Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P06260_001 | Banana | nucleus | 18.06 | 50.49 |
| GSMUA_Achr3P20450_001 | Banana | cytosol, nucleus, plastid | 15.97 | 48.94 |
| GSMUA_Achr4P17890_001 | Banana | nucleus | 18.75 | 48.21 |
| GSMUA_Achr7P06860_001 | Banana | nucleus | 18.75 | 46.15 |
| GSMUA_Achr3P31310_001 | Banana | nucleus | 35.76 | 44.98 |
| GSMUA_Achr9P07230_001 | Banana | mitochondrion | 17.71 | 44.35 |
| GSMUA_Achr7P00580_001 | Banana | cytosol, nucleus, plastid | 22.92 | 44.3 |
| GSMUA_Achr6P34870_001 | Banana | nucleus | 22.57 | 43.92 |
| GSMUA_Achr6P27090_001 | Banana | nucleus | 40.28 | 38.67 |
| GSMUA_Achr9P06750_001 | Banana | nucleus | 38.89 | 37.97 |
| OQU78504 | Sorghum | nucleus | 34.03 | 37.4 |
| TraesCS1A01G421900.1 | Wheat | nucleus | 26.04 | 36.06 |
| Os05t0583000-01 | Rice | nucleus | 42.01 | 35.91 |
| GSMUA_Achr9P29350_001 | Banana | nucleus | 19.79 | 35.85 |
| GSMUA_Achr1P04770_001 | Banana | nucleus | 36.81 | 35.81 |
| TraesCS1D01G430000.1 | Wheat | nucleus | 36.81 | 35.81 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.88 | 35.59 |
| GSMUA_Achr9P01400_001 | Banana | nucleus | 22.22 | 35.36 |
| GSMUA_Achr4P08880_001 | Banana | nucleus | 20.14 | 35.15 |
| VIT_10s0003g02810.t01 | Wine grape | nucleus | 38.89 | 35.11 |
| TraesCS1D01G429800.1 | Wheat | nucleus | 35.07 | 35.07 |
| TraesCS1A01G421800.1 | Wheat | nucleus | 34.72 | 34.97 |
| VIT_12s0028g00270.t01 | Wine grape | nucleus | 37.5 | 34.73 |
| TraesCS1B01G453200.1 | Wheat | nucleus | 34.38 | 34.49 |
| GSMUA_Achr6P22160_001 | Banana | nucleus | 41.32 | 33.9 |
| GSMUA_Achr7P24780_001 | Banana | nucleus | 21.18 | 33.89 |
| TraesCS1D01G429900.1 | Wheat | nucleus | 36.11 | 33.88 |
| HORVU1Hr1G092130.1 | Barley | nucleus | 36.11 | 33.66 |
| Bra030178.1-P | Field mustard | nucleus | 31.94 | 33.21 |
| TraesCS1B01G453300.1 | Wheat | nucleus | 35.76 | 33.01 |
| CDX76541 | Canola | nucleus | 33.68 | 32.99 |
| Bra040926.1-P | Field mustard | nucleus | 33.68 | 32.99 |
| CDY43194 | Canola | nucleus | 31.6 | 32.85 |
| GSMUA_Achr4P23360_001 | Banana | nucleus | 29.86 | 32.82 |
| CDX98155 | Canola | nucleus | 32.29 | 32.75 |
| AT1G29860.1 | Thale cress | nucleus | 31.6 | 32.27 |
| Bra032340.1-P | Field mustard | nucleus | 30.56 | 32.23 |
| CDY26310 | Canola | nucleus | 30.56 | 32.23 |
| CDY08894 | Canola | nucleus | 32.64 | 31.97 |
| GSMUA_Achr7P25400_001 | Banana | nucleus | 36.11 | 31.9 |
| CDX99859 | Canola | nucleus | 30.21 | 31.87 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.99 | 31.56 |
| GSMUA_Achr6P06360_001 | Banana | nucleus | 20.14 | 31.52 |
| Bra012614.1-P | Field mustard | nucleus | 33.68 | 31.09 |
| CDY01523 | Canola | nucleus | 33.68 | 31.09 |
| CDY09083 | Canola | nucleus | 33.68 | 30.99 |
| CDX90417 | Canola | nucleus | 33.68 | 30.99 |
| KRH73639 | Soybean | nucleus | 36.11 | 30.86 |
| GSMUA_Achr7P23980_001 | Banana | mitochondrion | 18.06 | 30.77 |
| KRH14487 | Soybean | nucleus | 35.76 | 30.75 |
| GSMUA_Achr4P02800_001 | Banana | nucleus | 35.07 | 30.7 |
| GSMUA_Achr8P26240_001 | Banana | nucleus | 18.06 | 30.23 |
| AT4G18170.1 | Thale cress | nucleus | 33.33 | 30.19 |
| Bra013289.1-P | Field mustard | nucleus | 31.94 | 29.87 |
| CDX78832 | Canola | nucleus | 31.94 | 29.87 |
| CDX99495 | Canola | nucleus | 31.94 | 29.49 |
| GSMUA_Achr4P14990_001 | Banana | nucleus | 33.68 | 29.22 |
| KRH58435 | Soybean | nucleus | 35.76 | 28.77 |
| GSMUA_Achr8P10740_001 | Banana | nucleus | 30.9 | 28.43 |
| KRH42308 | Soybean | nucleus | 36.46 | 28.3 |
| CDY43969 | Canola | nucleus | 30.9 | 28.08 |
| Bra022033.1-P | Field mustard | nucleus | 30.9 | 28.08 |
| GSMUA_Achr6P22920_001 | Banana | mitochondrion | 21.53 | 27.31 |
| AT5G46350.1 | Thale cress | nucleus | 30.9 | 27.3 |
| CDY03224 | Canola | nucleus | 29.86 | 26.79 |
| CDY35159 | Canola | nucleus | 29.51 | 26.48 |
| CDY33471 | Canola | nucleus | 29.51 | 26.32 |
| CDX77655 | Canola | nucleus | 29.51 | 26.32 |
| Bra025021.1-P | Field mustard | nucleus | 29.51 | 26.32 |
| Bra017561.1-P | Field mustard | nucleus | 29.17 | 26.17 |
| GSMUA_Achr7P13310_001 | Banana | nucleus | 21.53 | 26.05 |
| GSMUA_Achr7P09680_001 | Banana | nucleus | 18.06 | 25.74 |
| CDX87722 | Canola | nucleus | 27.43 | 25.24 |
| GSMUA_Achr4P07920_001 | Banana | nucleus | 38.54 | 22.79 |
| GSMUA_Achr10P... | Banana | nucleus | 19.44 | 20.36 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_AchrUn_randomG17930_001 | EnsemblPlants:GSMUA_AchrUn_randomP17930_001 | EnsemblPlants:GSMUA_AchrUn_randomT17930_001 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M0UA52 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF56 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI00029588DD | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
DNA-binding WRKY domain-containing protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG17930_001]
Coordinates
chrchrUn_random:-:84865014..84868835
Molecular Weight (calculated)
31813.7 Da
IEP (calculated)
7.474
GRAVY (calculated)
-1.020
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGDEADHYG RRHDHFPFHG EPSSVSPQKP GSSSSGAANS LQVSDLKTLS PFLSFTDYLH DSPVDFHNLV PAFDDPSPRS HLLGGAHEPC ELLAGGDGTA
101: PVTPNSSMTS SSTEAAGEED LGARKTDRPK QEEGEEKQAA GGEEGRDKFK KVNKPRKKGE RRQREPRIAF MTKSEVDHLE DGYRWRKYGQ KAVKNSPYPR
201: SYYRCTAPKC NVKKRVERSY QDSSVVVTTY EGQHTHHSPV NLRLAPSPPT TSFRGDLLSH QPSPVNSNIN QQAEGHGLLQ DIVPTLEK
101: PVTPNSSMTS SSTEAAGEED LGARKTDRPK QEEGEEKQAA GGEEGRDKFK KVNKPRKKGE RRQREPRIAF MTKSEVDHLE DGYRWRKYGQ KAVKNSPYPR
201: SYYRCTAPKC NVKKRVERSY QDSSVVVTTY EGQHTHHSPV NLRLAPSPPT TSFRGDLLSH QPSPVNSNIN QQAEGHGLLQ DIVPTLEK
001: MSNETRDLYN YQYPSSFSLH EMMNLPTSNP SSYGNLPSQN GFNPSTYSFT DCLQSSPAAY ESLLQKTFGL SPSSSEVFNS SIDQEPNRDV TNDVINGGAC
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP
Arabidopsis Description
WRKY28WRKY28 [Source:UniProtKB/TrEMBL;Acc:A0A178V3M3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.