Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G351600.1 | Wheat | plastid | 66.97 | 54.07 |
| TraesCS1A01G348600.1 | Wheat | plastid | 66.97 | 54.07 |
| AT5G41570.1 | Thale cress | nucleus | 66.06 | 40.22 |
| GSMUA_Achr7P24780_001 | Banana | nucleus | 66.06 | 40.0 |
| KRH06569 | Soybean | nucleus | 70.64 | 39.49 |
| AT5G13080.1 | Thale cress | nucleus, plastid | 52.29 | 39.31 |
| AT1G64000.1 | Thale cress | nucleus | 65.14 | 36.41 |
| GSMUA_Achr6P22920_001 | Banana | mitochondrion | 74.31 | 35.68 |
| TraesCS3D01G280200.1 | Wheat | nucleus | 69.72 | 34.23 |
| TraesCS1B01G363200.1 | Wheat | nucleus | 71.56 | 34.06 |
| TraesCS3A01G280400.1 | Wheat | nucleus | 68.81 | 33.78 |
| Zm00001d012789_P001 | Maize | nucleus | 69.72 | 33.48 |
| AT3G01970.1 | Thale cress | nucleus | 44.95 | 33.33 |
| Zm00001d038761_P002 | Maize | nucleus | 65.14 | 32.57 |
| HORVU3Hr1G069660.1 | Barley | nucleus | 67.89 | 32.03 |
| Zm00001d010805_P001 | Maize | nucleus | 65.14 | 31.0 |
| EES01425 | Sorghum | nucleus | 69.72 | 30.89 |
| Os01t0734000-01 | Rice | nucleus | 70.64 | 30.32 |
| EES19853 | Sorghum | nucleus, plastid | 66.06 | 29.88 |
| HORVU1Hr1G081570.1 | Barley | plastid | 71.56 | 25.49 |
| AT5G26170.1 | Thale cress | nucleus | 38.53 | 24.28 |
| AT2G44745.1 | Thale cress | nucleus | 47.71 | 23.85 |
| AT5G64810.1 | Thale cress | nucleus | 35.78 | 20.1 |
| AT1G69310.2 | Thale cress | nucleus | 51.38 | 19.51 |
| AT1G29860.1 | Thale cress | nucleus | 47.71 | 18.44 |
| AT3G62340.1 | Thale cress | nucleus | 45.87 | 18.05 |
| AT4G18170.1 | Thale cress | nucleus | 47.71 | 16.35 |
| AT4G39410.1 | Thale cress | nucleus | 44.95 | 16.12 |
| AT5G46350.1 | Thale cress | nucleus | 47.71 | 15.95 |
| AT2G47260.1 | Thale cress | nucleus | 46.79 | 15.13 |
| AT5G49520.1 | Thale cress | nucleus | 54.13 | 14.79 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:819220 | ProteinID:AAC62892.1 | ProteinID:AEC10646.1 | ProteinID:AEC10647.2 |
| EMBL:AF404861 | EMBL:AF442391 | EMBL:AK117931 | ArrayExpress:AT2G46130 | EnsemblPlantsGene:AT2G46130 | RefSeq:AT2G46130 |
| TAIR:AT2G46130 | RefSeq:AT2G46130-TAIR-G | EnsemblPlants:AT2G46130.1 | TAIR:AT2G46130.1 | EMBL:BT004701 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| RefSeq:NP_182136.2 | RefSeq:NP_850446.2 | PFAM:PF03106 | PO:PO:0007611 | PO:PO:0009046 | PO:PO:0020100 |
| PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF7 | UniProt:Q8GY11 | SMART:SM00774 | SUPFAM:SSF118290 |
| UniParc:UPI000000C437 | Symbol:WRKY43 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | : | : |
Description
WRKY43Probable WRKY transcription factor 43 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY11]
Coordinates
chr2:+:18957212..18957925
Molecular Weight (calculated)
12952.5 Da
IEP (calculated)
9.992
GRAVY (calculated)
-0.935
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGLVDSSRD KKMKNPRFSF RTKSDADILD DGYRWRKYGQ KSVKNSLYPR SYYRCTQHMC NVKKQVQRLS KETSIVETTY EGIHNHPCEE LMQTLTPLLH
101: QLQFLSKFT
101: QLQFLSKFT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.