Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G01970.1 | CDX73678 | AT3G51920.1 | 17360592 |
| AT3G01970.1 | CDX95314 | AT3G51920.1 | 17360592 |
| AT3G01970.1 | CDY23174 | AT3G51920.1 | 17360592 |
| AT3G01970.1 | CDX92401 | AT5G21274.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040557.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| AT3G01970.1 | Thale cress | nucleus | 81.94 | 80.27 |
| CDX97223 | Canola | nucleus | 52.08 | 51.02 |
| CDX69672 | Canola | nucleus | 52.08 | 51.02 |
| CDX70492 | Canola | nucleus | 51.39 | 50.34 |
| CDX78504 | Canola | nucleus | 51.39 | 50.34 |
| CDY72079 | Canola | nucleus | 36.81 | 47.75 |
| CDY44466 | Canola | nucleus | 40.28 | 32.95 |
| CDY39732 | Canola | nucleus | 39.58 | 32.39 |
| CDY38208 | Canola | nucleus | 41.67 | 32.26 |
| CDY25554 | Canola | nucleus | 41.67 | 31.91 |
| CDY55479 | Canola | nucleus | 40.97 | 31.72 |
| CDY34393 | Canola | nucleus | 41.67 | 31.58 |
| CDY05537 | Canola | nucleus | 34.03 | 29.17 |
| CDY24990 | Canola | nucleus | 34.03 | 28.99 |
| CDX87064 | Canola | nucleus | 34.03 | 28.66 |
| CDX83415 | Canola | nucleus, plastid | 36.81 | 28.19 |
| CDY48151 | Canola | nucleus | 33.33 | 28.07 |
| CDX95615 | Canola | nucleus, plastid | 36.81 | 27.89 |
| CDX88219 | Canola | nucleus | 34.03 | 27.84 |
| CDY52627 | Canola | nucleus | 33.33 | 27.27 |
| CDY30483 | Canola | nucleus | 40.28 | 26.36 |
| CDY71963 | Canola | nucleus | 38.19 | 25.7 |
| CDY23453 | Canola | nucleus | 38.89 | 25.69 |
| CDY48258 | Canola | nucleus | 38.19 | 25.58 |
| CDY18694 | Canola | nucleus | 29.86 | 24.86 |
| CDX81259 | Canola | nucleus | 31.25 | 22.61 |
| CDY08894 | Canola | nucleus | 43.75 | 21.43 |
| CDY14512 | Canola | nucleus | 30.56 | 21.36 |
| CDY08849 | Canola | nucleus | 30.56 | 21.36 |
| CDY31301 | Canola | nucleus | 29.17 | 21.32 |
| CDX76541 | Canola | nucleus | 42.36 | 20.75 |
| CDY43194 | Canola | nucleus | 39.58 | 20.58 |
| CDX80094 | Canola | nucleus | 45.14 | 20.57 |
| CDY37794 | Canola | nucleus | 44.44 | 20.45 |
| CDY04276 | Canola | nucleus | 40.28 | 20.21 |
| CDX98155 | Canola | nucleus | 39.58 | 20.07 |
| CDY07352 | Canola | nucleus | 40.28 | 20.07 |
| CDX99859 | Canola | nucleus | 37.5 | 19.78 |
| CDY26310 | Canola | nucleus | 37.5 | 19.78 |
| CDY40910 | Canola | nucleus | 40.28 | 19.73 |
| CDX95947 | Canola | nucleus | 40.28 | 19.73 |
| CDY54139 | Canola | nucleus | 40.28 | 19.46 |
| CDY72613 | Canola | nucleus | 43.06 | 19.2 |
| CDY01523 | Canola | nucleus | 40.97 | 18.91 |
| CDX78832 | Canola | nucleus | 40.28 | 18.83 |
| CDY51420 | Canola | nucleus | 42.36 | 18.83 |
| CDY11416 | Canola | nucleus | 38.89 | 18.79 |
| CDX99495 | Canola | nucleus | 40.28 | 18.59 |
| CDY09083 | Canola | nucleus | 40.28 | 18.53 |
| CDX90417 | Canola | nucleus | 40.28 | 18.53 |
| CDX72701 | Canola | nucleus | 36.11 | 18.44 |
| CDY27500 | Canola | nucleus | 42.36 | 18.32 |
| CDY12144 | Canola | nucleus | 37.5 | 18.31 |
| CDX76630 | Canola | nucleus | 37.5 | 18.18 |
| CDY50313 | Canola | nucleus | 38.89 | 18.12 |
| CDY43969 | Canola | nucleus | 39.58 | 17.98 |
| CDX77655 | Canola | nucleus | 39.58 | 17.65 |
| CDY41978 | Canola | nucleus | 36.11 | 17.45 |
| CDY03224 | Canola | nucleus | 38.89 | 17.45 |
| CDY35159 | Canola | nucleus | 38.89 | 17.45 |
| CDY53184 | Canola | nucleus | 35.42 | 17.41 |
| CDY33471 | Canola | nucleus | 38.89 | 17.34 |
| CDX87722 | Canola | nucleus | 37.5 | 17.25 |
| CDY05620 | Canola | nucleus | 45.14 | 16.62 |
| CDX85413 | Canola | nucleus | 45.14 | 16.29 |
| CDY46824 | Canola | nucleus | 29.86 | 14.83 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EnsemblPlants:CDX77096 | ProteinID:CDX77096 | ProteinID:CDX77096.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006810 | GO:GO:0006817 | GO:GO:0008134 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0044212 | EnsemblPlantsGene:GSBRNA2T00127685001 | InterPro:IPR003657 | InterPro:IPR036576 |
| PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF25 | SMART:SM00774 | SUPFAM:SSF118290 |
| UniParc:UPI0001E247E3 | GO:V9LYL2 | UniProt:V9LYL2 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg |
Description
BnaC04g38910DProbable WRKY transcription factor 45 [Source:Projected from Arabidopsis thaliana (AT3G01970) UniProtKB/Swiss-Prot;Acc:Q9S763]
Coordinates
chrLK031809:-:1075463..1076352
Molecular Weight (calculated)
16767.6 Da
IEP (calculated)
9.859
GRAVY (calculated)
-1.082
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDRSCQVLF PSSSVDHRLS GDQTQINTSS SLQQHNTNKE EKHKSKKKER EARFAFQTRS QVDILDDGYR WRKYGQKAVK NNPFPRSYYK CTEKGCRVKK
101: QVQRLSGDEG VVVTTYQGVH THPVDTPSDN FHHILTQMHI FPPF
101: QVQRLSGDEG VVVTTYQGVH THPVDTPSDN FHHILTQMHI FPPF
001: MEDRRCDVLF PCSSSVDPRL TEFHGVDNSA QPTTSSEEKP RSKKKKKERE ARYAFQTRSQ VDILDDGYRW RKYGQKAVKN NPFPRSYYKC TEEGCRVKKQ
101: VQRQWGDEGV VVTTYQGVHT HAVDKPSDNF HHILTQMHIF PPFCLKE
101: VQRQWGDEGV VVTTYQGVHT HAVDKPSDNF HHILTQMHIF PPFCLKE
Arabidopsis Description
WRKY45Probable WRKY transcription factor 45 [Source:UniProtKB/Swiss-Prot;Acc:Q9S763]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.