CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 4
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008793_P001	Maize	nucleus	73.46	83.41
Zm00001d039531_P001	Maize	nucleus	79.62	75.82
KRH15622	Soybean	nucleus	18.46	70.59
EES19157	Sorghum	nucleus	35.77	45.15
Os01t0186000-01	Rice	cytosol, nucleus	33.08	44.56
GSMUA_Achr7P09680_001	Banana	nucleus	31.54	40.59
KRH61557	Soybean	nucleus	25.0	40.37
KRH05396	Soybean	nucleus	23.85	37.8
VIT_04s0008g01470.t01	Wine grape	nucleus	23.46	36.75
KRH52231	Soybean	nucleus	22.31	36.02
Solyc08g062490.2.1	Tomato	nucleus	25.0	35.91
CDX87064	Canola	nucleus	22.69	34.5
Bra009885.1-P	Field mustard	nucleus	23.08	34.09
CDX88219	Canola	nucleus	23.08	34.09
CDY48151	Canola	nucleus	22.31	33.92
CDY05537	Canola	nucleus	21.54	33.33
EES00970	Sorghum	nucleus	27.69	33.33
KXG33244	Sorghum	plastid	28.85	33.33
CDY52627	Canola	nucleus	22.31	32.95
AT5G26170.1	Thale cress	nucleus	21.92	32.95
Bra020546.1-P	Field mustard	nucleus	21.15	32.74
CDY24990	Canola	nucleus	21.15	32.54
EES18577	Sorghum	plastid	26.92	31.96
Bra036563.1-P	Field mustard	nucleus	18.46	30.38
PGSC0003DMT400021144	Potato	nucleus	13.08	26.56
EES01425	Sorghum	nucleus	21.92	23.17
KXG31104	Sorghum	nucleus	21.15	23.11
EES08501	Sorghum	nucleus	19.23	22.22
EES19853	Sorghum	nucleus, plastid	19.62	21.16
KXG26824	Sorghum	nucleus	21.54	20.82
KXG34273	Sorghum	mitochondrion	20.38	19.49
OQU78504	Sorghum	nucleus	19.62	19.47
OQU86187	Sorghum	mitochondrion, nucleus	21.15	18.64
EER90854	Sorghum	nucleus	21.92	17.22
EES01107	Sorghum	nucleus	23.46	16.9
EES03393	Sorghum	nucleus	23.46	14.88
EES18690	Sorghum	nucleus	24.23	14.86

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:8078744	UniProt:C5XM15	EnsemblPlants:EES00157	ProteinID:EES00157
ProteinID:EES00157.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF43
SMART:SM00774	EnsemblPlantsGene:SORBI_3003G037400	SUPFAM:SSF118290	unigene:Sbi.19080	UniParc:UPI0001A844A5	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	RefSeq:XP_002455037.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:3517021..3519078

Molecular Weight (calculated)

26657.6 Da

IEP (calculated)

6.492

GRAVY (calculated)

-0.358

Length

260 amino acids

Sequence
(BLAST)

001: MAASLGLAHD ASCYAAYPPA AAAASSYFPS PPPPGDLVAE FPPTAAATAM ADDYYYYYFQ FGEEMGGARA PGCGGGYCSP PAPAFDNGMS LLSYGGVDGD
101: GRRPMSGPAA GTGGNGGGGR PPASRIGFRT RSEVDVLDDG FKWRKYGKKA VKSSPNPRNY YRCSSEGCGV KKRVERDSDD PRYVITTYDG VHNHAAPGAA
201: YLCPPPPRGA TATAAAPCFS SPCSGSASAA LVAAPSWSGA FDAWEAQLAA AAAHSSESSY

Best Arabidopsis Sequence Match ( AT5G64810.1 )
(BLAST)

001: MNISQNPSPN FTYFSDENFI NPFMDNNDFS NLMFFDIDEG GNNGLIEEEI SSPTSIVSSE TFTGESGGSG SATTLSKKES TNRGSKESDQ TKETGHRVAF
101: RTRSKIDVMD DGFKWRKYGK KSVKNNINKR NYYKCSSEGC SVKKRVERDG DDAAYVITTY EGVHNHESLS NVYYNEMVLS YDHDNWNQHS LLRS

Arabidopsis Description

WRKY51Probable WRKY transcription factor 51 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.