Factsheet for VIT_17s0000g03340.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	cytosol, nucleus, plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72047	Soybean	cytosol	3.01	74.36
KRH58616	Soybean	cytosol	6.24	74.07
PGSC0003DMT400014680	Potato	cytosol	27.23	74.01
PGSC0003DMT400040920	Potato	mitochondrion	27.75	69.17
VIT_01s0011g03950.t01	Wine grape	plastid	27.96	59.12
Solyc12g036330.1.1	Tomato	plasma membrane	39.29	58.06
PGSC0003DMT400014682	Potato	plasma membrane	36.38	52.08
PGSC0003DMT400014683	Potato	plasma membrane	35.97	51.87
Solyc03g119240.2.1	Tomato	plasma membrane	35.97	51.41
VIT_14s0006g02600.t01	Wine grape	plasma membrane	31.5	50.33
KRH42522	Soybean	plasma membrane	33.26	48.27
VIT_01s0011g03980.t01	Wine grape	plasma membrane	31.5	47.64
KRH39152	Soybean	endoplasmic reticulum	33.89	46.44
KRH48542	Soybean	endoplasmic reticulum	33.16	45.31
VIT_01s0011g03960.t01	Wine grape	plasma membrane	31.81	44.28
CDY23537	Canola	plastid	5.2	31.45
VIT_01s0026g01420.t01	Wine grape	plasma membrane	20.48	30.78
VIT_13s0019g02300.t01	Wine grape	plasma membrane	19.44	29.73
VIT_08s0007g04350.t01	Wine grape	plasma membrane	18.82	28.33
VIT_00s0207g00280.t01	Wine grape	plasma membrane	19.96	27.87
VIT_08s0007g00960.t01	Wine grape	plasma membrane	17.98	27.2
VIT_18s0001g11620.t01	Wine grape	plasma membrane	19.54	27.09
KRH39159	Soybean	extracellular	4.37	17.0

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.1.20	Gene3D:3.30.200.20	ProteinID:CCB43234	ProteinID:CCB43234.1	UniProt:F6GTN8	EMBL:FN594950
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0030246
GO:GO:0030247	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFAM:PF13947	PFAM:PF14380
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27005	PANTHER:PTHR27005:SF31	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
UniParc:UPI000210893D	ArrayExpress:VIT_17s0000g03340	EnsemblPlantsGene:VIT_17s0000g03340	EnsemblPlants:VIT_17s0000g03340.t01	unigene:Vvi.25062	InterPro:WAK_GUB
InterPro:WAK_assoc_C	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr17:-:3220804..3228158

Molecular Weight (calculated)

108263.0 Da

IEP (calculated)

4.908

GRAVY (calculated)

-0.172

Length

962 amino acids

Sequence
(BLAST)

001: MGSKLFQSFI LHSPITTFFF IFIAIPMCFC VDNQQYEECT SSLYECGDMK GIGYPFWGDG RPKFCGQQGF ELKCQNDDYP LIDIGSLEFR VLNISNSTYA
101: MRIARKDFWD QTCPKEFQST TLNYTLFDYA GTDRNLTLFY GCPDDVLSQL PATWNISNNF TCSVEDINDT TAFYADEAFL GLDQHLAILR TCKINVTLPV
201: LGAAIDELNA NRTGGEFSNG ERLEKAMNMG FDVDYSVVRG LCVHCNTTGG ICGSSSTSSF SCLCRDKSYP YSCQKSEAKP TPLKLSSNAP LQLPTFLHLL
301: CFPLFSLSIP LQMDAQNIFI WKSTFCIIVV IIIFTSFVIE TLSADPKFEA CKPHNCGTGP NVSYPFWIPK EQESYCGFPN FSITCNDEKP VLTISDDYYV
401: IREIFYTNHS FLMSNSAVYD GDSCPTPLHN FSLDRTPFNY SPSHYDLLLF YNCTSVPVET LTIPIDCMSN ATLHSFASFH EEALEYMNFS TESCQSMVNV
501: PVDIDGEEGF GNLLNWNFTE ILREGFVLSW TANNCSSCER SGGRCGFENN EFICFCQDRP HLRTCHDGVC AGLGTLLISS IFFLMYLRRY KKRYPPPLFS
601: RNISSDPSSK TIFESQGSLH GVHIFTYEEL EEATNNFDSS KELGDGGFGT VYHGKLRDGR VVAVKRLYEN NYKRVEQFMN EVEILQLLRH RNLVSLYGCT
701: SRHSRELLLV YEYVPNGTVA DHLHGEQAKP GSLTWPTRMK IAIETASALK YLHASDIIHR DVKTNNILLD SNFSVKVADF GLSRLFPTDV THVSTAPQGT
801: PGYVDPDYHQ CYQLTSKSDV YSFGVVLIEL ISSMPAVDIT RHRHEINLSN MAINKIQNHA LHELVDRSLG FDSDQNIRRM IMAVAELAFQ CLQNEKEMRP
901: AMDEVLEVLM GIESEGCNIV KTEEVEIPAD SVGLLKSKQP PASPDSVTTN WTSWPSTTNG SS

Best Arabidopsis Sequence Match ( AT1G18390.2 )
(BLAST)

001: MNPSTPSLLY TSIFFYFTII ATQTLSLDPK FKACEPKSCG KGPQISYPFY LSGKQESFCG YPSFELTCDD EEKLPVLGIS GEEYVIKNIS YLTQSFQVVN
101: SKASHDPCPR PLNNLTLHRT PFFVNPSHIN FTILYNCSDH LLEDFRTYPL TCARNTSLLR SFGVFDRKKL GKEKQIASMS CQKLVDVPVL ASNESDVMGM
201: TYVEILKRGF VLNWTANSCF RCITSGGRCG TDQQEFVCLC PDGPKLHDTC TNGKNDKRRR VIVKITKSIS GASAAVVGLI AASIFWYVYH RRKTKSYRNS
301: SALLPRNISS DPSAKSFDIE KAEELLVGVH IFSYEELEEA TNNFDPSKEL GDGGFGTVYY GKLKDGRSVA VKRLYDNNFK RAEQFRNEVE ILTGLRHPNL
401: VALFGCSSKQ SRDLLLVYEY VANGTLADHL HGPQANPSSL PWSIRLKIAV ETASALKYLH ASKIIHRDVK SNNILLDQNF NVKVADFGLS RLFPMDKTHV
501: STAPQGTPGY VDPDYHLCYQ LSNKSDVYSF AVVLMELISS LPAVDITRPR QEINLSNMAV VKIQNHELRD MVDPSLGFDT DTRVRQTVIA VAELAFQCLQ
601: SDKDLRPCMS HVQDTLTRIQ NNGFGSEMDV VDVNKSGPLV AQSPDSVIVK WDSK

Arabidopsis Description

Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18390]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.