Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G135300.1 | Wheat | nucleus, plastid | 93.56 | 93.21 |
| TraesCS3A01G116200.1 | Wheat | plastid | 90.91 | 91.6 |
| TraesCS3D01G118100.1 | Wheat | nucleus, plastid | 88.64 | 89.31 |
| GSMUA_Achr5P06260_001 | Banana | nucleus | 30.68 | 78.64 |
| CDY72079 | Canola | nucleus | 31.06 | 73.87 |
| Zm00001d039584_P001 | Maize | nucleus | 71.59 | 64.51 |
| OQU86187 | Sorghum | mitochondrion, nucleus | 71.59 | 64.07 |
| Os01t0182700-01 | Rice | nucleus | 67.42 | 63.57 |
| VIT_07s0031g01840.t01 | Wine grape | nucleus | 42.05 | 49.12 |
| KRH43340 | Soybean | nucleus | 42.42 | 47.66 |
| KRH59476 | Soybean | nucleus | 38.64 | 47.22 |
| KRH64133 | Soybean | nucleus | 41.29 | 46.58 |
| KRH53810 | Soybean | nucleus | 41.29 | 46.19 |
| GSMUA_Achr7P13310_001 | Banana | nucleus | 41.29 | 45.8 |
| PGSC0003DMT400050745 | Potato | nucleus | 39.77 | 44.87 |
| Solyc04g051540.2.1 | Tomato | nucleus | 38.64 | 43.59 |
| HORVU2Hr1G093350.3 | Barley | nucleus | 34.09 | 39.13 |
| GSMUA_Achr10P... | Banana | nucleus | 39.39 | 37.82 |
| CDY53184 | Canola | nucleus | 40.53 | 36.52 |
| Bra033616.1-P | Field mustard | nucleus | 40.15 | 36.3 |
| CDX72701 | Canola | nucleus | 38.26 | 35.82 |
| AT4G39410.1 | Thale cress | nucleus | 40.91 | 35.53 |
| Bra011861.1-P | Field mustard | nucleus | 39.77 | 35.23 |
| CDY41978 | Canola | nucleus | 39.77 | 35.23 |
| Bra010683.1-P | Field mustard | nucleus | 39.39 | 35.14 |
| CDY12144 | Canola | nucleus | 39.02 | 34.92 |
| HORVU6Hr1G061940.1 | Barley | nucleus | 29.55 | 34.36 |
| HORVU2Hr1G001780.1 | Barley | nucleus | 21.97 | 29.59 |
| HORVU1Hr1G027700.1 | Barley | nucleus | 18.94 | 25.13 |
| HORVU0Hr1G001430.1 | Barley | plastid | 19.32 | 23.39 |
| HORVU3Hr1G069660.1 | Barley | nucleus | 20.45 | 23.38 |
| HORVU3Hr1G067510.1 | Barley | mitochondrion, plastid | 18.56 | 23.11 |
| HORVU0Hr1G003340.1 | Barley | nucleus | 24.62 | 22.81 |
| HORVU3Hr1G020140.1 | Barley | mitochondrion | 20.08 | 21.54 |
| HORVU1Hr1G092130.1 | Barley | nucleus | 24.24 | 20.71 |
| HORVU1Hr1G088300.1 | Barley | nucleus | 22.35 | 20.49 |
| HORVU3Hr1G050590.3 | Barley | nucleus | 20.08 | 19.92 |
| HORVU1Hr1G081570.1 | Barley | plastid | 22.35 | 19.28 |
| HORVU5Hr1G096420.20 | Barley | mitochondrion, nucleus | 21.59 | 18.87 |
| HORVU1Hr1G080300.1 | Barley | nucleus | 19.7 | 18.64 |
| HORVU3Hr1G060500.1 | Barley | nucleus | 24.62 | 17.86 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A287KDF1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:HORVU3Hr1G021120 | EnsemblPlants:HORVU3Hr1G021120.1 | InterPro:IPR003657 | InterPro:IPR036576 |
| PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF47 | SMART:SM00774 | SUPFAM:SSF118290 |
| UniParc:UPI000B4887D2 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr3H:+:67266734..67272539
Molecular Weight (calculated)
27919.0 Da
IEP (calculated)
10.520
GRAVY (calculated)
-0.557
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MMFPSPGGAA MALAHGQAAS RGATTAGGAA TAITFSFQQP SDPPLNGGLS HHHGLLGYSP LVLDHPTTTT SSSSTIPAAP SLHHLHAPAG AIHPPRSSPP
101: HPWSSEEADR ERQRGKAAVT GMAVNSAPAG GSGGGGRSHG PAAAVAAGMG VGAVRMKKAA GGGAVKARRK VREPRFCFKT MSDVDVLDDG YKWRKYGQKV
201: VKNTQHPRSY YRCTQDKCRV KKRVERLAED PRMVITTYEG RHVHSPSRDD DDAARANAEM SFIW
101: HPWSSEEADR ERQRGKAAVT GMAVNSAPAG GSGGGGRSHG PAAAVAAGMG VGAVRMKKAA GGGAVKARRK VREPRFCFKT MSDVDVLDDG YKWRKYGQKV
201: VKNTQHPRSY YRCTQDKCRV KKRVERLAED PRMVITTYEG RHVHSPSRDD DDAARANAEM SFIW
001: MGAINQGISL FDESQTVINP INTNHLGFFF SFPSHSTLSS SSSSSSSSPS SLVSPFLGHN SLNSFLHNNP SSFISHPQDS INLMTNLPET LISSLSSSKQ
101: RDDHDGFLNL DHHRLTGSIS SQRPLSNPWA WSCQAGYGSS QKNNHGSEID VDDNDDEVGD GGGINDDDNG RHHHHDTPSR HDKHNTASLG VVSSLKMKKL
201: KTRRKVREPR FCFKTLSEVD VLDDGYRWRK YGQKVVKNTQ HPRSYYRCTQ DKCRVKKRVE RLADDPRMVI TTYEGRHLHS PSNHLDDDSL STSHLHPPLS
301: NFFW
101: RDDHDGFLNL DHHRLTGSIS SQRPLSNPWA WSCQAGYGSS QKNNHGSEID VDDNDDEVGD GGGINDDDNG RHHHHDTPSR HDKHNTASLG VVSSLKMKKL
201: KTRRKVREPR FCFKTLSEVD VLDDGYRWRK YGQKVVKNTQ HPRSYYRCTQ DKCRVKKRVE RLADDPRMVI TTYEGRHLHS PSNHLDDDSL STSHLHPPLS
301: NFFW
Arabidopsis Description
WRKY13WRKY13 [Source:UniProtKB/TrEMBL;Acc:A0A178UV80]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.