Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88219 | Canola | nucleus | 94.32 | 94.32 |
| CDX87064 | Canola | nucleus | 86.36 | 88.89 |
| CDY48151 | Canola | nucleus | 82.95 | 85.38 |
| CDY05537 | Canola | nucleus | 77.84 | 81.55 |
| CDY24990 | Canola | nucleus | 77.27 | 80.47 |
| AT5G26170.1 | Thale cress | nucleus | 78.98 | 80.35 |
| KRH15622 | Soybean | nucleus | 27.27 | 70.59 |
| GSMUA_Achr3P20450_001 | Banana | cytosol, nucleus, plastid | 30.11 | 56.38 |
| KRH61557 | Soybean | nucleus | 47.73 | 52.17 |
| KRH52231 | Soybean | nucleus | 46.02 | 50.31 |
| VIT_04s0008g01470.t01 | Wine grape | nucleus | 45.45 | 48.19 |
| KRH05396 | Soybean | nucleus | 44.32 | 47.56 |
| CDY72079 | Canola | nucleus | 27.84 | 44.14 |
| Solyc08g062490.2.1 | Tomato | nucleus | 38.64 | 37.57 |
| GSMUA_Achr7P09680_001 | Banana | nucleus | 39.2 | 34.16 |
| CDY18694 | Canola | nucleus | 33.52 | 34.1 |
| CDX77096 | Canola | nucleus | 27.27 | 33.33 |
| CDX81259 | Canola | nucleus | 37.5 | 33.17 |
| PGSC0003DMT400021144 | Potato | nucleus | 23.86 | 32.81 |
| Os01t0186000-01 | Rice | cytosol, nucleus | 35.23 | 32.12 |
| CDY08849 | Canola | nucleus | 37.5 | 32.04 |
| CDY14512 | Canola | nucleus | 37.5 | 32.04 |
| CDX69672 | Canola | nucleus | 26.7 | 31.97 |
| CDX70492 | Canola | nucleus | 26.7 | 31.97 |
| CDX78504 | Canola | nucleus | 26.7 | 31.97 |
| CDX97223 | Canola | nucleus | 26.7 | 31.97 |
| Zm00001d011133_P001 | Maize | plastid | 35.23 | 31.63 |
| CDY31301 | Canola | nucleus | 35.23 | 31.47 |
| Zm00001d037607_P001 | Maize | nucleus | 34.66 | 31.28 |
| Zm00001d009939_P001 | Maize | nucleus | 35.8 | 30.73 |
| TraesCS1D01G122400.1 | Wheat | nucleus | 33.52 | 30.41 |
| Os05t0183100-01 | Rice | nucleus | 36.36 | 30.19 |
| HORVU1Hr1G027700.1 | Barley | nucleus | 34.09 | 30.15 |
| EES18577 | Sorghum | plastid | 37.5 | 30.14 |
| EES19157 | Sorghum | nucleus | 35.23 | 30.1 |
| TraesCS3B01G277300.1 | Wheat | plastid | 33.52 | 29.5 |
| Zm00001d043663_P001 | Maize | plastid | 35.23 | 29.38 |
| CDX83415 | Canola | nucleus, plastid | 31.25 | 29.26 |
| TraesCS3D01G248500.1 | Wheat | mitochondrion | 33.52 | 28.78 |
| TraesCS1A01G358400.1 | Wheat | plastid | 35.8 | 28.64 |
| TraesCS1A01G121500.1 | Wheat | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 31.82 | 28.57 |
| TraesCS3A01G248700.1 | Wheat | plastid | 32.95 | 28.57 |
| Os05t0537100-00 | Rice | cytosol, plastid | 35.8 | 28.51 |
| Zm00001d038843_P001 | Maize | plastid | 35.8 | 28.51 |
| CDX95615 | Canola | nucleus, plastid | 30.68 | 28.42 |
| TraesCS1B01G374700.1 | Wheat | nucleus, plastid | 35.8 | 28.25 |
| TraesCS1D01G362900.1 | Wheat | nucleus, plastid | 35.23 | 28.18 |
| HORVU0Hr1G001430.1 | Barley | plastid | 34.66 | 27.98 |
| HORVU3Hr1G067510.1 | Barley | mitochondrion, plastid | 33.52 | 27.83 |
| TraesCS1A01G358100.1 | Wheat | nucleus, plastid | 34.66 | 27.73 |
| TraesCS1B01G374900.1 | Wheat | plastid | 34.66 | 27.73 |
| TraesCS1D01G363300.1 | Wheat | plastid | 34.66 | 27.35 |
| KXG33244 | Sorghum | plastid | 34.09 | 26.67 |
| TraesCS3A01G111200.1 | Wheat | nucleus | 33.52 | 26.22 |
| CDY48258 | Canola | nucleus | 31.25 | 25.58 |
| TraesCS3D01G113200.1 | Wheat | nucleus | 32.39 | 25.56 |
| Zm00001d008793_P001 | Maize | nucleus | 32.95 | 25.33 |
| CDY71963 | Canola | nucleus | 30.68 | 25.23 |
| TraesCS3B01G129900.1 | Wheat | nucleus | 31.82 | 25.23 |
| CDY39732 | Canola | nucleus | 25.0 | 25.0 |
| CDY44466 | Canola | nucleus | 25.0 | 25.0 |
| CDY34393 | Canola | nucleus | 26.7 | 24.74 |
| CDY30483 | Canola | nucleus | 30.68 | 24.55 |
| CDY25554 | Canola | nucleus | 26.14 | 24.47 |
| CDY23453 | Canola | nucleus | 30.11 | 24.31 |
| CDY38208 | Canola | nucleus | 25.57 | 24.19 |
| CDY55479 | Canola | nucleus | 25.57 | 24.19 |
| Os01t0714800-01 | Rice | plastid | 33.52 | 24.08 |
| HORVU3Hr1G020140.1 | Barley | mitochondrion | 32.95 | 23.58 |
| EES00157 | Sorghum | nucleus | 32.95 | 22.31 |
| Zm00001d039531_P001 | Maize | nucleus | 34.09 | 21.98 |
| HORVU1Hr1G080300.1 | Barley | nucleus | 34.09 | 21.51 |
| CDY46824 | Canola | nucleus | 35.23 | 21.38 |
| CDX98155 | Canola | nucleus | 32.95 | 20.42 |
| CDY26310 | Canola | nucleus | 31.25 | 20.15 |
| CDY43194 | Canola | nucleus | 31.25 | 19.86 |
| CDX99859 | Canola | nucleus | 30.68 | 19.78 |
| CDX76541 | Canola | nucleus | 31.82 | 19.05 |
| CDY08894 | Canola | nucleus | 31.25 | 18.71 |
| CDY12144 | Canola | nucleus | 31.25 | 18.64 |
| CDX78832 | Canola | nucleus | 32.39 | 18.51 |
| CDY04276 | Canola | nucleus | 30.11 | 18.47 |
| CDX72701 | Canola | nucleus | 29.55 | 18.44 |
| CDY07352 | Canola | nucleus | 30.11 | 18.34 |
| CDX99495 | Canola | nucleus | 32.39 | 18.27 |
| CDY41978 | Canola | nucleus | 30.68 | 18.12 |
| CDY51420 | Canola | nucleus | 32.95 | 17.9 |
| CDY37794 | Canola | nucleus | 31.82 | 17.89 |
| CDY54139 | Canola | nucleus | 30.11 | 17.79 |
| CDY53184 | Canola | nucleus | 29.55 | 17.75 |
| CDX80094 | Canola | nucleus | 31.82 | 17.72 |
| CDY43969 | Canola | nucleus | 31.82 | 17.67 |
| CDX90417 | Canola | nucleus | 31.25 | 17.57 |
| CDY09083 | Canola | nucleus | 31.25 | 17.57 |
| CDY11416 | Canola | nucleus | 29.55 | 17.45 |
| CDY27500 | Canola | nucleus | 32.95 | 17.42 |
| CDX95947 | Canola | nucleus | 28.98 | 17.35 |
| CDY40910 | Canola | nucleus | 28.98 | 17.35 |
| CDY01523 | Canola | nucleus | 30.68 | 17.31 |
| CDX87722 | Canola | nucleus | 30.68 | 17.25 |
| CDY50313 | Canola | nucleus | 30.11 | 17.15 |
| CDX76630 | Canola | nucleus | 28.41 | 16.84 |
| CDY72613 | Canola | nucleus | 30.68 | 16.72 |
| CDX77655 | Canola | nucleus | 30.11 | 16.41 |
| CDY33471 | Canola | nucleus | 30.11 | 16.41 |
| CDY03224 | Canola | nucleus | 29.55 | 16.2 |
| CDY35159 | Canola | nucleus | 29.55 | 16.2 |
| CDX85413 | Canola | nucleus | 31.82 | 14.04 |
| CDY05620 | Canola | nucleus | 30.68 | 13.81 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078IRM8 | UniProt:A0A078IRM8 | EnsemblPlants:CDY52627 | ProteinID:CDY52627 |
| ProteinID:CDY52627.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00007413001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF43 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EBD8D9 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC07g49530DBnaC07g49530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRM8]
Coordinates
chrLK033109:-:32154..33292
Molecular Weight (calculated)
19534.4 Da
IEP (calculated)
6.019
GRAVY (calculated)
-0.840
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDAETNLGR RFSDDTYSGF DLPDLYLSDE WMDDDLVSAV SGMNHSYGYE TSDSAHAAAF FSGSSSGYGH PESPCTNASV AAATPTASAE KQIKKEKKKV
101: KERVAFKTQS EVEVLDDGFK WRKYGKKMVK NSPNPRNYFK CSADGCPVKK RVERDGDDPS FVITTYEGFH NHSSIN
101: KERVAFKTQS EVEVLDDGFK WRKYGKKMVK NSPNPRNYFK CSADGCPVKK RVERDGDDPS FVITTYEGFH NHSSIN
001: MNDADTNLGS SFSDDTHSVF EFPELDLSDE WMDDDLVSAV SGMNQSYGYQ TSDVAGALFS GSSSCFSHPE SPSTKTYVAA TATASADNQN KKEKKKIKGR
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
Arabidopsis Description
WRKY50Probable WRKY transcription factor 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.