Factsheet for Zm00001d050164_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
golgi 3
plasma membrane 5
endoplasmic reticulum 3
vacuole 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

plasma membrane: 23353019

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13653	Sorghum	plasma membrane	87.25	85.67
TraesCS3B01G141500.1	Wheat	plasma membrane	79.11	79.23
Os05t0318100-00	Rice	plasma membrane	79.42	79.05
TraesCS3A01G122300.1	Wheat	plasma membrane	79.11	78.99
TraesCS3D01G124200.1	Wheat	plasma membrane	78.49	78.86
HORVU3Hr1G022780.2	Barley	plasma membrane	79.11	78.15
VIT_13s0019g02300.t01	Wine grape	plasma membrane	61.75	63.91
PGSC0003DMT400005156	Potato	plasma membrane	59.45	61.72
Solyc12g088040.1.1	Tomato	plasma membrane	58.53	61.35
KRH31037	Soybean	endoplasmic reticulum, extracellular	60.83	61.02
PGSC0003DMT400087311	Potato	plasma membrane	40.09	58.13
CDX73519	Canola	mitochondrion	29.49	56.8
VIT_08s0007g00960.t01	Wine grape	plasma membrane	54.38	55.66
Solyc09g011200.1.1	Tomato	plasma membrane	51.46	52.59
GSMUA_Achr6P15140_001	Banana	plasma membrane	54.38	52.37
KRH00039	Soybean	plastid	42.4	51.78
KRH49166	Soybean	plasma membrane	50.38	50.62
AT5G02070.1	Thale cress	plasma membrane	51.0	50.53
KRH49168	Soybean	plasma membrane	46.54	48.33
Bra007030.1-P	Field mustard	plasma membrane	45.47	47.9
AT3G53840.1	Thale cress	plasma membrane	46.85	47.73
CDY54025	Canola	plasma membrane	46.39	45.97
Bra009616.1-P	Field mustard	plasma membrane	50.23	44.86
CDY40328	Canola	cytosol, nucleus, plasma membrane	50.23	32.96
CDY10472	Canola	plasma membrane	49.92	32.93
Zm00001d034495_P001	Maize	plasma membrane	20.12	30.11
Zm00001d009473_P001	Maize	cytosol	27.96	30.08
Zm00001d028280_P001	Maize	plasma membrane	31.49	28.87
Zm00001d039926_P001	Maize	vacuole	29.49	28.36
Zm00001d008581_P001	Maize	plasma membrane	27.34	27.22
Zm00001d038915_P001	Maize	plasma membrane	29.19	27.18
Zm00001d030942_P001	Maize	plasma membrane	29.95	27.08
Zm00001d011625_P001	Maize	extracellular	29.49	26.74
Zm00001d039931_P002	Maize	plasma membrane, vacuole	25.96	19.81
Zm00001d043800_P003	Maize	plastid	29.19	18.1
Bra009617.1-P	Field mustard	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100382104	MapMan:18.4.1.25	Gene3D:3.30.200.20	ProteinID:AQK52046.1	EMBL:BT063161
UniProt:C0P4E2	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	GO:GO:0030246	GO:GO:0030247	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PFAM:PF13947	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27005
PANTHER:PTHR27005:SF44	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001948DDD	InterPro:WAK_GUB	EnsemblPlantsGene:Zm00001d050164	EnsemblPlants:Zm00001d050164_P001
EnsemblPlants:Zm00001d050164_T001	SEG:seg	:	:	:	:

Description

Wall-associated receptor kinase-like 20

Coordinates

chr4:-:70178212..70181943

Molecular Weight (calculated)

69099.6 Da

IEP (calculated)

7.557

GRAVY (calculated)

-0.019

Length

651 amino acids

Sequence
(BLAST)

001: MGIALLALLL VLPASHARVC PPCGSTAVPY PLSTGDGCGD PAYKVRCAAA TNSSTSSPTL MFDALNGTSY RITSISAATQ RLVVAPAPLV AQGSRCVSEG
101: RGGGVQLNAS LPFNVSSSNT IMLLNCTSAL LLSPLNCSSN SLCHVYANAT GSTAAACAPL PLCCTFVAGG SSTSYSIRVS PQFCSAYRSF VGLDPAAQPP
201: ATWGRRLGLE LQWATPREPL CRTQADCEDG ANATCADDPL TPAARRCFCV PGLSWSPLAG ACQLNPSDCQ IAGGCGGSNH APLIAGLVCG LGGALLLAAA
301: GLLAYRRQRR VRLARERLAK EREEILNANN ASGRTARNFS GRELKRATGN FSRDNLLGAG GYGEVYRGVL GDGTVVAVKC AKLGNTKSTD QVLNEVRVLS
401: QVNHRSLVRL LGCCVDLDQP LMVYEFVPNG TLADHLHGAT SLSRPPTLGW RQRLAIARQT AEGVAYLHSA AVPPIYHRDI KSSNILLDAR LDAKVSDFGL
501: SRLAEPGLSH VSTCAQGTLG YLDPEYYRNY QLTDKSDVYS FGVVLLELLT SKRAIDFARG ADDVNLAVHV QRAADEERLM DVVDPAIKDG ATQLQLDTMK
601: ALGFLALGCL EERRQNRPSM KEVAEEIEYI INIEAAGHPI EQQRTCLDSS E

Best Arabidopsis Sequence Match ( AT5G02070.1 )
(BLAST)

001: MEKKRSYYAL LIPTLLTVWL ACAGHSCARH AKAKPPMAGP PRCPNCGPMV VPYPLSTGPT CGDQAYRINC VGGKLYFGAL HGSSYVITSI NSVTQRIVLR
101: PPGLASSVSC ISADVSKQGL ELDPHLPFSI TSSNTILLLN CSQAMLQAPI DCSPTSLCYS YIKNNASPCS KAPLCCTFRT DGSQTAYTIR INGGGCLAYQ
201: SFVGLNPNKE VPPPGKKWPD TGLELQWALP KEPVCKTDVD CNLLLGKSKC LPDPTSLGLK RCSCKKGLEW DPVNAICGKC RHGKHCKKKK KTVVFAGAAV
301: AVVGVTLAIA VAVIGTKHSH QKVKKDIHKN IVKEREEMLS ANSTGKSSRI FTGREITKAT NNFSKDNLIG TGGFGEVFKA VLEDGTITAI KRAKLNNTKG
401: TDQILNEVRI LCQVNHRSLV RLLGCCVDLE LPLLIYEFIP NGTLFEHLHG SSDRTWKPLT WRRRLQIAYQ TAEGLAYLHS AAQPPIYHRD VKSSNILLDE
501: KLNAKVSDFG LSRLVDLTET ANNESHIFTG AQGTLGYLDP EYYRNFQLTD KSDVYSFGVV LLEMVTSKKA IDFTREEEDV NLVMYINKMM DQERLTECID
601: PLLKKTANKI DMQTIQQLGN LASACLNERR QNRPSMKEVA DEIEYIINIL SQEVTET

Arabidopsis Description

WAKL20Wall-associated receptor kinase-like 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.