Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25554 | Canola | nucleus | 96.3 | 96.81 |
| CDY34393 | Canola | nucleus | 95.77 | 95.26 |
| Bra027768.1-P | Field mustard | nucleus | 86.77 | 87.7 |
| AT1G64000.1 | Thale cress | nucleus | 85.19 | 82.56 |
| Bra025490.1-P | Field mustard | nucleus | 63.49 | 68.97 |
| TraesCS1A01G348600.1 | Wheat | plastid | 41.27 | 57.78 |
| TraesCS1D01G351600.1 | Wheat | plastid | 41.27 | 57.78 |
| GSMUA_Achr7P24780_001 | Banana | nucleus | 44.97 | 47.22 |
| Bra006178.1-P | Field mustard | nucleus | 35.45 | 45.58 |
| Bra008858.1-P | Field mustard | nucleus | 34.92 | 44.9 |
| KRH00862 | Soybean | cytosol | 44.97 | 44.27 |
| VIT_15s0046g02150.t01 | Wine grape | nucleus, plastid | 45.5 | 42.79 |
| KRH40372 | Soybean | cytosol | 43.39 | 42.71 |
| Bra040557.1-P | Field mustard | nucleus | 31.75 | 41.67 |
| Zm00001d038761_P002 | Maize | nucleus | 44.44 | 38.53 |
| Zm00001d012789_P001 | Maize | nucleus | 46.03 | 38.33 |
| Zm00001d010805_P001 | Maize | nucleus | 45.5 | 37.55 |
| TraesCS3D01G280200.1 | Wheat | nucleus | 43.92 | 37.39 |
| PGSC0003DMT400032090 | Potato | nucleus | 44.97 | 37.28 |
| TraesCS3A01G280400.1 | Wheat | nucleus | 42.86 | 36.49 |
| Solyc08g081630.1.1 | Tomato | nucleus | 44.44 | 36.36 |
| EES01425 | Sorghum | nucleus | 47.09 | 36.18 |
| GSMUA_Achr6P22920_001 | Banana | mitochondrion | 42.86 | 35.68 |
| TraesCS1B01G363200.1 | Wheat | nucleus | 42.86 | 35.37 |
| EES19853 | Sorghum | nucleus, plastid | 44.97 | 35.27 |
| HORVU3Hr1G069660.1 | Barley | nucleus | 42.33 | 34.63 |
| Os01t0734000-01 | Rice | nucleus | 44.97 | 33.46 |
| Bra020546.1-P | Field mustard | nucleus | 26.45 | 29.76 |
| Bra037796.1-P | Field mustard | nucleus | 25.93 | 29.17 |
| Bra009885.1-P | Field mustard | nucleus | 25.4 | 27.27 |
| HORVU1Hr1G081570.1 | Barley | plastid | 43.39 | 26.8 |
| Bra000362.1-P | Field mustard | nucleus | 29.63 | 26.67 |
| Bra004864.1-P | Field mustard | nucleus | 29.1 | 25.58 |
| Bra036563.1-P | Field mustard | nucleus | 20.11 | 24.05 |
| Bra031900.1-P | Field mustard | nucleus | 24.34 | 23.35 |
| Bra024328.1-P | Field mustard | nucleus | 24.34 | 22.33 |
| Bra032340.1-P | Field mustard | nucleus | 29.63 | 20.51 |
| Bra030178.1-P | Field mustard | nucleus | 29.63 | 20.22 |
| Bra033616.1-P | Field mustard | nucleus | 30.16 | 19.52 |
| Bra010683.1-P | Field mustard | nucleus | 30.16 | 19.26 |
| Bra011861.1-P | Field mustard | nucleus | 30.16 | 19.13 |
| Bra040926.1-P | Field mustard | nucleus | 29.1 | 18.71 |
| Bra007674.1-P | Field mustard | nucleus | 28.57 | 18.12 |
| Bra004370.1-P | Field mustard | nucleus | 28.04 | 18.03 |
| Bra004466.1-P | Field mustard | nucleus | 30.16 | 17.87 |
| Bra038313.1-P | Field mustard | nucleus | 28.04 | 17.73 |
| Bra004002.1-P | Field mustard | nucleus | 26.98 | 17.65 |
| Bra013289.1-P | Field mustard | nucleus | 28.57 | 17.53 |
| Bra021393.1-P | Field mustard | nucleus | 29.63 | 17.34 |
| Bra012614.1-P | Field mustard | nucleus | 28.04 | 16.99 |
| Bra025021.1-P | Field mustard | nucleus | 28.57 | 16.72 |
| Bra037637.1-P | Field mustard | nucleus | 15.87 | 16.57 |
| Bra036138.1-P | Field mustard | nucleus | 30.69 | 16.43 |
| Bra022033.1-P | Field mustard | nucleus | 27.51 | 16.4 |
| Bra017561.1-P | Field mustard | nucleus | 25.93 | 15.26 |
| Bra020628.1-P | Field mustard | nucleus | 30.69 | 14.8 |
| Bra010032.1-P | Field mustard | nucleus | 31.22 | 14.79 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EnsemblPlantsGene:Bra027675 | EnsemblPlants:Bra027675.1 | EnsemblPlants:Bra027675.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M4EFW2 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF7 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI0002542390 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
AT1G64000 (E=2e-067) WRKY56, ATWRKY56 | WRKY56; transcription factor
Coordinates
chrA09:-:6982436..6987161
Molecular Weight (calculated)
21305.0 Da
IEP (calculated)
7.234
GRAVY (calculated)
-0.844
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGVDDKNPT LTLEEGENNP FSSFDDKTLM MMDPSLMFSS DMGPSSSCSP ASFHMSAQPD NFQHAEGGDA VEIGGLSDHN KNNKGKGKRS SAMPRIAFHT
101: RSDDDVLDDG YRWRKYGQKS VKNNAHPRSY YRCTYHTCNV KKQVQRLAKD PKVVVTTYEG VHNHPCEKLM ETLSPLLRQL QFLTRVSDL
101: RSDDDVLDDG YRWRKYGQKS VKNNAHPRSY YRCTYHTCNV KKQVQRLAKD PKVVVTTYEG VHNHPCEKLM ETLSPLLRQL QFLTRVSDL
001: MEGVDNTNPM LTLEEGENNN PFSSLDDKTL MMMAPSLIFS GDVGPSSSSC TPAGYHLSAQ LENFRGGGGE MGGLVSNNSN NSDHNKNCNK GKGKRTLAMQ
101: RIAFHTRSDD DVLDDGYRWR KYGQKSVKNN AHPRSYYRCT YHTCNVKKQV QRLAKDPNVV VTTYEGVHNH PCEKLMETLS PLLRQLQFLS RVSDL
101: RIAFHTRSDD DVLDDGYRWR KYGQKSVKNN AHPRSYYRCT YHTCNVKKQV QRLAKDPNVV VTTYEGVHNH PCEKLMETLS PLLRQLQFLS RVSDL
Arabidopsis Description
WRKY56At1g64000 [Source:UniProtKB/TrEMBL;Acc:Q29PS1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.