CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044162_P001	Maize	nucleus	88.64	90.91
Zm00001d011413_P001	Maize	nucleus	84.21	84.68
TraesCS3D01G226300.1	Wheat	nucleus	67.31	70.43
TraesCS3A01G228600.1	Wheat	nucleus	66.76	69.86
TraesCS3B01G256000.1	Wheat	nucleus	66.48	69.36
Os01t0626400-01	Rice	nucleus	72.02	68.6
OQU78504	Sorghum	nucleus	33.24	45.8
EES03393	Sorghum	nucleus	38.78	34.15
KXG34273	Sorghum	mitochondrion	24.38	32.35
EER90854	Sorghum	nucleus	27.98	30.51
EES08501	Sorghum	nucleus	18.84	30.22
EES18690	Sorghum	nucleus	35.46	30.19
EES18577	Sorghum	plastid	17.45	28.77
EES19157	Sorghum	nucleus	16.07	28.16
KXG31104	Sorghum	nucleus	18.28	27.73
EES01425	Sorghum	nucleus	18.01	26.42
EES00970	Sorghum	nucleus	15.51	25.93
EES19853	Sorghum	nucleus, plastid	17.17	25.73
KXG33244	Sorghum	plastid	15.24	24.44
EES00157	Sorghum	nucleus	16.9	23.46
KXG26824	Sorghum	nucleus	17.45	23.42
OQU86187	Sorghum	mitochondrion, nucleus	18.01	22.03

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:8084860	UniProt:C5XED4	EnsemblPlants:EES01107	ProteinID:EES01107
ProteinID:EES01107.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF52
SMART:SM00774	EnsemblPlantsGene:SORBI_3003G227300	SUPFAM:SSF118290	UniParc:UPI0001A84391	InterPro:WRKY_dom	InterPro:WRKY_dom_sf
RefSeq:XP_002455987.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:56472263..56479136

Molecular Weight (calculated)

38881.0 Da

IEP (calculated)

7.129

GRAVY (calculated)

-0.881

Length

361 amino acids

Sequence
(BLAST)

001: MSSGGGGSSG GGGDHHGVYH QHGHGHLARA DAGAEYVFHS NDMESFFFNQ PAASAGVDGS GSRTTGAADE LMPPYSSITD YLQGFLQDPS GLARHLDAPC
101: LPAEDAPLKH ELSVDVSHDS QGTSGAPGGE GAAMHTPNSS VSLSSSDREG EGGQQPRRCK KGRPKAEDAE GDEKEQEDGE NSSKANKSKK KAEKRQRQPR
201: VAFLTKSEVD HLEDGYRWRK YGQKAVKNSP YPRSYYRCTT PKCGVKKRVE RSYQDPSTVI TTYEGQHTHH SPASLRAGGA HLFMSNAHGG LPPHLMPSSF
301: GRPDLMSMMH PAMGANPSMF LPSMPPPHMS TPSPAPPLQQ HHFTDYALLQ DLFPSTMPNN P

Best Arabidopsis Sequence Match ( AT1G29860.1 )
(BLAST)

001: MDDHVEHNYN TSLEEVHFKS LSDCLQSSLV MDYNSLEKVF KFSPYSSPFQ SVSPSVNNPY LNLTSNSPVV SSSSNEGEPK ENTNDKSDQM EDNEGDLHGV
101: GESSKQLTKQ GKKKGEKKER EVRVAFMTKS EIDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCNVKK RVERSFQDPS IVITTYEGKH NHPIPSTLRG
201: TVAAEHLLVH RGGGGSLLHS FPRHHQDFLM MKHSPANYQS VGSLSYEHGH GTSSYNFNNN QPVVDYGLLQ DIVPSMFSKN ES

Arabidopsis Description

WRKY71Probable WRKY transcription factor 71 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.