Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013289.1-P | Field mustard | nucleus | 99.68 | 99.68 |
| CDX99495 | Canola | nucleus | 96.75 | 95.51 |
| CDY01523 | Canola | nucleus | 85.39 | 84.29 |
| CDY09083 | Canola | nucleus | 84.74 | 83.39 |
| CDX90417 | Canola | nucleus | 84.74 | 83.39 |
| CDY08894 | Canola | nucleus | 78.57 | 82.31 |
| CDX76541 | Canola | nucleus | 78.25 | 81.97 |
| AT4G18170.1 | Thale cress | nucleus | 82.47 | 79.87 |
| CDY03224 | Canola | nucleus | 57.47 | 55.14 |
| CDY35159 | Canola | nucleus | 57.14 | 54.83 |
| CDY72079 | Canola | nucleus | 19.48 | 54.05 |
| CDY43969 | Canola | nucleus | 55.52 | 53.94 |
| CDY33471 | Canola | nucleus | 56.49 | 53.87 |
| CDX77655 | Canola | nucleus | 56.49 | 53.87 |
| VIT_10s0003g02810.t01 | Wine grape | nucleus | 44.48 | 42.95 |
| KRH58435 | Soybean | nucleus | 49.35 | 42.46 |
| CDX87722 | Canola | nucleus | 42.53 | 41.85 |
| CDY26310 | Canola | nucleus | 36.36 | 41.03 |
| KRH42308 | Soybean | nucleus | 49.03 | 40.7 |
| CDX99859 | Canola | nucleus | 35.71 | 40.29 |
| CDX77096 | Canola | nucleus | 18.83 | 40.28 |
| CDY43194 | Canola | nucleus | 36.04 | 40.07 |
| CDX98155 | Canola | nucleus | 36.04 | 39.08 |
| CDX78504 | Canola | nucleus | 18.51 | 38.78 |
| CDX70492 | Canola | nucleus | 18.51 | 38.78 |
| CDX97223 | Canola | nucleus | 18.18 | 38.1 |
| CDX69672 | Canola | nucleus | 18.18 | 38.1 |
| GSMUA_Achr6P27090_001 | Banana | nucleus | 35.39 | 36.33 |
| OQU78504 | Sorghum | nucleus | 30.52 | 35.88 |
| CDX83415 | Canola | nucleus, plastid | 21.1 | 34.57 |
| CDY24990 | Canola | nucleus | 18.83 | 34.32 |
| CDX95615 | Canola | nucleus, plastid | 21.1 | 34.21 |
| CDY05537 | Canola | nucleus | 18.51 | 33.93 |
| CDY48151 | Canola | nucleus | 18.83 | 33.92 |
| CDX87064 | Canola | nucleus | 18.83 | 33.92 |
| GSMUA_Achr9P06750_001 | Banana | nucleus | 31.17 | 32.54 |
| CDY52627 | Canola | nucleus | 18.51 | 32.39 |
| CDX88219 | Canola | nucleus | 18.51 | 32.39 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.87 | 31.94 |
| CDY37794 | Canola | nucleus | 31.49 | 30.99 |
| CDY30483 | Canola | nucleus | 22.08 | 30.91 |
| CDY71963 | Canola | nucleus | 21.43 | 30.84 |
| CDY23453 | Canola | nucleus | 21.75 | 30.73 |
| CDY48258 | Canola | nucleus | 21.43 | 30.7 |
| CDX80094 | Canola | nucleus | 31.49 | 30.7 |
| CDY44466 | Canola | nucleus | 17.53 | 30.68 |
| CDY39732 | Canola | nucleus | 17.21 | 30.11 |
| CDY51420 | Canola | nucleus | 31.17 | 29.63 |
| CDY18694 | Canola | nucleus | 16.56 | 29.48 |
| CDY38208 | Canola | nucleus | 17.53 | 29.03 |
| TraesCS1B01G453200.1 | Wheat | nucleus | 26.95 | 28.92 |
| CDY27500 | Canola | nucleus | 31.17 | 28.83 |
| TraesCS1D01G430000.1 | Wheat | nucleus | 27.6 | 28.72 |
| TraesCS1A01G421800.1 | Wheat | nucleus | 26.62 | 28.67 |
| CDY54139 | Canola | nucleus | 27.6 | 28.52 |
| CDX95947 | Canola | nucleus | 26.95 | 28.23 |
| CDY40910 | Canola | nucleus | 26.95 | 28.23 |
| CDY04276 | Canola | nucleus | 26.3 | 28.22 |
| CDY25554 | Canola | nucleus | 17.21 | 28.19 |
| Os05t0583000-01 | Rice | nucleus | 30.84 | 28.19 |
| TraesCS1D01G429800.1 | Wheat | nucleus | 26.3 | 28.12 |
| CDY07352 | Canola | nucleus | 26.3 | 28.03 |
| CDY55479 | Canola | nucleus | 16.88 | 27.96 |
| CDY34393 | Canola | nucleus | 17.21 | 27.89 |
| HORVU1Hr1G092130.1 | Barley | nucleus | 27.92 | 27.83 |
| TraesCS1D01G429900.1 | Wheat | nucleus | 27.6 | 27.69 |
| TraesCS1B01G453300.1 | Wheat | nucleus | 27.92 | 27.56 |
| CDY11416 | Canola | nucleus | 26.62 | 27.52 |
| TraesCS1A01G421900.1 | Wheat | nucleus | 18.51 | 27.4 |
| CDY72613 | Canola | nucleus | 28.25 | 26.93 |
| CDY50313 | Canola | nucleus | 26.95 | 26.86 |
| CDX81259 | Canola | nucleus | 17.21 | 26.63 |
| CDX76630 | Canola | nucleus | 25.0 | 25.93 |
| CDY05620 | Canola | nucleus | 31.82 | 25.06 |
| CDY53184 | Canola | nucleus | 23.7 | 24.91 |
| CDX72701 | Canola | nucleus | 22.73 | 24.82 |
| CDY41978 | Canola | nucleus | 23.7 | 24.5 |
| CDY08849 | Canola | nucleus | 16.23 | 24.27 |
| CDY14512 | Canola | nucleus | 16.23 | 24.27 |
| CDX85413 | Canola | nucleus | 31.17 | 24.06 |
| CDY12144 | Canola | nucleus | 22.4 | 23.39 |
| CDY31301 | Canola | nucleus | 14.61 | 22.84 |
| CDY46824 | Canola | nucleus | 14.29 | 15.17 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078CQ29 | EnsemblPlants:CDX78832 | ProteinID:CDX78832 | ProteinID:CDX78832.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00131304001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PIRSF:PIRSF038130 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF56 | SMART:SM00774 | SUPFAM:SSF118290 | InterPro:TF_WRKY_IIc | UniParc:UPI0004EDF99A |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
BnaA01g08990D
Coordinates
chrLK031816:+:323002..325452
Molecular Weight (calculated)
34439.6 Da
IEP (calculated)
7.248
GRAVY (calculated)
-0.871
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNESKDLYS YQYLSSLSLY ELMNLPTSTP SSYGNNGFVP SSYSLADCFQ SSPGAAYDSL LHKTLGVSPS SSEVFNSLVD QESKHDVTND VIGETPTRVS
101: ASSSSSEADH PGEDSGKSQR KRELVGYGGE ENRISKKVGK TKKEEKKQRE PRVSFMTKSE VDHLEDGYRW RKYGQKAVKN SIYPRSYYRC TTQRCNVKKR
201: VERSFQDPTV VITTYEGQHN HPLPTNLRGS SAAAAMYSAD FMTPGSFTHD MFRSSAYTSG GSALDYGYEQ SSYGSVNANP NAHQEYRQGG EYELLKEIFP
301: SIFFKQEP
101: ASSSSSEADH PGEDSGKSQR KRELVGYGGE ENRISKKVGK TKKEEKKQRE PRVSFMTKSE VDHLEDGYRW RKYGQKAVKN SIYPRSYYRC TTQRCNVKKR
201: VERSFQDPTV VITTYEGQHN HPLPTNLRGS SAAAAMYSAD FMTPGSFTHD MFRSSAYTSG GSALDYGYEQ SSYGSVNANP NAHQEYRQGG EYELLKEIFP
301: SIFFKQEP
001: MSNETRDLYN YQYPSSFSLH EMMNLPTSNP SSYGNLPSQN GFNPSTYSFT DCLQSSPAAY ESLLQKTFGL SPSSSEVFNS SIDQEPNRDV TNDVINGGAC
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP
Arabidopsis Description
WRKY28WRKY28 [Source:UniProtKB/TrEMBL;Acc:A0A178V3M3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.