244	TMHMM:TMhelix	UniParc:UPI00015C9653	ArrayExpress:VIT_13s0019g02300	EnsemblPlantsGene:VIT_13s0019g02300	EnsemblPlants:VIT_13s0019g02300.t01
unigene:Vvi.6250	InterPro:WAK_GUB	RefSeq:XP_002282445	RefSeq:XP_002282445.1	RefSeq:XP_003633474	RefSeq:XP_003633474.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr13:+:3570930..3573535

Molecular Weight (calculated)

68440.7 Da

IEP (calculated)

6.238

GRAVY (calculated)

-0.138

Length

629 amino acids

Sequence
(BLAST)

001: MPNLLLFTAA LLLCAVCAMA ANRCPDCGNT SVPYPLSTGA DCGDQEYKIR CDAGTLRFDT LNSSYSISSI TPQIQRFVIR PASFAGNTCV TTDLPNQGIQ
101: LNESLPFNVT SSNTILYLNC TDTLLRSPLN CSSISLCHTY INGTRDAAAC EDAPICCTFK AGGSTTSHSI RVRDAGCRAY RSFVNLDAST PVNRWPEPGV
201: EIQWVSPREP VCTSQSDCTD GMNSTCGPDP ATAGVSRCFC KSGLWWDPVG GLCAQNVTCQ DPDGCGSTNK TPLIAGLTVG IGAALIAAVI AILVYRRHRR
301: IKEAQDRLAR EREEILNANG GGKFAKNFTG KEIKRATNSF SHDRLLGAGG YGEVYKGILD DGTIVAIKCA KLGNAKGTDQ VLNEVGILCQ VNHRSLVRLL
401: GCCVELEQPI MVYEFIPNGT LLEHLQGQRP GGRGSLTWSH RLRIAHDTAE GLAYLHSSAV PPIYHRDVKS SNILLDEKMN AKVADFGLSR LAHTDMSHVS
501: TCAQGTLGYL DPEYYRNYQL TDKSDVYSFG VVLLELLTSQ KAIDFNRPAD DVNLAVYVQR TVEEERLMDA IDPLLKEQAS SLELETMKAM GFLAVGCLEE
601: RRQNRPSMKE VTEEIGYIIS IATAKVVEQ

Best Arabidopsis Sequence Match ( AT5G02070.1 )
(BLAST)

001: MEKKRSYYAL LIPTLLTVWL ACAGHSCARH AKAKPPMAGP PRCPNCGPMV VPYPLSTGPT CGDQAYRINC VGGKLYFGAL HGSSYVITSI NSVTQRIVLR
101: PPGLASSVSC ISADVSKQGL ELDPHLPFSI TSSNTILLLN CSQAMLQAPI DCSPTSLCYS YIKNNASPCS KAPLCCTFRT DGSQTAYTIR INGGGCLAYQ
201: SFVGLNPNKE VPPPGKKWPD TGLELQWALP KEPVCKTDVD CNLLLGKSKC LPDPTSLGLK RCSCKKGLEW DPVNAICGKC RHGKHCKKKK KTVVFAGAAV
301: AVVGVTLAIA VAVIGTKHSH QKVKKDIHKN IVKEREEMLS ANSTGKSSRI FTGREITKAT NNFSKDNLIG TGGFGEVFKA VLEDGTITAI KRAKLNNTKG
401: TDQILNEVRI LCQVNHRSLV RLLGCCVDLE LPLLIYEFIP NGTLFEHLHG SSDRTWKPLT WRRRLQIAYQ TAEGLAYLHS AAQPPIYHRD VKSSNILLDE
501: KLNAKVSDFG LSRLVDLTET ANNESHIFTG AQGTLGYLDP EYYRNFQLTD KSDVYSFGVV LLEMVTSKKA IDFTREEEDV NLVMYINKMM DQERLTECID
601: PLLKKTANKI DMQTIQQLGN LASACLNERR QNRPSMKEVA DEIEYIINIL SQEVTET

Arabidopsis Description

WAKL20Wall-associated receptor kinase-like 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.