Factsheet for VIT_04s0069g00980.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400083306	Potato	nucleus	45.54	45.1
PGSC0003DMT400080128	Potato	extracellular	54.46	39.86
VIT_04s0069g00970.t01	Wine grape	nucleus	59.41	38.46
Solyc04g051690.2.1	Tomato	nucleus	56.44	32.76
VIT_04s0008g01470.t01	Wine grape	nucleus	53.47	32.53
VIT_07s0031g01710.t01	Wine grape	nucleus	57.43	32.22
GSMUA_Achr8P26240_001	Banana	nucleus	54.46	31.98
GSMUA_Achr4P08880_001	Banana	nucleus	51.49	31.52
GSMUA_Achr7P23980_001	Banana	mitochondrion	49.51	29.59
VIT_17s0000g01280.t01	Wine grape	nucleus	40.59	27.15
Solyc12g056750.1.1	Tomato	nucleus	47.52	25.53
VIT_14s0068g01770.t01	Wine grape	nucleus	44.55	24.73
PGSC0003DMT400059673	Potato	nucleus	47.52	22.54
VIT_01s0010g03930.t01	Wine grape	nucleus, plastid	41.58	22.22
VIT_15s0046g02150.t01	Wine grape	nucleus, plastid	43.56	21.89
PGSC0003DMT400079980	Potato	nucleus	48.51	21.21
Solyc04g072070.2.1	Tomato	nucleus	45.54	20.18
VIT_07s0031g01840.t01	Wine grape	nucleus	41.58	18.58
VIT_01s0011g00720.t01	Wine grape	nucleus	46.53	15.41
VIT_12s0028g00270.t01	Wine grape	nucleus	46.53	15.11
VIT_07s0005g01710.t01	Wine grape	nucleus	44.55	14.9
VIT_10s0003g02810.t01	Wine grape	nucleus	46.53	14.73
VIT_05s0077g00730.t01	Wine grape	nucleus	44.55	14.56

Protein Annotations

EntrezGene:100852944	wikigene:100852944	MapMan:15.5.22	Gene3D:2.20.25.80	ProteinID:CBI24020	ProteinID:CBI24020.3
UniProt:D7T0E8	EMBL:FN595500	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	EntrezGene:LOC100852944	wikigene:LOC100852944	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF48	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI00015CA566
ArrayExpress:VIT_04s0069g00980	EnsemblPlantsGene:VIT_04s0069g00980	EnsemblPlants:VIT_04s0069g00980.t01	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	RefSeq:XP_003631843
RefSeq:XP_003631843.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4:-:9409805..9411286

Molecular Weight (calculated)

12098.3 Da

IEP (calculated)

10.193

GRAVY (calculated)

-1.067

Length

101 amino acids

Sequence
(BLAST)

001: MGIRVFALRT RSEEDIMDDG FKWRKYGKKK IKSNPIYPRN YYRCSSRGCQ VKKRVERDRD DSSYVITTYE GVHNHPTPRN HITLPINYWA LQQTSSHPPF
101: Y

Best Arabidopsis Sequence Match ( AT5G64810.1 )
(BLAST)

001: MNISQNPSPN FTYFSDENFI NPFMDNNDFS NLMFFDIDEG GNNGLIEEEI SSPTSIVSSE TFTGESGGSG SATTLSKKES TNRGSKESDQ TKETGHRVAF
101: RTRSKIDVMD DGFKWRKYGK KSVKNNINKR NYYKCSSEGC SVKKRVERDG DDAAYVITTY EGVHNHESLS NVYYNEMVLS YDHDNWNQHS LLRS

Arabidopsis Description

WRKY51Probable WRKY transcription factor 51 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.