Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021393.1-P | Field mustard | nucleus | 99.69 | 100.0 |
| CDY27500 | Canola | nucleus | 96.6 | 93.99 |
| CDY37794 | Canola | nucleus | 79.94 | 82.75 |
| CDX80094 | Canola | nucleus | 79.01 | 81.01 |
| CDY72079 | Canola | nucleus | 16.98 | 49.55 |
| VIT_07s0005g01710.t01 | Wine grape | nucleus | 40.12 | 43.05 |
| CDX77096 | Canola | nucleus | 18.83 | 42.36 |
| KRH69197 | Soybean | nucleus | 41.67 | 42.19 |
| KRH31775 | Soybean | nucleus | 41.98 | 42.11 |
| CDX70492 | Canola | nucleus | 17.9 | 39.46 |
| CDX78504 | Canola | nucleus | 17.9 | 39.46 |
| CDX69672 | Canola | nucleus | 17.28 | 38.1 |
| CDX97223 | Canola | nucleus | 17.28 | 38.1 |
| CDX87064 | Canola | nucleus | 18.83 | 35.67 |
| CDY48151 | Canola | nucleus | 18.83 | 35.67 |
| CDY11416 | Canola | nucleus | 31.48 | 34.23 |
| CDX76630 | Canola | nucleus | 31.17 | 34.01 |
| CDX88219 | Canola | nucleus | 17.9 | 32.95 |
| CDY52627 | Canola | nucleus | 17.9 | 32.95 |
| CDY05537 | Canola | nucleus | 16.98 | 32.74 |
| CDX95947 | Canola | nucleus | 29.63 | 32.65 |
| CDX76541 | Canola | nucleus | 29.63 | 32.65 |
| CDY24990 | Canola | nucleus | 16.98 | 32.54 |
| PGSC0003DMT400023368 | Potato | nucleus | 31.79 | 32.49 |
| CDY43194 | Canola | nucleus | 27.78 | 32.49 |
| CDX98155 | Canola | nucleus | 28.4 | 32.39 |
| CDY40910 | Canola | nucleus | 29.32 | 32.31 |
| CDY08894 | Canola | nucleus | 29.01 | 31.97 |
| CDX83415 | Canola | nucleus, plastid | 18.52 | 31.91 |
| CDY26310 | Canola | nucleus | 26.85 | 31.87 |
| CDY44466 | Canola | nucleus | 17.28 | 31.82 |
| CDX95615 | Canola | nucleus, plastid | 18.52 | 31.58 |
| Solyc01g079260.2.1 | Tomato | nucleus | 31.17 | 31.56 |
| CDX99859 | Canola | nucleus | 26.54 | 31.5 |
| CDY04276 | Canola | nucleus | 27.78 | 31.36 |
| CDY39732 | Canola | nucleus | 16.98 | 31.25 |
| CDX78832 | Canola | nucleus | 29.63 | 31.17 |
| CDY07352 | Canola | nucleus | 27.78 | 31.14 |
| CDX99495 | Canola | nucleus | 29.94 | 31.09 |
| CDY01523 | Canola | nucleus | 29.63 | 30.77 |
| CDY09083 | Canola | nucleus | 29.63 | 30.67 |
| CDX90417 | Canola | nucleus | 29.63 | 30.67 |
| CDY54139 | Canola | nucleus | 28.09 | 30.54 |
| CDY38208 | Canola | nucleus | 16.98 | 29.57 |
| CDY34393 | Canola | nucleus | 17.28 | 29.47 |
| CDY35159 | Canola | nucleus | 29.01 | 29.28 |
| CDY03224 | Canola | nucleus | 29.01 | 29.28 |
| CDY25554 | Canola | nucleus | 16.98 | 29.26 |
| CDY33471 | Canola | nucleus | 29.01 | 29.1 |
| CDY55479 | Canola | nucleus | 16.67 | 29.03 |
| CDY43969 | Canola | nucleus | 28.4 | 29.02 |
| CDX77655 | Canola | nucleus | 28.7 | 28.79 |
| CDY71963 | Canola | nucleus | 18.83 | 28.5 |
| CDY50313 | Canola | nucleus | 27.16 | 28.48 |
| CDY48258 | Canola | nucleus | 18.83 | 28.37 |
| CDY30483 | Canola | nucleus | 19.14 | 28.18 |
| CDY23453 | Canola | nucleus | 18.83 | 27.98 |
| CDY72613 | Canola | nucleus | 27.78 | 27.86 |
| CDY18694 | Canola | nucleus | 14.2 | 26.59 |
| CDX87722 | Canola | nucleus | 25.62 | 26.52 |
| CDY05620 | Canola | nucleus | 31.79 | 26.34 |
| CDX81259 | Canola | nucleus | 15.43 | 25.13 |
| CDX85413 | Canola | nucleus | 30.56 | 24.81 |
| CDY14512 | Canola | nucleus | 15.74 | 24.76 |
| CDY08849 | Canola | nucleus | 15.74 | 24.76 |
| CDY31301 | Canola | nucleus | 14.2 | 23.35 |
| CDY12144 | Canola | nucleus | 20.06 | 22.03 |
| CDY53184 | Canola | nucleus | 19.75 | 21.84 |
| CDY41978 | Canola | nucleus | 19.44 | 21.14 |
| CDX72701 | Canola | nucleus | 18.21 | 20.92 |
| CDY46824 | Canola | nucleus | 14.51 | 16.21 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078IK46 | UniProt:A0A078IK46 | EnsemblPlants:CDY51420 | ProteinID:CDY51420 |
| ProteinID:CDY51420.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00003355001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PIRSF:PIRSF038130 |
| PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF80 | SMART:SM00774 | SUPFAM:SSF118290 | InterPro:TF_WRKY_IIc |
| UniParc:UPI0004EE4899 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
BnaA04g26970DBnaA04g26970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IK46]
Coordinates
chrLK032993:-:31258..32494
Molecular Weight (calculated)
36242.0 Da
IEP (calculated)
6.906
GRAVY (calculated)
-0.732
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFTSFYHPS SLSVWEFGDL MAAERDSFEL LGSQDIAAAS PHSFLLETFQ PQTQPFVKLP SADSTIFQAP PSNATTDKSV TSRVESFCSD HFLINSPATP
101: NSSSFSSASS EAVNEEKAKR ENQEEEEQNK SDTNKQVKPK NNSLKRQREP RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT TASCNVKKRV
201: ERSFRDPSTV VTTYEGQHTH NISPLMSRPV PGGGFFGSSG VASNLGGNFG FPMESSTLIS PQFQQLVHYH QQQEVLSCFG GVGQYVNSHT HGYGDDERVK
301: KSRGLVRDNG LLQDVVPCHM LKEE
101: NSSSFSSASS EAVNEEKAKR ENQEEEEQNK SDTNKQVKPK NNSLKRQREP RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT TASCNVKKRV
201: ERSFRDPSTV VTTYEGQHTH NISPLMSRPV PGGGFFGSSG VASNLGGNFG FPMESSTLIS PQFQQLVHYH QQQEVLSCFG GVGQYVNSHT HGYGDDERVK
301: KSRGLVRDNG LLQDVVPCHM LKEE
001: MEFTDFSKTS FYYPSSQSVW DFGDLAAAER HSLGFMELLS SQQHQDFATV SPHSFLLQTS QPQTQTQPSA KLSSSIIQAP PSEQLVTSKV ESLCSDHLLI
101: NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
201: TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
301: SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE
101: NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
201: TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
301: SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE
Arabidopsis Description
WRKY23Probable WRKY transcription factor 23 [Source:UniProtKB/Swiss-Prot;Acc:O22900]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.