Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51420 | Canola | nucleus | 93.99 | 96.6 |
| Bra021393.1-P | Field mustard | nucleus | 93.69 | 96.59 |
| CDY37794 | Canola | nucleus | 77.18 | 82.11 |
| CDX80094 | Canola | nucleus | 76.28 | 80.38 |
| CDY72079 | Canola | nucleus | 16.52 | 49.55 |
| VIT_07s0005g01710.t01 | Wine grape | nucleus | 39.04 | 43.05 |
| CDX77096 | Canola | nucleus | 18.32 | 42.36 |
| KRH69197 | Soybean | nucleus | 40.54 | 42.19 |
| KRH31775 | Soybean | nucleus | 40.84 | 42.11 |
| CDX70492 | Canola | nucleus | 17.42 | 39.46 |
| CDX78504 | Canola | nucleus | 17.42 | 39.46 |
| CDX69672 | Canola | nucleus | 16.82 | 38.1 |
| CDX97223 | Canola | nucleus | 16.82 | 38.1 |
| CDX87064 | Canola | nucleus | 18.32 | 35.67 |
| CDY48151 | Canola | nucleus | 18.32 | 35.67 |
| CDY11416 | Canola | nucleus | 30.03 | 33.56 |
| CDX76630 | Canola | nucleus | 29.73 | 33.33 |
| PGSC0003DMT400023368 | Potato | nucleus | 31.53 | 33.12 |
| CDX88219 | Canola | nucleus | 17.42 | 32.95 |
| CDY52627 | Canola | nucleus | 17.42 | 32.95 |
| CDY05537 | Canola | nucleus | 16.52 | 32.74 |
| CDX95947 | Canola | nucleus | 28.83 | 32.65 |
| CDY24990 | Canola | nucleus | 16.52 | 32.54 |
| CDY40910 | Canola | nucleus | 28.53 | 32.31 |
| CDX76541 | Canola | nucleus | 28.53 | 32.31 |
| Solyc01g079260.2.1 | Tomato | nucleus | 30.93 | 32.19 |
| CDY43194 | Canola | nucleus | 26.73 | 32.13 |
| CDX98155 | Canola | nucleus | 27.33 | 32.04 |
| CDX83415 | Canola | nucleus, plastid | 18.02 | 31.91 |
| CDY44466 | Canola | nucleus | 16.82 | 31.82 |
| CDY08894 | Canola | nucleus | 27.93 | 31.63 |
| CDX95615 | Canola | nucleus, plastid | 18.02 | 31.58 |
| CDY26310 | Canola | nucleus | 25.83 | 31.5 |
| CDY04276 | Canola | nucleus | 27.03 | 31.36 |
| CDY39732 | Canola | nucleus | 16.52 | 31.25 |
| CDX78832 | Canola | nucleus | 28.83 | 31.17 |
| CDY07352 | Canola | nucleus | 27.03 | 31.14 |
| CDX99495 | Canola | nucleus | 29.13 | 31.09 |
| CDY01523 | Canola | nucleus | 28.83 | 30.77 |
| CDX99859 | Canola | nucleus | 25.23 | 30.77 |
| CDY09083 | Canola | nucleus | 28.83 | 30.67 |
| CDX90417 | Canola | nucleus | 28.83 | 30.67 |
| CDY54139 | Canola | nucleus | 27.33 | 30.54 |
| CDY38208 | Canola | nucleus | 16.52 | 29.57 |
| CDY34393 | Canola | nucleus | 16.82 | 29.47 |
| CDY33471 | Canola | nucleus | 28.53 | 29.41 |
| CDY25554 | Canola | nucleus | 16.52 | 29.26 |
| CDY55479 | Canola | nucleus | 16.22 | 29.03 |
| CDY43969 | Canola | nucleus | 27.63 | 29.02 |
| CDY35159 | Canola | nucleus | 27.93 | 28.97 |
| CDY03224 | Canola | nucleus | 27.93 | 28.97 |
| CDX77655 | Canola | nucleus | 27.93 | 28.79 |
| CDY71963 | Canola | nucleus | 18.32 | 28.5 |
| CDY72613 | Canola | nucleus | 27.63 | 28.48 |
| CDY50313 | Canola | nucleus | 26.43 | 28.48 |
| CDY48258 | Canola | nucleus | 18.32 | 28.37 |
| CDY30483 | Canola | nucleus | 18.62 | 28.18 |
| CDY23453 | Canola | nucleus | 18.32 | 27.98 |
| CDX87722 | Canola | nucleus | 25.23 | 26.84 |
| CDY05620 | Canola | nucleus | 31.23 | 26.6 |
| CDY18694 | Canola | nucleus | 13.81 | 26.59 |
| CDX85413 | Canola | nucleus | 30.33 | 25.31 |
| CDX81259 | Canola | nucleus | 15.02 | 25.13 |
| CDY14512 | Canola | nucleus | 15.32 | 24.76 |
| CDY08849 | Canola | nucleus | 15.32 | 24.76 |
| CDY31301 | Canola | nucleus | 13.81 | 23.35 |
| CDY12144 | Canola | nucleus | 19.22 | 21.69 |
| CDY53184 | Canola | nucleus | 18.92 | 21.5 |
| CDY41978 | Canola | nucleus | 18.62 | 20.81 |
| CDX72701 | Canola | nucleus | 17.42 | 20.57 |
| CDY46824 | Canola | nucleus | 14.11 | 16.21 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078GLM7 | UniProt:A0A078GLM7 | EnsemblPlants:CDY27500 | ProteinID:CDY27500 |
| ProteinID:CDY27500.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00038171001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PIRSF:PIRSF038130 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF80 | SMART:SM00774 | SUPFAM:SSF118290 | InterPro:TF_WRKY_IIc | UniParc:UPI0004EED566 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
BnaC04g51410DBnaC04g51410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GLM7]
Coordinates
chrLK032205:+:335898..337178
Molecular Weight (calculated)
37348.3 Da
IEP (calculated)
7.404
GRAVY (calculated)
-0.789
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFTSFYHPS SLSVWEFGDL MAAERDSFEL LGSQQHHQLQ DIAAASPHSF LLETLQPQTQ PFVKLPSADS TIFQAPPSNG NATADKSVTS RVESFCSDHF
101: LINSPATPNS SSFSSASSED ANEEKAKRED QEEEEGHKKS DTNKQVKPKN NSLKRQREPR VAFMTKSEVD HLEDGYRWRK YGQKAVKNSP FPRSYYRCTT
201: ASCNVKKRVE RSFRDPSTVV TTYEGQHTHN ISPLMSRPVP GGGFFGSSGV ASNLGGNFGF PMESSTLIAP RFQQLVRYHQ QQEVLSCFGG VGQYVNSHTH
301: GYGDDERVKK SRRLVRDNGL LQDVVPCHML KEE
101: LINSPATPNS SSFSSASSED ANEEKAKRED QEEEEGHKKS DTNKQVKPKN NSLKRQREPR VAFMTKSEVD HLEDGYRWRK YGQKAVKNSP FPRSYYRCTT
201: ASCNVKKRVE RSFRDPSTVV TTYEGQHTHN ISPLMSRPVP GGGFFGSSGV ASNLGGNFGF PMESSTLIAP RFQQLVRYHQ QQEVLSCFGG VGQYVNSHTH
301: GYGDDERVKK SRRLVRDNGL LQDVVPCHML KEE
001: MEFTDFSKTS FYYPSSQSVW DFGDLAAAER HSLGFMELLS SQQHQDFATV SPHSFLLQTS QPQTQTQPSA KLSSSIIQAP PSEQLVTSKV ESLCSDHLLI
101: NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
201: TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
301: SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE
101: NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
201: TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
301: SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE
Arabidopsis Description
WRKY23Probable WRKY transcription factor 23 [Source:UniProtKB/Swiss-Prot;Acc:O22900]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.