Factsheet for PGSC0003DMT400014680

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plasma membrane 1
cytosol 2
nucleus 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400040920	Potato	mitochondrion	78.53	72.02
KRH58616	Soybean	cytosol	16.1	70.37
PGSC0003DMT400015323	Potato	cytosol	54.8	64.88
KRH72047	Soybean	cytosol	7.06	64.1
PGSC0003DMT400003222	Potato	plasma membrane	20.34	54.14
PGSC0003DMT400014683	Potato	plasma membrane	100.0	53.07
PGSC0003DMT400014682	Potato	plasma membrane	100.0	52.68
PGSC0003DMT400078440	Potato	plasma membrane	66.1	51.09
Solyc03g119240.2.1	Tomato	plasma membrane	96.89	50.97
PGSC0003DMT400078444	Potato	plasma membrane	64.97	36.86
KRH42522	Soybean	plasma membrane	68.64	36.65
PGSC0003DMT400078448	Potato	cytosol, nucleus, plasma membrane	62.43	35.3
KRH39152	Soybean	endoplasmic reticulum	69.77	35.19
KRH48542	Soybean	endoplasmic reticulum	69.49	34.94
PGSC0003DMT400078441	Potato	plasma membrane	64.97	34.8
PGSC0003DMT400078437	Potato	plasma membrane	62.71	34.58
PGSC0003DMT400078434	Potato	plasma membrane	65.54	34.52
PGSC0003DMT400078426	Potato	plasma membrane	66.1	34.41
PGSC0003DMT400067835	Potato	plasma membrane	67.51	33.95
PGSC0003DMT400078451	Potato	plasma membrane	63.28	33.94
PGSC0003DMT400078429	Potato	plasma membrane	63.28	33.84
PGSC0003DMT400087311	Potato	plasma membrane	36.44	28.73
PGSC0003DMT400008628	Potato	cytosol	43.79	28.7
CDY23537	Canola	plastid	12.43	27.67
VIT_17s0000g03340.t01	Wine grape	plasma membrane	74.01	27.23
PGSC0003DMT400026001	Potato	plasma membrane	45.2	22.76
PGSC0003DMT400058195	Potato	plasma membrane	40.11	22.19
PGSC0003DMT400005156	Potato	plasma membrane	38.42	21.69
PGSC0003DMT400033789	Potato	plasma membrane	37.57	21.11
PGSC0003DMT400014684	Potato	plasma membrane	29.66	15.62
KRH39159	Soybean	extracellular	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.20	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1A4P9	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG403005729	PGSC:PGSC0003DMG403005729
EnsemblPlants:PGSC0003DMT400014680	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27005
PANTHER:PTHR27005:SF31	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000296B643	SEG:seg	:	:	:	:

Description

Wall-associated kinase [Source:PGSC_GENE;Acc:PGSC0003DMG403005729]

Coordinates

chr3:+:58680428..58682559

Molecular Weight (calculated)

39314.4 Da

IEP (calculated)

6.010

GRAVY (calculated)

-0.280

Length

354 amino acids

Sequence
(BLAST)

001: MDPEKSSHYL GVHVFDYNEL EEATNSFDSS KELGEGGFGT VYKGKLRDGR VVAVKRLYEN NYKRVEQFRN EIEILTRLRH RNLVTLYGCT SRHGRELLLV
101: YEYISNGTVA DHLHGEFSKP GSLSWNTRMS ISIETASALA FLHNSEVIHR DVKTNNILLD SNFCVKVADF GLSRLFPTDV THVSTAPQGT PGYVDPQYHE
201: CYQLTSKSDV YSFGVVLIEL ISSLPAVDIC RHRQEINLSN MAINKIQSNA LHELVDSNLG FDSNDLVKLM ITAVAELAFQ CLQNDRDLRP SMPEVLEALL
301: GIQSMDKTAT EIGKPSPGDD AGLLKNHTLS LSPDSVISKW TSSSSSTTHA SSIG

Best Arabidopsis Sequence Match ( AT1G18390.1 )
(BLAST)

001: MSIFFFFISF VVFSVADLPS CFSADQQYEE CRSRNLTCGS GHRVFESTTY PFWGGFNKPK FCGHSSFKLS CEGDQNLTLA IGNITLRVVS ANLEDHKISV
101: ADDSLLDGGC LNIWNFNGKN QFTLDSNTET IDVFVNCSGV APLQISCEES YEDPVTYHVL RSSDSDEGCM KYAEIPMLRS AKDELQRSEL TFVEALRKGF
201: DLRYIMEDKA CRRCIDSGGI CGSALDSESF RCLCADRPHN SSCDDNTNQG KNDKRRRVIV KVLIGASAAV VGLIAASIFW YVYHRRKTKS YRNSSALLPR
301: NISSDPSAKS FDIEKAEELL VGVHIFSYEE LEEATNNFDP SKELGDGGFG TVYYGKLKDG RSVAVKRLYD NNFKRAEQFR NEVEILTGLR HPNLVALFGC
401: SSKQSRDLLL VYEYVANGTL ADHLHGPQAN PSSLPWSIRL KIAVETASAL KYLHASKIIH RDVKSNNILL DQNFNVKVAD FGLSRLFPMD KTHVSTAPQG
501: TPGYVDPDYH LCYQLSNKSD VYSFAVVLME LISSLPAVDI TRPRQEINLS NMAVVKIQNH ELRDMVDPSL GFDTDTRVRQ TVIAVAELAF QCLQSDKDLR
601: PCMSHVQDTL TRIQNNGFGS EMDVVDVNKS GPLVAQSPDS VIVKWDSK

Arabidopsis Description

Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18390]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.