Factsheet for VIT_04s0069g00970.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0069g00980.t01	Wine grape	nucleus	38.46	59.41
PGSC0003DMT400083306	Potato	nucleus	31.41	48.04
PGSC0003DMT400080128	Potato	extracellular	41.67	47.1
VIT_07s0031g01710.t01	Wine grape	nucleus	50.0	43.33
VIT_04s0008g01470.t01	Wine grape	nucleus	41.03	38.55
Solyc04g051690.2.1	Tomato	nucleus	41.03	36.78
GSMUA_Achr4P08880_001	Banana	nucleus	36.54	34.55
GSMUA_Achr8P26240_001	Banana	nucleus	37.82	34.3
GSMUA_Achr7P23980_001	Banana	mitochondrion	36.54	33.73
VIT_17s0000g01280.t01	Wine grape	nucleus	26.28	27.15
Solyc12g056750.1.1	Tomato	nucleus	31.41	26.06
PGSC0003DMT400059673	Potato	nucleus	34.62	25.35
VIT_14s0068g01770.t01	Wine grape	nucleus	28.85	24.73
VIT_15s0046g02150.t01	Wine grape	nucleus, plastid	31.41	24.38
Solyc04g072070.2.1	Tomato	nucleus	33.97	23.25
PGSC0003DMT400079980	Potato	nucleus	33.97	22.94
VIT_07s0031g01840.t01	Wine grape	nucleus	30.77	21.24
VIT_01s0010g03930.t01	Wine grape	nucleus, plastid	25.64	21.16
VIT_01s0011g00720.t01	Wine grape	nucleus	33.97	17.38
VIT_12s0028g00270.t01	Wine grape	nucleus	33.97	17.04
VIT_10s0003g02810.t01	Wine grape	nucleus	33.97	16.61
VIT_07s0005g01710.t01	Wine grape	nucleus	31.41	16.23
VIT_05s0077g00730.t01	Wine grape	nucleus	31.41	15.86

Protein Annotations

EntrezGene:100244369	wikigene:100244369	MapMan:15.5.22	Gene3D:2.20.25.80	ProteinID:CBI24019	ProteinID:CBI24019.3
UniProt:D7T0E7	EMBL:FN595500	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	EntrezGene:LOC100244369	wikigene:LOC100244369	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF48	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0001BE253A
ArrayExpress:VIT_04s0069g00970	EnsemblPlantsGene:VIT_04s0069g00970	EnsemblPlants:VIT_04s0069g00970.t01	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	RefSeq:XP_002263836
RefSeq:XP_002263836.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4:-:9399822..9400803

Molecular Weight (calculated)

17468.2 Da

IEP (calculated)

6.347

GRAVY (calculated)

-0.750

Length

156 amino acids

Sequence
(BLAST)

001: MLEDGSEEDS CSQTTAAASA VTVTGTGHID QLIHTATPTH DGVRRSKESD DGARVVAFRT KSELDVMDDG FKWRKYGKKM VKSSPNPRNY YRCSSGDCQV
101: KKRIERDIED SSYVITTYTG IHNHPIPGVG YYNQMPLMVP YDYDWTLQAS SQSPFS

Best Arabidopsis Sequence Match ( AT5G64810.1 )
(BLAST)

001: MNISQNPSPN FTYFSDENFI NPFMDNNDFS NLMFFDIDEG GNNGLIEEEI SSPTSIVSSE TFTGESGGSG SATTLSKKES TNRGSKESDQ TKETGHRVAF
101: RTRSKIDVMD DGFKWRKYGK KSVKNNINKR NYYKCSSEGC SVKKRVERDG DDAAYVITTY EGVHNHESLS NVYYNEMVLS YDHDNWNQHS LLRS

Arabidopsis Description

WRKY51Probable WRKY transcription factor 51 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.