Factsheet for Solyc12g088040.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4
nucleus 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400005156	Potato	plasma membrane	93.08	92.19
VIT_13s0019g02300.t01	Wine grape	plasma membrane	72.62	71.7
KRH31037	Soybean	endoplasmic reticulum, extracellular	67.95	65.02
Zm00001d050164_P001	Maize	plasma membrane	61.35	58.53
EES13653	Sorghum	plasma membrane	62.48	58.52
Os05t0318100-00	Rice	plasma membrane	59.74	56.73
TraesCS3B01G141500.1	Wheat	plasma membrane	59.26	56.62
TraesCS3D01G124200.1	Wheat	plasma membrane	58.45	56.02
TraesCS3A01G122300.1	Wheat	plasma membrane	58.45	55.67
HORVU3Hr1G022780.2	Barley	plasma membrane	58.94	55.54
Solyc09g011200.1.1	Tomato	plasma membrane	54.27	52.9
Solyc09g008640.1.1	Tomato	plasma membrane	50.08	49.52
GSMUA_Achr6P15140_001	Banana	plasma membrane	50.89	46.75
Solyc05g009010.1.1	Tomato	cytosol	18.2	37.42
Solyc04g007390.2.1	Tomato	cytosol	20.13	37.31
Solyc05g008970.1.1	Tomato	plasma membrane	25.44	34.5
Solyc04g079710.2.1	Tomato	plasma membrane	33.82	30.93
Solyc02g090110.2.1	Tomato	plasma membrane	34.3	30.3
Solyc05g010530.2.1	Tomato	plasma membrane	17.39	28.42
Solyc05g008990.2.1	Tomato	plasma membrane	29.95	28.1
Solyc12g036330.1.1	Tomato	plasma membrane	29.15	27.8
Solyc05g008980.2.1	Tomato	plasma membrane	28.18	27.73
Solyc05g008950.2.1	Tomato	mitochondrion	27.38	27.16
Solyc03g119240.2.1	Tomato	plasma membrane	29.15	26.89
Solyc05g008940.2.1	Tomato	plasma membrane	27.38	25.88
Solyc02g086270.2.1	Tomato	plasma membrane	32.21	25.81
Solyc05g008960.2.1	Tomato	plasma membrane	27.54	25.71
Solyc05g008930.2.1	Tomato	plasma membrane	29.31	24.4

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.25	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0030246	GO:GO:0030247	InterPro:IPR000719	UniProt:K4DGM5
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFAM:PF13947	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27005	PANTHER:PTHR27005:SF44	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc12g088040.1	EnsemblPlants:Solyc12g088040.1.1	TMHMM:TMhelix
UniParc:UPI000276A9B6	InterPro:WAK_GUB	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr12:+:63538244..63541260

Molecular Weight (calculated)

67958.0 Da

IEP (calculated)

5.992

GRAVY (calculated)

-0.096

Length

621 amino acids

Sequence
(BLAST)

001: MANLLLLLLL ICTTPAVLSA RRCSDCGSSP VPYPLSTGPD CGDQSYKIRC SNRLFFDTLN NSYPISSISP DTQTLTIEPS PFLSNTCITQ DISTVGVQLN
101: SSLPFNITSS NTIVFLNCSQ SLLSSPLNCT AESLCHTYLN GTSENDGAIG ACRNAPICCT FRAGGSSTSY MIRVRESGCR AYRSFVNLNP SLPVSRWPEA
201: GMELQWVSPP EPVCTIQSDC DSDSTCGPDP NSNGGVNRCF CHSGFHWDPI AALCARDVTC QDRDGCGRDH TALIAGLTSG LSVAVVAAVI GFFVYRRQKR
301: IKEARDRLTR EREDILSSGG VKSAKLFTGK EIKKATNNFS TDRLLGAGGY GEVYYGKLDD DTVVAVKCAK LGNAKGIEQV LNEVRILCQV NHKNLVRILG
401: CCVELEQPLL VYEYVPNGTL SDHLYLQRKL LTWDSRLSIA HATAEGLAYL HFSAVPPIYH RDVKSSNILL DDKLNAKVAD FGLSRLAHTD LSHVSTCAQG
501: TLGYLDPEYY RNYQLTDKSD VYSFGVVLLE LLTSQKAIDF SRPQDDVNLA IYVQRLVEEE RIMDAVDPAL KVGASSVELE TMKALGFLAV SCLEEKRQSR
601: PSMKEVAEEI EYIITIAAAK Q

Best Arabidopsis Sequence Match ( AT5G02070.1 )
(BLAST)

001: MEKKRSYYAL LIPTLLTVWL ACAGHSCARH AKAKPPMAGP PRCPNCGPMV VPYPLSTGPT CGDQAYRINC VGGKLYFGAL HGSSYVITSI NSVTQRIVLR
101: PPGLASSVSC ISADVSKQGL ELDPHLPFSI TSSNTILLLN CSQAMLQAPI DCSPTSLCYS YIKNNASPCS KAPLCCTFRT DGSQTAYTIR INGGGCLAYQ
201: SFVGLNPNKE VPPPGKKWPD TGLELQWALP KEPVCKTDVD CNLLLGKSKC LPDPTSLGLK RCSCKKGLEW DPVNAICGKC RHGKHCKKKK KTVVFAGAAV
301: AVVGVTLAIA VAVIGTKHSH QKVKKDIHKN IVKEREEMLS ANSTGKSSRI FTGREITKAT NNFSKDNLIG TGGFGEVFKA VLEDGTITAI KRAKLNNTKG
401: TDQILNEVRI LCQVNHRSLV RLLGCCVDLE LPLLIYEFIP NGTLFEHLHG SSDRTWKPLT WRRRLQIAYQ TAEGLAYLHS AAQPPIYHRD VKSSNILLDE
501: KLNAKVSDFG LSRLVDLTET ANNESHIFTG AQGTLGYLDP EYYRNFQLTD KSDVYSFGVV LLEMVTSKKA IDFTREEEDV NLVMYINKMM DQERLTECID
601: PLLKKTANKI DMQTIQQLGN LASACLNERR QNRPSMKEVA DEIEYIINIL SQEVTET

Arabidopsis Description

WAKL20Wall-associated receptor kinase-like 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.