CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG37587
KXG37588

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G08139.1	KXG37587	AT4G14640.1	17360592
AT5G08139.1	KXG37588	AT4G14640.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031273_P001	Maize	cytosol, plastid	88.05	89.27
Os08t0487500-01	Rice	plastid	62.12	67.16
TraesCS7A01G247700.1	Wheat	cytosol, plastid	58.02	63.2
TraesCS7D01G246300.1	Wheat	plastid	57.68	62.83
TraesCS7B01G144100.1	Wheat	plastid	57.34	62.45
OQU85475	Sorghum	cytosol	25.94	23.75
EER90075	Sorghum	nucleus	21.84	21.12
EER95109	Sorghum	plastid	19.45	20.73
EER89027	Sorghum	nucleus	22.18	20.25
KRH56750	Soybean	cytosol	22.87	19.59
EER92269	Sorghum	nucleus	18.09	18.6
CDY69134	Canola	cytosol	17.75	17.87
KXG39475	Sorghum	cytosol	19.45	17.76
CDX78323	Canola	cytosol	17.41	17.71
Bra005970.1-P	Field mustard	cytosol	17.41	17.59
KRH03189	Soybean	nucleus	21.16	17.46
Solyc02g089410.2.1	Tomato	nucleus	19.11	17.13
OQU84547	Sorghum	cytoskeleton, cytosol, nucleus	22.18	16.8
AT5G08139.1	Thale cress	cytosol	21.5	16.76
EES00577	Sorghum	nucleus	20.14	16.43
KRH18313	Soybean	nucleus	20.82	16.31
EER89401	Sorghum	mitochondrion, nucleus	18.43	16.17
GSMUA_Achr8P24510_001	Banana	cytosol	21.84	16.16
CDX69973	Canola	cytosol	19.45	15.83
KRG93748	Soybean	nucleus, plastid	20.48	15.79
CDY21513	Canola	cytosol	19.11	15.73
PGSC0003DMT400003515	Potato	nucleus	19.8	15.63
CDY02194	Canola	peroxisome	21.16	15.58
EES17560	Sorghum	plastid	21.84	15.5
CDY34722	Canola	cytosol	20.48	15.38
CDY34721	Canola	cytosol	20.14	15.13
Bra009323.1-P	Field mustard	cytosol	19.45	15.04
VIT_17s0000g04730.t01	Wine grape	nucleus	22.53	15.03
AT3G02340.2	Thale cress	cytosol	20.82	14.91
VIT_14s0083g00710.t01	Wine grape	nucleus	19.8	14.83
CDY51628	Canola	peroxisome	20.48	14.78
Bra021467.1-P	Field mustard	nucleus	19.45	14.62
AT5G60820.1	Thale cress	cytosol	20.82	14.56
Bra013006.1-P	Field mustard	nucleus	20.48	14.39
Bra008671.1-P	Field mustard	nucleus	13.99	14.29
KXG33564	Sorghum	mitochondrion	14.68	14.24
CDX69496	Canola	cytosol	13.99	14.24
KXG37275	Sorghum	nucleus	18.43	14.1
AT5G15820.1	Thale cress	cytosol	16.72	14.08
CDX90972	Canola	cytosol	15.7	13.73
Solyc02g065650.1.1	Tomato	cytosol, nucleus, plastid	18.43	13.6
PGSC0003DMT400068309	Potato	cytosol	18.43	13.57
PGSC0003DMT400063293	Potato	nucleus	19.8	13.43
CDX85531	Canola	cytosol	15.7	13.41
GSMUA_Achr3P06300_001	Banana	cytosol	23.55	13.22
KXG22238	Sorghum	plastid	17.41	13.11
CDY26465	Canola	cytosol	15.02	12.98
KXG31176	Sorghum	plastid	15.02	12.36
Solyc03g114680.2.1	Tomato	nucleus	20.14	11.85
Bra023539.1-P	Field mustard	cytoskeleton, cytosol, nucleus	15.36	11.34

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.1	EntrezGene:8055372	UniProt:C5YJP3	EnsemblPlants:EES14331	ProteinID:EES14331
ProteinID:EES14331.1	GO:GO:0000209	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016740	GO:GO:0019538	GO:GO:0042787
GO:GO:0043161	GO:GO:0061630	InterPro:IPR001841	InterPro:IPR013083	PFAM:PF13639	PFscan:PS50089
PANTHER:PTHR44679	SMART:SM00184	EnsemblPlantsGene:SORBI_3007G224300	SUPFAM:SSF57850	UniParc:UPI0001A8780F	RefSeq:XP_002444836.1
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:65180238..65181119

Molecular Weight (calculated)

31098.6 Da

IEP (calculated)

4.050

GRAVY (calculated)

-0.248

Length

293 amino acids

Sequence
(BLAST)

001: MASSSIHIHR PRLAGDEIHR TLEASYSPSA SYCSDDAFVP VFRPDPSAPS ASASAAVAAA ADRVRSLFSS VDVALFRDAL FAPVCDGDGD RDGLGFTDAD
101: AEAAEYDGDL TSICWDCLEI EDADDPLVAS PAAEDFEWEE VVSPSGAAGE APEPEWEVLA DVPPPPATAA DAEDGFVYTS HHREEAAAYE VLVAGGEGMF
201: LKNKPPAARS AVEALPSAVV AAGQEGEGDE CAVCKDGVAA GQRVKRLPCS HRYHDDCIVP WLQVRNSCPL CRFELPTDDP EYESWKAGRA VAR

Best Arabidopsis Sequence Match ( AT5G08139.1 )
(BLAST)

001: MDDLLHQRVE QSQVTPPHDD SNIHGDFDNE ATDESRSETC SVVIEGNCDM VIELGLESGS VIVENLGDSD IDVSNDFDEP DDDDFFVGRT DFGLEFRDIA
101: SSGNDIRLIT VESGSDDDDG VENERELWGI DLNEEDVYVN DDDEYEDDDV SVTIPLCWDS LQLEDREVTA DEFDWEEVGG GGGGGVDDER EIRSGFAQID
201: MNDESLISAS PIISLEGLVT RERAEGSGNL GWEVLLNHTL EINFDVDNRE LYIGGDHDDY VQDYDMLFEQ FADAEVSVIG LPPTSKSFLN NLPVVLLEGE
301: NDDDGGLVCA VCKDEMNIGN KAVQLPCNHK YHSECIVPWL KVRNTCPVCR YELPTDDAEY EQRKTQRTTN TFGMVL

Arabidopsis Description

RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GYG0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.