Factsheet for Bra009617.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40328	Canola	cytosol, nucleus, plasma membrane	99.62	26.21
CDY10472	Canola	plasma membrane	95.79	25.33
GSMUA_Achr6P15140_001	Banana	plasma membrane	6.51	2.51
Bra032167.1-P	Field mustard	plasma membrane	1.15	0.44
Bra028165.1-P	Field mustard	plasma membrane	1.15	0.33
Bra024755.1-P	Field mustard	plasma membrane	0.77	0.33
Bra004195.1-P	Field mustard	plasma membrane	0.77	0.32
AT5G02070.1	Thale cress	plasma membrane	0.77	0.3
Bra004193.1-P	Field mustard	plasma membrane	0.77	0.29
Bra004194.1-P	Field mustard	cytosol	0.77	0.28
Bra009616.1-P	Field mustard	plasma membrane	0.77	0.27
PGSC0003DMT400087311	Potato	plasma membrane	0.38	0.22
KRH00039	Soybean	plastid	0.38	0.19
Bra040624.1-P	Field mustard	plasma membrane	0.77	0.18
Bra012480.1-P	Field mustard	plasma membrane	0.38	0.16
KRH49168	Soybean	plasma membrane	0.38	0.16
Solyc09g011200.1.1	Tomato	plasma membrane	0.38	0.16
Os05t0318100-00	Rice	plasma membrane	0.38	0.15
Bra039201.1-P	Field mustard	plasma membrane	0.38	0.14
TraesCS3A01G122300.1	Wheat	plasma membrane	0.0	0.0
TraesCS3B01G141500.1	Wheat	plasma membrane	0.0	0.0
TraesCS3D01G124200.1	Wheat	plasma membrane	0.0	0.0
Zm00001d050164_P001	Maize	plasma membrane	0.0	0.0
HORVU3Hr1G022780.2	Barley	plasma membrane	0.0	0.0
EES13653	Sorghum	plasma membrane	0.0	0.0
Bra035246.1-P	Field mustard	plasma membrane	0.0	0.0
Bra031028.1-P	Field mustard	plasma membrane	0.0	0.0
Bra025911.1-P	Field mustard	plasma membrane	0.0	0.0
Bra025433.1-P	Field mustard	cytosol, plasma membrane, plastid	0.0	0.0
Bra012104.1-P	Field mustard	plastid	0.0	0.0
Bra007030.1-P	Field mustard	plasma membrane	0.0	0.0
Bra003973.1-P	Field mustard	plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:Bra009617.1	EnsemblPlants:Bra009617.1-P	EnsemblPlantsGene:Bra009617	Gene3D:3.10.280.10	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	InterPro:IPR036561	InterPro:MAM33
InterPro:MAM33_sf	PANTHER:PTHR10826	PANTHER:PTHR10826:SF12	PFAM:PF02330	SEG:seg	SUPFAM:SSF54529
UniParc:UPI0002547E0E	UniProt:M4CZH0	MapMan:35.1	:	:	:

Description

AT5G02050 (E=4e-098) | mitochondrial glycoprotein family protein / MAM33 family protein

Coordinates

chrA10:+:17449917..17450902

Molecular Weight (calculated)

29290.9 Da

IEP (calculated)

4.194

GRAVY (calculated)

-0.498

Length

261 amino acids

Sequence
(BLAST)

001: MSLTTVLRRA SSRVATLAFR SVRSPLTVRS GAERLILGSQ QLSRASAIPL SRFHSTESAV TKTTADENLV SVLESEIDCA VKEEAPDHNL MEDVPEGFPF
101: KIIDTPGERT VLLQRKFEDE TIQVEVDSSA PYDDDEEGEE EQAEQNDDED EEHSVKIRIP MVVSVSKGDG VCLEFGVSAY PDEIVIDSLS IKHPQGSDNE
201: LAYEGPDFDD LDENLQKAFH RFLEIRGIKP SFTDFLADYV ANKDSREYLQ WLKDVKSFVE K

Best Arabidopsis Sequence Match ( AT5G02050.1 )
(BLAST)

001: MALSTVFRRA SSTVANLAFR AGRSPVSFRS GAVSVERLIR GSHQIRRGSV SSFSVSSFST ESAISKTTAD ENLVSVIESE IECAVAEEAP HDTDFLEDKP
101: EGFPFEIIDN SGERTVLLTR KFEDETIQVE VDSVASYDDE DEEEEAEPNN EEDDEDQESS GKVRVPMVVS VQKGDGVCLE FGVSAYPDEI VIDSLSIKQP
201: QGSDNDLAYE GPDFDDLDEN LQKAFHRYLE IRGIKPSFTT FLADYVANKD SREYLQWLKD LKSFVEK

Arabidopsis Description

At5g02050 [Source:UniProtKB/TrEMBL;Acc:Q9LZM6]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.