Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0583000-01 | Rice | nucleus | 50.0 | 38.87 |
| TraesCS1D01G430000.1 | Wheat | nucleus | 40.46 | 35.81 |
| TraesCS1A01G421800.1 | Wheat | nucleus | 38.93 | 35.66 |
| HORVU1Hr1G092130.1 | Barley | nucleus | 41.6 | 35.28 |
| TraesCS1B01G453200.1 | Wheat | nucleus | 38.55 | 35.19 |
| TraesCS1D01G429900.1 | Wheat | nucleus | 40.84 | 34.85 |
| TraesCS1D01G429800.1 | Wheat | nucleus | 38.17 | 34.72 |
| TraesCS1B01G453300.1 | Wheat | nucleus | 41.22 | 34.62 |
| GSMUA_AchrUn_... | Banana | nucleus | 37.4 | 34.03 |
| EES01107 | Sorghum | nucleus | 45.8 | 33.24 |
| TraesCS1A01G421900.1 | Wheat | nucleus | 25.57 | 32.21 |
| Bra030178.1-P | Field mustard | nucleus | 33.97 | 32.13 |
| CDY43194 | Canola | nucleus | 33.59 | 31.77 |
| AT1G29860.1 | Thale cress | nucleus | 33.97 | 31.56 |
| CDY26310 | Canola | nucleus | 32.82 | 31.5 |
| Bra032340.1-P | Field mustard | nucleus | 32.82 | 31.5 |
| CDY08894 | Canola | nucleus | 34.73 | 30.95 |
| CDX76541 | Canola | nucleus | 34.35 | 30.61 |
| Bra040926.1-P | Field mustard | nucleus | 34.35 | 30.61 |
| CDX78832 | Canola | nucleus | 35.88 | 30.52 |
| Bra013289.1-P | Field mustard | nucleus | 35.88 | 30.52 |
| CDX99495 | Canola | nucleus | 36.26 | 30.45 |
| CDX99859 | Canola | nucleus | 31.68 | 30.4 |
| VIT_10s0003g02810.t01 | Wine grape | nucleus | 36.64 | 30.09 |
| CDX98155 | Canola | nucleus | 32.44 | 29.93 |
| VIT_12s0028g00270.t01 | Wine grape | nucleus | 35.11 | 29.58 |
| CDY01523 | Canola | nucleus | 35.11 | 29.49 |
| Bra012614.1-P | Field mustard | nucleus | 35.11 | 29.49 |
| CDX90417 | Canola | nucleus | 35.11 | 29.39 |
| CDY09083 | Canola | nucleus | 35.11 | 29.39 |
| AT4G18170.1 | Thale cress | nucleus | 35.5 | 29.25 |
| KXG34273 | Sorghum | mitochondrion | 29.01 | 27.94 |
| KRH14487 | Soybean | nucleus | 35.11 | 27.46 |
| KRH58435 | Soybean | nucleus | 37.4 | 27.37 |
| KRH73639 | Soybean | nucleus | 34.35 | 26.71 |
| KRH42308 | Soybean | nucleus | 37.4 | 26.42 |
| CDY03224 | Canola | nucleus | 32.06 | 26.17 |
| Bra017561.1-P | Field mustard | nucleus | 31.68 | 25.86 |
| CDY35159 | Canola | nucleus | 31.68 | 25.86 |
| EES03393 | Sorghum | nucleus | 40.08 | 25.61 |
| Bra022033.1-P | Field mustard | nucleus | 30.92 | 25.55 |
| CDY43969 | Canola | nucleus | 30.92 | 25.55 |
| EES19157 | Sorghum | nucleus | 19.85 | 25.24 |
| AT5G46350.1 | Thale cress | nucleus | 31.3 | 25.15 |
| Bra025021.1-P | Field mustard | nucleus | 30.92 | 25.08 |
| CDX77655 | Canola | nucleus | 30.92 | 25.08 |
| CDY33471 | Canola | nucleus | 30.92 | 25.08 |
| EER90854 | Sorghum | nucleus | 31.68 | 25.08 |
| EES08501 | Sorghum | nucleus | 21.37 | 24.89 |
| KXG31104 | Sorghum | nucleus | 22.52 | 24.79 |
| EES19853 | Sorghum | nucleus, plastid | 22.52 | 24.48 |
| EES18577 | Sorghum | plastid | 20.23 | 24.2 |
| EES00970 | Sorghum | nucleus | 19.85 | 24.07 |
| CDX87722 | Canola | nucleus | 28.63 | 23.96 |
| EES01425 | Sorghum | nucleus | 20.99 | 22.36 |
| KXG33244 | Sorghum | plastid | 19.08 | 22.22 |
| EES18690 | Sorghum | nucleus | 35.88 | 22.17 |
| KXG26824 | Sorghum | nucleus | 21.76 | 21.19 |
| EES00157 | Sorghum | nucleus | 19.47 | 19.62 |
| OQU86187 | Sorghum | mitochondrion, nucleus | 20.61 | 18.31 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A1Z5R3Z8 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | EnsemblPlants:OQU78504 | ProteinID:OQU78504 |
| ProteinID:OQU78504.1 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF83 | SMART:SM00774 |
| EnsemblPlantsGene:SORBI_3009G247300 | SUPFAM:SSF118290 | UniParc:UPI000B8BA7D5 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg |
Description
hypothetical protein
Coordinates
chr9:-:58261832..58265060
Molecular Weight (calculated)
28369.1 Da
IEP (calculated)
8.202
GRAVY (calculated)
-0.832
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVQLSDSRR DADADGQMAG AAAVTPANSS VLSSSSCEAG ADANDDDEEP SRRRCGKKGR IEGEEEQEGE GEADDDAADR NCKSSKENKK RRGEKKAREP
101: RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS TYPRSYYRCT TARCGVKKRV ERSQQDPSTV ITTYEGQHTH PSPIDLLRRG GGAAALMRSA AVAGGFRRPD
201: DLLKIDDYAG TPIGFLPLLP PGGIGAGGGG RLLHHRARSS QLAAVDAYGG MLELDFIPSI PR
101: RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS TYPRSYYRCT TARCGVKKRV ERSQQDPSTV ITTYEGQHTH PSPIDLLRRG GGAAALMRSA AVAGGFRRPD
201: DLLKIDDYAG TPIGFLPLLP PGGIGAGGGG RLLHHRARSS QLAAVDAYGG MLELDFIPSI PR
001: MSNETRDLYN YQYPSSFSLH EMMNLPTSNP SSYGNLPSQN GFNPSTYSFT DCLQSSPAAY ESLLQKTFGL SPSSSEVFNS SIDQEPNRDV TNDVINGGAC
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP
Arabidopsis Description
WRKY28WRKY28 [Source:UniProtKB/TrEMBL;Acc:A0A178V3M3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.