Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004466.1-P | Field mustard | nucleus | 99.37 | 98.43 |
| CDY37794 | Canola | nucleus | 97.47 | 98.4 |
| CDY51420 | Canola | nucleus | 81.01 | 79.01 |
| CDY27500 | Canola | nucleus | 80.38 | 76.28 |
| AT2G47260.1 | Thale cress | nucleus | 80.38 | 75.37 |
| CDY72079 | Canola | nucleus | 18.04 | 51.35 |
| CDX77096 | Canola | nucleus | 20.57 | 45.14 |
| VIT_07s0005g01710.t01 | Wine grape | nucleus | 42.72 | 44.7 |
| KRH31775 | Soybean | nucleus | 44.94 | 43.96 |
| KRH69197 | Soybean | nucleus | 44.3 | 43.75 |
| CDX78504 | Canola | nucleus | 18.67 | 40.14 |
| CDX70492 | Canola | nucleus | 18.67 | 40.14 |
| CDX69672 | Canola | nucleus | 18.04 | 38.78 |
| CDX97223 | Canola | nucleus | 18.04 | 38.78 |
| PGSC0003DMT400023368 | Potato | nucleus | 36.39 | 36.28 |
| CDX87064 | Canola | nucleus | 19.3 | 35.67 |
| CDY48151 | Canola | nucleus | 19.3 | 35.67 |
| Solyc01g079260.2.1 | Tomato | nucleus | 36.08 | 35.62 |
| CDY11416 | Canola | nucleus | 32.91 | 34.9 |
| CDX76630 | Canola | nucleus | 32.59 | 34.68 |
| CDX83415 | Canola | nucleus, plastid | 19.94 | 33.51 |
| CDX76541 | Canola | nucleus | 31.01 | 33.33 |
| CDY43194 | Canola | nucleus | 29.11 | 33.21 |
| CDX95615 | Canola | nucleus, plastid | 19.94 | 33.16 |
| CDY24990 | Canola | nucleus | 17.72 | 33.14 |
| CDY08894 | Canola | nucleus | 30.7 | 32.99 |
| CDX88219 | Canola | nucleus | 18.35 | 32.95 |
| CDX98155 | Canola | nucleus | 29.43 | 32.75 |
| CDX95947 | Canola | nucleus | 30.06 | 32.31 |
| CDY26310 | Canola | nucleus | 27.85 | 32.23 |
| CDY05537 | Canola | nucleus | 17.09 | 32.14 |
| CDY40910 | Canola | nucleus | 29.75 | 31.97 |
| CDY52627 | Canola | nucleus | 17.72 | 31.82 |
| CDY01523 | Canola | nucleus | 31.33 | 31.73 |
| CDY09083 | Canola | nucleus | 31.33 | 31.63 |
| CDX90417 | Canola | nucleus | 31.33 | 31.63 |
| CDX99859 | Canola | nucleus | 27.22 | 31.5 |
| CDX78832 | Canola | nucleus | 30.7 | 31.49 |
| CDX99495 | Canola | nucleus | 31.01 | 31.41 |
| CDY04276 | Canola | nucleus | 28.48 | 31.36 |
| CDY44466 | Canola | nucleus | 17.41 | 31.25 |
| CDY39732 | Canola | nucleus | 17.41 | 31.25 |
| CDY07352 | Canola | nucleus | 28.48 | 31.14 |
| CDY38208 | Canola | nucleus | 17.72 | 30.11 |
| CDY34393 | Canola | nucleus | 18.04 | 30.0 |
| CDY71963 | Canola | nucleus | 20.25 | 29.91 |
| CDY54139 | Canola | nucleus | 28.16 | 29.87 |
| CDY25554 | Canola | nucleus | 17.72 | 29.79 |
| CDY48258 | Canola | nucleus | 20.25 | 29.77 |
| CDY55479 | Canola | nucleus | 17.41 | 29.57 |
| CDY30483 | Canola | nucleus | 20.57 | 29.55 |
| CDY72613 | Canola | nucleus | 30.06 | 29.41 |
| CDY23453 | Canola | nucleus | 20.25 | 29.36 |
| CDY33471 | Canola | nucleus | 29.75 | 29.1 |
| CDY43969 | Canola | nucleus | 29.11 | 29.02 |
| CDY35159 | Canola | nucleus | 29.43 | 28.97 |
| CDY03224 | Canola | nucleus | 29.43 | 28.97 |
| CDX77655 | Canola | nucleus | 29.43 | 28.79 |
| CDY50313 | Canola | nucleus | 27.22 | 27.83 |
| CDY05620 | Canola | nucleus | 33.54 | 27.11 |
| CDX87722 | Canola | nucleus | 26.27 | 26.52 |
| CDX85413 | Canola | nucleus | 33.23 | 26.32 |
| CDY18694 | Canola | nucleus | 14.24 | 26.01 |
| CDY14512 | Canola | nucleus | 16.14 | 24.76 |
| CDY08849 | Canola | nucleus | 16.14 | 24.76 |
| CDX81259 | Canola | nucleus | 15.51 | 24.62 |
| CDY12144 | Canola | nucleus | 22.78 | 24.41 |
| CDY53184 | Canola | nucleus | 21.84 | 23.55 |
| CDY41978 | Canola | nucleus | 22.15 | 23.49 |
| CDY31301 | Canola | nucleus | 14.24 | 22.84 |
| CDX72701 | Canola | nucleus | 20.25 | 22.7 |
| CDY46824 | Canola | nucleus | 14.56 | 15.86 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078CVR3 | EnsemblPlants:CDX80094 | ProteinID:CDX80094 | ProteinID:CDX80094.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00132991001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PIRSF:PIRSF038130 |
| PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF80 | SMART:SM00774 | SUPFAM:SSF118290 | InterPro:TF_WRKY_IIc |
| UniParc:UPI0004EDEFCD | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
BnaA05g00620D
Coordinates
chrLK031819:-:1853885..1855565
Molecular Weight (calculated)
35631.3 Da
IEP (calculated)
6.679
GRAVY (calculated)
-0.849
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFTSFHQPS LQSIWDFGEE ERDSLGFMEL LGSQHHSLLL ETLQPQAQPF EKLSSSDLTI LQAPPSNATA DKYVTSKVES LCSDINPPAT PNSSSISSAS
101: SEAVDEDKAK REENEEHEQK KSDTNKQLKP KKNSQKRQRE ARIAFMTKSE VDHLEDGYRW RKYGQKAVKN SPFPRSYYRC TTASCNVKKR VERSFRDPST
201: VVTTYEGQHT HISPLTSRPI SSGGFFFGSS GVASNLGNFG FPMESSTLIY PQFQQLVHYN QQQQQELFPC FGGVGEYVTR HADAYGDDER VKKSRGLGKD
301: NGLLQDVVPS HMLKEE
101: SEAVDEDKAK REENEEHEQK KSDTNKQLKP KKNSQKRQRE ARIAFMTKSE VDHLEDGYRW RKYGQKAVKN SPFPRSYYRC TTASCNVKKR VERSFRDPST
201: VVTTYEGQHT HISPLTSRPI SSGGFFFGSS GVASNLGNFG FPMESSTLIY PQFQQLVHYN QQQQQELFPC FGGVGEYVTR HADAYGDDER VKKSRGLGKD
301: NGLLQDVVPS HMLKEE
001: MEFTDFSKTS FYYPSSQSVW DFGDLAAAER HSLGFMELLS SQQHQDFATV SPHSFLLQTS QPQTQTQPSA KLSSSIIQAP PSEQLVTSKV ESLCSDHLLI
101: NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
201: TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
301: SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE
101: NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
201: TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
301: SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE
Arabidopsis Description
WRKY23Probable WRKY transcription factor 23 [Source:UniProtKB/Swiss-Prot;Acc:O22900]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.