Factsheet for VIT_01s0011g03950.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plasma membrane 2
plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G066130.1	Barley	plasma membrane	25.93	70.24
Solyc04g007390.2.1	Tomato	cytosol	49.23	66.87
PGSC0003DMT400015323	Potato	cytosol	43.74	66.56
GSMUA_Achr3P29460_001	Banana	cytosol	44.62	65.27
Solyc05g009010.1.1	Tomato	cytosol	41.76	62.91
HORVU6Hr1G080640.1	Barley	cytosol	39.78	62.63
Os04t0113100-00	Rice	cytosol	42.2	62.14
VIT_01s0011g03980.t01	Wine grape	plasma membrane	85.49	61.16
GSMUA_Achr4P13730_001	Banana	plasma membrane	49.45	59.37
HORVU5Hr1G110430.1	Barley	mitochondrion	40.88	58.86
VIT_01s0011g03960.t01	Wine grape	plasma membrane	85.05	56.01
PGSC0003DMT400003222	Potato	plasma membrane	16.26	55.64
GSMUA_Achr1P23150_001	Banana	golgi, plasma membrane, plastid	50.33	55.05
GSMUA_Achr3P01480_001	Banana	plasma membrane	42.86	54.62
TraesCSU01G238700.1	Wheat	mitochondrion, plasma membrane	49.23	52.46
PGSC0003DMT400078440	Potato	plasma membrane	52.53	52.18
GSMUA_Achr6P09830_001	Banana	plasma membrane	49.01	51.74
Solyc05g010530.2.1	Tomato	plasma membrane	39.56	47.37
GSMUA_Achr10P...	Banana	plastid	42.42	45.41
Solyc05g008970.1.1	Tomato	plasma membrane	45.27	44.98
VIT_14s0006g02600.t01	Wine grape	plasma membrane	53.85	40.7
Bra024755.1-P	Field mustard	plasma membrane	54.07	40.46
CDY03856	Canola	plasma membrane	54.95	40.0
AT1G25390.1	Thale cress	plasma membrane	54.95	39.75
Bra012480.1-P	Field mustard	plasma membrane	54.51	39.68
CDY58597	Canola	plasma membrane	54.51	39.68
CDY42110	Canola	plasma membrane	52.97	39.57
KRG94285	Soybean	plasma membrane	58.24	39.49
CDX84986	Canola	plasma membrane	54.51	39.37
PGSC0003DMT400078448	Potato	cytosol, nucleus, plasma membrane	53.41	38.82
KRG90887	Soybean	plasma membrane	55.6	38.28
Zm00001d009473_P001	Maize	cytosol	50.77	38.18
PGSC0003DMT400078444	Potato	plasma membrane	52.31	38.14
PGSC0003DMT400078451	Potato	plasma membrane	54.73	37.73
Solyc05g008950.2.1	Tomato	mitochondrion	51.87	37.7
KRG90880	Soybean	plasma membrane	55.38	37.61
KRG90883	Soybean	plasma membrane	50.33	37.36
KRH35910	Soybean	plasma membrane	55.38	37.33
KRG90879	Soybean	cytosol	50.11	37.07
KRG90889	Soybean	plasma membrane	53.85	37.01
Solyc05g008940.2.1	Tomato	plasma membrane	53.41	36.99
PGSC0003DMT400078437	Potato	plasma membrane	52.09	36.92
Solyc05g008960.2.1	Tomato	plasma membrane	53.85	36.84
Solyc05g008980.2.1	Tomato	plasma membrane	50.77	36.61
PGSC0003DMT400078429	Potato	plasma membrane	53.19	36.56
Solyc05g008990.2.1	Tomato	plasma membrane	52.97	36.4
PGSC0003DMT400078426	Potato	plasma membrane	54.29	36.32
PGSC0003DMT400078441	Potato	plasma membrane	52.75	36.31
KRG90882	Soybean	plasma membrane	49.67	36.1
PGSC0003DMT400078434	Potato	plasma membrane	53.19	36.01
KRH38178	Soybean	plasma membrane	58.9	35.97
Zm00001d008581_P001	Maize	plasma membrane	50.77	35.32
TraesCS3B01G049700.2	Wheat	plasma membrane	48.79	34.85
TraesCS3D01G046900.2	Wheat	plasma membrane	49.23	34.67
TraesCS3A01G048700.1	Wheat	plasma membrane	43.74	34.67
EES02528	Sorghum	mitochondrion, plasma membrane	49.23	34.46
Os01t0136400-01	Rice	plasma membrane	50.33	34.28
TraesCS3D01G045400.2	Wheat	plasma membrane	48.13	33.85
TraesCS3D01G046000.1	Wheat	plasma membrane	48.13	33.85
TraesCS3A01G034300.1	Wheat	plasma membrane	47.91	33.59
KXG22487	Sorghum	plasma membrane	50.77	33.29
Os05t0550800-01	Rice	plasma membrane	49.89	33.19
TraesCS3B01G053800.1	Wheat	vacuole	47.25	33.18
TraesCS1D01G381800.1	Wheat	plasma membrane	50.11	33.14
TraesCS1B01G394900.1	Wheat	plasma membrane	49.67	33.04
TraesCS3A01G034600.1	Wheat	plasma membrane	48.35	32.93
Solyc05g008930.2.1	Tomato	plasma membrane	53.85	32.84
Os01t0689900-03	Rice	plasma membrane	50.11	32.71
HORVU3Hr1G006830.22	Barley	plasma membrane	49.23	32.7
TraesCS3D01G030600.1	Wheat	plastid	48.79	32.65
TraesCS1A01G374700.1	Wheat	plasma membrane	48.13	32.64
TraesCS3A01G262200.1	Wheat	plasma membrane	50.33	32.62
TraesCS3A01G033700.1	Wheat	plastid	48.57	32.6
Os01t0136800-01	Rice	plasma membrane	47.47	32.43
TraesCS3B01G295500.1	Wheat	plasma membrane	50.11	32.43
Zm00001d039926_P001	Maize	vacuole	48.13	32.35
GSMUA_Achr9P21440_001	Banana	plastid	47.03	32.33
TraesCS3D01G262300.2	Wheat	plasma membrane	49.89	32.24
Zm00001d038915_P001	Maize	plasma membrane	49.45	32.19
HORVU3Hr1G064110.3	Barley	plasma membrane	50.11	32.07
Zm00001d011625_P001	Maize	extracellular	50.33	31.89
KXG31948	Sorghum	plasma membrane	47.91	31.69
OQU87357	Sorghum	vacuole	48.79	31.4
HORVU3Hr1G007540.1	Barley	plasma membrane, plastid	39.56	31.09
HORVU1Hr1G083220.3	Barley	plastid	49.23	31.07
TraesCS3A01G033000.1	Wheat	plasma membrane	46.15	30.97
TraesCS3D01G048000.1	Wheat	plasma membrane	45.27	30.88
TraesCSU01G047400.1	Wheat	plasma membrane	45.49	30.71
GSMUA_Achr2P22610_001	Banana	plasma membrane	45.05	28.87
KRH35904	Soybean	plastid	53.19	28.14
VIT_17s0000g03340.t01	Wine grape	plasma membrane	59.12	27.96
Zm00001d039931_P002	Maize	plasma membrane, vacuole	49.01	26.14
VIT_01s0026g01420.t01	Wine grape	plasma membrane	33.85	24.06
VIT_00s0207g00280.t01	Wine grape	plasma membrane	36.04	23.8
VIT_18s0001g11620.t01	Wine grape	plasma membrane	35.82	23.49
VIT_13s0019g02300.t01	Wine grape	plasma membrane	32.31	23.37
VIT_08s0007g00960.t01	Wine grape	plasma membrane	31.43	22.48
VIT_08s0007g04350.t01	Wine grape	plasma membrane	31.43	22.38
Zm00001d043800_P003	Maize	plastid	49.45	21.43
HORVU3Hr1G007590.1	Barley	cytosol, plastid	24.62	15.11

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.20	Gene3D:3.30.200.20	ProteinID:CCB50888	ProteinID:CCB50888.1	ncoils:Coil
UniProt:F6HFM2	EMBL:FN595752	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27005	PANTHER:PTHR27005:SF28	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0002109093
ArrayExpress:VIT_01s0011g03950	EnsemblPlantsGene:VIT_01s0011g03950	EnsemblPlants:VIT_01s0011g03950.t01	RefSeq:XP_002279708	RefSeq:XP_002279708.2	SEG:seg

Description

No Description!

Coordinates

chr1:-:3595451..3600142

Molecular Weight (calculated)

50927.6 Da

IEP (calculated)

6.694

GRAVY (calculated)

-0.304

Length

455 amino acids

Sequence
(BLAST)

001: METSTWTLLL HSPPKKFRQI QKRKHGLKGE EDYPVAVGND NRLKLALGSG ISAGGITILI ICFIIRQRHK RKYASTFLSR NTSSDPSSQP GLETTGTYFG
101: IPIFPYSELE EATYHFVPDR EIGDGGFGTV YHGQLRDGRE VAVKRLYENN YRRVEQFMNE VQILTRLRHR NLVSLYGCTS RHSRELLLVY EFIPNGTVAD
201: HLHGNRADSG LLTWPIRLSI AIETASALCY LHASDVVHRD VKTKNILLDN SFCVKVADFG LSRLFPTDVT HVSTAPQGTP GYVDPEYHLC HQLTDKSDVY
301: SFGVVLIELI SSLPAVDFSR LKHEINLSNY AINKIQKCAF HELIDPHLGF NSDLAVNRMT TLVAELAFRC LQPDKEMRPS MDEVLEILKE IESNRHELEN
401: MDAAADSVGS SMREPPPPSP DCDEVGLLKS VQLMPSPDST TAQWASRSTT PSASA

Best Arabidopsis Sequence Match ( AT1G25390.1 )
(BLAST)

001: METVSVLLFF FLFLLAAEAR STKRTGCKDF TCGEHDFKFP FFRTDMPSRC GLFKLNCSAN IPEIQLEKDG KWYTVKSVSQ ANTITIIDPR LNQSLTTGGC
101: SDLSSFSLPD SPWLKLNTLY KCNNSSRKNG FSYANCRGEG SSLYYNLGDD HDVSGCSPIK TPESWVTPKN GNLSDVNATF SLHIELPGNC FRCHNNGGEC
201: TKVKNNYRCV GANTEPNNYH AEMRLGLGIG GSVILIIILV ALFAVIHRNY RRKDGSELSR DNSKSDVEFS QVFFKIPIFS YKELQAATDN FSKDRLLGDG
301: GFGTVYYGKV RDGREVAVKR LYEHNYRRLE QFMNEIEILT RLHHKNLVSL YGCTSRRSRE LLLVYEFIPN GTVADHLYGE NTPHQGFLTW SMRLSIAIET
401: ASALAYLHAS DIIHRDVKTT NILLDRNFGV KVADFGLSRL LPSDVTHVST APQGTPGYVD PEYHRCYHLT DKSDVYSFGV VLVELISSKP AVDISRCKSE
501: INLSSLAINK IQNHATHELI DQNLGYATNE GVRKMTTMVA ELAFQCLQQD NTMRPTMEQV VHELKGIQNE EQKCPTYDYR EETIIPHPSP PDWGEAALLK
601: NMKFPRSPVS VTDQWTSKST TPNTSAYEF

Arabidopsis Description

LRK10L-1.1LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6K9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.