Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02194 | Canola | peroxisome | 94.33 | 96.23 |
| AT5G60820.1 | Thale cress | cytosol | 75.86 | 73.51 |
| CDX78323 | Canola | cytosol | 34.48 | 48.61 |
| CDY69134 | Canola | cytosol | 33.74 | 47.08 |
| CDX69973 | Canola | cytosol | 39.16 | 44.17 |
| CDY21513 | Canola | cytosol | 37.44 | 42.7 |
| KRH56750 | Soybean | cytosol | 32.02 | 38.01 |
| KRH03189 | Soybean | nucleus | 32.76 | 37.46 |
| VIT_17s0000g04730.t01 | Wine grape | nucleus | 38.42 | 35.54 |
| PGSC0003DMT400063293 | Potato | nucleus | 34.98 | 32.87 |
| Os06t0633500-01 | Rice | cytosol, nucleus | 8.87 | 29.03 |
| CDX69496 | Canola | cytosol | 19.95 | 28.12 |
| Solyc03g114680.2.1 | Tomato | nucleus | 34.48 | 28.11 |
| GSMUA_Achr8P24510_001 | Banana | cytosol | 24.14 | 24.75 |
| CDY26465 | Canola | cytosol | 20.2 | 24.19 |
| Os08t0487500-01 | Rice | plastid | 15.27 | 22.88 |
| CDX82271 | Canola | cytosol | 11.82 | 22.54 |
| CDX75998 | Canola | nucleus | 10.59 | 22.4 |
| CDY34722 | Canola | cytosol | 21.43 | 22.31 |
| CDY34721 | Canola | cytosol | 21.43 | 22.31 |
| CDY36069 | Canola | cytosol | 11.82 | 22.12 |
| CDX81263 | Canola | cytosol, peroxisome, plastid | 15.27 | 21.38 |
| CDX94665 | Canola | nucleus | 12.32 | 21.28 |
| TraesCS7D01G246300.1 | Wheat | plastid | 14.04 | 21.19 |
| TraesCS7B01G144100.1 | Wheat | plastid | 14.04 | 21.19 |
| TraesCS7A01G247700.1 | Wheat | cytosol, plastid | 13.79 | 20.82 |
| Zm00001d031273_P001 | Maize | cytosol, plastid | 14.78 | 20.76 |
| CDY18690 | Canola | cytosol, peroxisome, plastid | 15.27 | 20.74 |
| EES14331 | Sorghum | plastid | 14.78 | 20.48 |
| CDY32333 | Canola | cytosol | 11.82 | 20.43 |
| CDY68603 | Canola | cytosol | 12.07 | 20.25 |
| TraesCS6A01G288800.1 | Wheat | cytosol, plastid | 15.27 | 20.2 |
| CDX85531 | Canola | cytosol | 16.75 | 19.83 |
| CDY72364 | Canola | cytosol | 10.84 | 19.82 |
| Zm00001d046663_P001 | Maize | cytosol | 14.53 | 19.8 |
| GSMUA_Achr3P06300_001 | Banana | cytosol | 25.12 | 19.54 |
| EER90075 | Sorghum | nucleus | 14.53 | 19.47 |
| CDX99105 | Canola | cytosol, plastid | 15.52 | 19.44 |
| Zm00001d051736_P001 | Maize | cytosol | 15.76 | 19.39 |
| CDY22790 | Canola | nucleus | 12.81 | 19.26 |
| CDY53450 | Canola | cytosol | 15.27 | 19.25 |
| TraesCS6B01G318600.1 | Wheat | cytosol, plastid | 14.53 | 19.22 |
| CDX90972 | Canola | cytosol | 15.76 | 19.1 |
| OQU85475 | Sorghum | cytosol | 15.02 | 19.06 |
| Os02t0727700-01 | Rice | cytosol, nucleus, plastid | 14.53 | 18.97 |
| CDX79968 | Canola | mitochondrion, nucleus | 13.79 | 18.86 |
| CDY61251 | Canola | cytosol | 16.75 | 18.84 |
| CDY22483 | Canola | mitochondrion | 14.04 | 18.81 |
| CDY23878 | Canola | mitochondrion, nucleus | 14.04 | 18.69 |
| CDX80258 | Canola | plastid | 16.01 | 18.31 |
| CDY35437 | Canola | mitochondrion, nucleus | 14.04 | 17.98 |
| CDY27204 | Canola | mitochondrion, nucleus | 13.55 | 17.63 |
| CDX74839 | Canola | cytosol, plastid | 14.04 | 17.59 |
| CDX72127 | Canola | mitochondrion | 13.55 | 17.41 |
| CDX88709 | Canola | cytosol, plastid | 16.75 | 17.26 |
| CDY33046 | Canola | plastid | 14.53 | 17.25 |
| CDX94901 | Canola | cytosol | 13.3 | 17.2 |
| CDY20473 | Canola | nucleus, plastid | 14.04 | 17.07 |
| CDY48679 | Canola | cytosol, plastid | 14.04 | 17.07 |
| CDY10554 | Canola | cytosol | 12.81 | 17.05 |
| CDY56022 | Canola | nucleus | 13.05 | 16.93 |
| CDY46577 | Canola | nucleus | 12.07 | 16.84 |
| CDY42507 | Canola | cytosol | 14.04 | 16.81 |
| CDX74533 | Canola | cytosol | 12.07 | 16.78 |
| HORVU6Hr1G072430.1 | Barley | cytosol | 14.53 | 16.21 |
| CDY24592 | Canola | nucleus | 12.81 | 16.2 |
| CDY25360 | Canola | cytosol, nucleus, plastid | 12.81 | 16.1 |
| CDY33437 | Canola | cytosol | 12.81 | 16.05 |
| CDY28208 | Canola | cytosol | 9.11 | 15.95 |
| CDY01669 | Canola | plastid | 12.56 | 15.79 |
| Zm00001d053704_P001 | Maize | cytosol | 13.79 | 15.73 |
| CDY43991 | Canola | nucleus | 11.82 | 15.53 |
| CDY07641 | Canola | nucleus | 14.29 | 15.51 |
| CDY56081 | Canola | nucleus | 9.11 | 15.48 |
| CDY32791 | Canola | nucleus | 13.3 | 15.34 |
| TraesCS7D01G387300.1 | Wheat | cytosol | 12.32 | 15.34 |
| OQU84547 | Sorghum | cytoskeleton, cytosol, nucleus | 14.53 | 15.25 |
| TraesCS6D01G160300.1 | Wheat | nucleus | 13.05 | 15.23 |
| CDY24951 | Canola | nucleus | 14.04 | 15.2 |
| TraesCS7B01G293600.1 | Wheat | cytosol | 12.32 | 15.15 |
| CDY56080 | Canola | cytosol | 10.59 | 15.14 |
| TraesCS7A01G391700.1 | Wheat | cytosol | 12.32 | 15.11 |
| CDY26096 | Canola | nucleus | 10.84 | 14.97 |
| CDY50031 | Canola | cytosol | 10.34 | 14.48 |
| Os02t0191500-01 | Rice | nucleus | 13.3 | 14.4 |
| HORVU6Hr1G034800.1 | Barley | cytosol, nucleus | 13.05 | 14.32 |
| CDX92768 | Canola | nucleus | 10.84 | 14.24 |
| CDY08249 | Canola | cytosol | 11.58 | 14.03 |
| CDY42740 | Canola | nucleus | 11.08 | 13.98 |
| CDY01221 | Canola | cytosol | 7.39 | 13.76 |
| CDX92770 | Canola | nucleus | 10.84 | 13.58 |
| CDY58938 | Canola | nucleus | 14.53 | 13.38 |
| CDY03622 | Canola | nucleus | 14.53 | 13.23 |
| TraesCS6B01G198800.1 | Wheat | nucleus | 13.05 | 13.22 |
| HORVU7Hr1G092570.1 | Barley | cytosol | 12.32 | 13.05 |
| CDX89343 | Canola | cytosol, mitochondrion | 10.84 | 12.5 |
| CDX94342 | Canola | mitochondrion, nucleus | 11.82 | 12.4 |
| CDY23599 | Canola | golgi, mitochondrion | 11.82 | 7.88 |
| CDY11934 | Canola | nucleus | 12.56 | 7.82 |
Protein Annotations
| EnsemblPlants:CDY51628 | EnsemblPlantsGene:GSBRNA2T00003869001 | Gene3D:3.30.40.10 | GO:A0A078IRA3 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR44290 | PFAM:PF13639 | PFscan:PS50089 | ProteinID:CDY51628 |
| ProteinID:CDY51628.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EF2B71 | UniProt:A0A078IRA3 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaCnng21200DBnaCnng21200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRA3]
Coordinates
chrLK033014:+:13579..14838
Molecular Weight (calculated)
46056.9 Da
IEP (calculated)
3.729
GRAVY (calculated)
-0.707
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEMSYLQIH DANDAVLTHF NRNHHQRRQH HQPLSQILDS LPHWVQSDDD VDLYVSQSDF ASEFDVSAAG GLDLLERRSF VMDLFHQRVE QSQVSPLGDD
101: YENRDMRVGS LALLDFGLGL ESGRGFVDCD DEEDDLFDGI RYLGMDSGDV RVTVESGFDS DVEEDDPEKE IWGVDLNEED EYVNDDDEEE EDDSVTIPLC
201: WDSLNLEDNE EFEWEEVDGD GDGDEREVSA EGDDNNSVSV SVSATISQED LAIGERRGYL GWEVLLNSRS LEFNLDDAES NMELYIGGDI DQQEEDDEDY
301: LHTTEYEMLF EAEISSGLGK PPASKSFIKN LKVSPLTKED VTEEDDDDAM CCAVCREEMS VGNEVAELPC RHKYHGECIV PWLGIRNTCP VCRFELPSDE
401: TEQSRF
101: YENRDMRVGS LALLDFGLGL ESGRGFVDCD DEEDDLFDGI RYLGMDSGDV RVTVESGFDS DVEEDDPEKE IWGVDLNEED EYVNDDDEEE EDDSVTIPLC
201: WDSLNLEDNE EFEWEEVDGD GDGDEREVSA EGDDNNSVSV SVSATISQED LAIGERRGYL GWEVLLNSRS LEFNLDDAES NMELYIGGDI DQQEEDDEDY
301: LHTTEYEMLF EAEISSGLGK PPASKSFIKN LKVSPLTKED VTEEDDDDAM CCAVCREEMS VGNEVAELPC RHKYHGECIV PWLGIRNTCP VCRFELPSDE
401: TEQSRF
001: MAEMSYLQID DANDAVFNHY RHQRRLHDHL RDQSFSQILY PLPHWIQSDD GDLYISETDF SSGDVSVSDL VFTTDDGLDL LDRRSFVMDL FHQRVEQSQV
101: TPLDNDGIDD FENYEMREDN VELDFGLEME SGNGFVDSDL VVNLNEHVDG MRLLGIESGD VIVTVESCFD SDDEDDQEKE ESEIWGIDLN EEDEYVNDDD
201: DNDDEEEDAS VTIPLCWDSL QLEDLGINNE DCEWEEVDSD DEREVLSVLA EADDNNSVSV SVAATISLED LAISERRGSS NLGWEVLLNS RSLEFNLDDA
301: ESNLELYIGD IDHEEEDYED YLHTTEYEML FEAEISSGIG KPPASKSFIK NLKVSPLSNE DVMENDDDAV CCAVCKEEMI VGKEVAELPC RHKYHSECIV
401: PWLGIRNTCP VCRFELPSD
101: TPLDNDGIDD FENYEMREDN VELDFGLEME SGNGFVDSDL VVNLNEHVDG MRLLGIESGD VIVTVESCFD SDDEDDQEKE ESEIWGIDLN EEDEYVNDDD
201: DNDDEEEDAS VTIPLCWDSL QLEDLGINNE DCEWEEVDSD DEREVLSVLA EADDNNSVSV SVAATISLED LAISERRGSS NLGWEVLLNS RSLEFNLDDA
301: ESNLELYIGD IDHEEEDYED YLHTTEYEML FEAEISSGIG KPPASKSFIK NLKVSPLSNE DVMENDDDAV CCAVCKEEMI VGKEVAELPC RHKYHSECIV
401: PWLGIRNTCP VCRFELPSD
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FJH4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.