Factsheet for GSMUA_Achr7P00580_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P34870_001	Banana	nucleus	53.02	53.38
GSMUA_Achr3P20450_001	Banana	cytosol, nucleus, plastid	31.54	50.0
GSMUA_Achr4P17890_001	Banana	nucleus	34.9	46.43
GSMUA_Achr5P06260_001	Banana	nucleus	31.54	45.63
GSMUA_Achr7P06860_001	Banana	nucleus	34.23	43.59
GSMUA_Achr9P07230_001	Banana	mitochondrion	31.54	40.87
GSMUA_Achr4P23360_001	Banana	nucleus	56.38	32.06
GSMUA_Achr7P23980_001	Banana	mitochondrion	32.89	28.99
GSMUA_Achr9P29350_001	Banana	nucleus	30.87	28.93
GSMUA_Achr7P24780_001	Banana	nucleus	34.23	28.33
GSMUA_AchrUn_...	Banana	nucleus	32.21	27.12
GSMUA_Achr3P31310_001	Banana	nucleus	41.61	27.07
GSMUA_Achr9P01400_001	Banana	nucleus	32.89	27.07
GSMUA_Achr4P08880_001	Banana	nucleus	28.86	26.06
GSMUA_Achr6P06360_001	Banana	nucleus	30.87	25.0
GSMUA_Achr8P26240_001	Banana	nucleus	28.86	25.0
GSMUA_Achr7P09680_001	Banana	nucleus	31.54	23.27
GSMUA_AchrUn_...	Banana	nucleus	46.98	23.26
GSMUA_AchrUn_...	Banana	nucleus	44.3	22.92
GSMUA_Achr6P22920_001	Banana	mitochondrion	33.56	22.03
GSMUA_Achr6P27090_001	Banana	nucleus	43.62	21.67
GSMUA_Achr1P04770_001	Banana	nucleus	42.95	21.62
GSMUA_Achr7P25400_001	Banana	nucleus	45.64	20.86
GSMUA_Achr8P10740_001	Banana	nucleus	43.62	20.77
GSMUA_Achr6P22160_001	Banana	nucleus	47.65	20.23
GSMUA_Achr4P02800_001	Banana	nucleus	44.3	20.06
GSMUA_Achr7P13310_001	Banana	nucleus	31.54	19.75
GSMUA_Achr4P14990_001	Banana	nucleus	43.62	19.58
GSMUA_Achr9P06750_001	Banana	nucleus	38.26	19.32
GSMUA_Achr10P...	Banana	nucleus	30.2	16.36
GSMUA_Achr4P07920_001	Banana	nucleus	46.31	14.17

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr7G00580_001	EnsemblPlants:GSMUA_Achr7P00580_001	EnsemblPlants:GSMUA_Achr7T00580_001	InterPro:IPR003657	InterPro:IPR036576
UniProt:M0TDJ8	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF83	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000295B2EF	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

Probable WRKY transcription factor 57 [Source:GMGC_GENE;Acc:GSMUA_Achr7G00580_001]

Coordinates

chr7:-:482129..483037

Molecular Weight (calculated)

16868.0 Da

IEP (calculated)

9.252

GRAVY (calculated)

-0.799

Length

149 amino acids

Sequence
(BLAST)

001: MTKSEVDHLE DGYRWRKYGQ KVVKNSPFPR SYYRCTHSKC NVKKRVERCS QDPSIVITTY EGQHCHHTVS ASPRTDASPS QQLASSAPQI CLPAMQFHRN
101: PPVLPVIRPG QVIGPRYEER TSMAMERTSP APTDEGLLDD VVPSGMRRT

Best Arabidopsis Sequence Match ( AT1G69310.1 )
(BLAST)

001: MNDPDNPDLS NDDSAWRELT LTAQDSDFFD RDTSNILSDF GWNLHHSSDH PHSLRFDSDL TQTTGVKPTT VTSSCSSSAA VSVAVTSTNN NPSATSSSSE
101: DPAENSTASA EKTPPPETPV KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSDDP SIVITTYEGQ
201: HCHQTIGFPR GGILTAHDPH SFTSHHHLPP PLPNPYYYQE LLHQLHRDNN APSPRLPRPT TEDTPAVSTP SEEGLLGDIV PQTMRNP

Arabidopsis Description

WRKY57At1g69310 [Source:UniProtKB/TrEMBL;Acc:Q147N6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.