Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34721 | Canola | cytosol | 97.44 | 97.44 |
| Bra021467.1-P | Field mustard | nucleus | 95.13 | 95.13 |
| AT3G02340.2 | Thale cress | cytosol | 66.67 | 63.57 |
| Os06t0633500-01 | Rice | cytosol, nucleus | 13.33 | 41.94 |
| CDX90972 | Canola | cytosol | 32.82 | 38.21 |
| CDX85531 | Canola | cytosol | 32.82 | 37.32 |
| VIT_14s0083g00710.t01 | Wine grape | nucleus | 29.74 | 29.67 |
| CDX69496 | Canola | cytosol | 21.28 | 28.82 |
| KRG93748 | Soybean | nucleus, plastid | 27.95 | 28.68 |
| Solyc02g089410.2.1 | Tomato | nucleus | 23.85 | 28.44 |
| KRH18313 | Soybean | nucleus | 27.18 | 28.34 |
| CDY26465 | Canola | cytosol | 24.1 | 27.73 |
| PGSC0003DMT400003515 | Potato | nucleus | 26.15 | 27.49 |
| CDY32333 | Canola | cytosol | 15.64 | 25.96 |
| Solyc02g065650.1.1 | Tomato | cytosol, nucleus, plastid | 26.41 | 25.94 |
| GSMUA_Achr8P24510_001 | Banana | cytosol | 25.64 | 25.25 |
| CDY68603 | Canola | cytosol | 15.64 | 25.21 |
| PGSC0003DMT400068309 | Potato | cytosol | 25.64 | 25.13 |
| CDX78323 | Canola | cytosol | 18.46 | 25.0 |
| CDX94665 | Canola | nucleus | 14.87 | 24.68 |
| Os08t0487500-01 | Rice | plastid | 16.92 | 24.35 |
| CDY69134 | Canola | cytosol | 17.95 | 24.05 |
| CDX81263 | Canola | cytosol, peroxisome, plastid | 17.18 | 23.1 |
| CDY36069 | Canola | cytosol | 12.82 | 23.04 |
| CDX82271 | Canola | cytosol | 12.56 | 23.0 |
| TraesCS7B01G144100.1 | Wheat | plastid | 15.64 | 22.68 |
| TraesCS7D01G246300.1 | Wheat | plastid | 15.64 | 22.68 |
| CDX69973 | Canola | cytosol | 20.77 | 22.5 |
| TraesCS6B01G318600.1 | Wheat | cytosol, plastid | 17.69 | 22.48 |
| CDY18690 | Canola | cytosol, peroxisome, plastid | 17.18 | 22.41 |
| CDX75998 | Canola | nucleus | 11.03 | 22.4 |
| TraesCS7A01G247700.1 | Wheat | cytosol, plastid | 15.38 | 22.3 |
| Os02t0727700-01 | Rice | cytosol, nucleus, plastid | 17.69 | 22.19 |
| CDY21513 | Canola | cytosol | 20.0 | 21.91 |
| GSMUA_Achr3P06300_001 | Banana | cytosol | 29.23 | 21.84 |
| TraesCS6A01G288800.1 | Wheat | cytosol, plastid | 17.18 | 21.82 |
| Zm00001d046663_P001 | Maize | cytosol | 16.67 | 21.81 |
| EER90075 | Sorghum | nucleus | 16.92 | 21.78 |
| CDY51628 | Canola | peroxisome | 22.31 | 21.43 |
| CDY02194 | Canola | peroxisome | 21.79 | 21.36 |
| OQU85475 | Sorghum | cytosol | 17.44 | 21.25 |
| CDY72364 | Canola | cytosol | 12.05 | 21.17 |
| Zm00001d031273_P001 | Maize | cytosol, plastid | 15.38 | 20.76 |
| Zm00001d051736_P001 | Maize | cytosol | 17.44 | 20.61 |
| EES14331 | Sorghum | plastid | 15.38 | 20.48 |
| TraesCS7D01G387300.1 | Wheat | cytosol | 16.92 | 20.25 |
| TraesCS7B01G293600.1 | Wheat | cytosol | 16.41 | 19.39 |
| TraesCS7A01G391700.1 | Wheat | cytosol | 16.41 | 19.34 |
| CDY22790 | Canola | nucleus | 13.33 | 19.26 |
| Zm00001d053704_P001 | Maize | cytosol | 16.92 | 18.54 |
| HORVU6Hr1G072430.1 | Barley | cytosol | 17.18 | 18.41 |
| CDY46577 | Canola | nucleus | 13.33 | 17.87 |
| OQU84547 | Sorghum | cytoskeleton, cytosol, nucleus | 17.44 | 17.57 |
| CDY42507 | Canola | cytosol | 15.13 | 17.4 |
| HORVU7Hr1G092570.1 | Barley | cytosol | 16.92 | 17.23 |
| CDX72127 | Canola | mitochondrion | 13.85 | 17.09 |
| CDY27204 | Canola | mitochondrion, nucleus | 13.59 | 16.99 |
| CDX79968 | Canola | mitochondrion, nucleus | 12.82 | 16.84 |
| CDY20473 | Canola | nucleus, plastid | 14.1 | 16.47 |
| CDY33437 | Canola | cytosol | 13.59 | 16.36 |
| CDY32791 | Canola | nucleus | 14.62 | 16.19 |
| CDX92768 | Canola | nucleus | 12.82 | 16.18 |
| CDY22483 | Canola | mitochondrion | 12.56 | 16.17 |
| TraesCS6D01G160300.1 | Wheat | nucleus | 14.36 | 16.09 |
| CDX99105 | Canola | cytosol, plastid | 13.33 | 16.05 |
| CDY24592 | Canola | nucleus | 13.08 | 15.89 |
| CDY43991 | Canola | nucleus | 12.56 | 15.86 |
| CDY42740 | Canola | nucleus | 13.08 | 15.84 |
| CDY25360 | Canola | cytosol, nucleus, plastid | 13.08 | 15.79 |
| CDY35437 | Canola | mitochondrion, nucleus | 12.82 | 15.77 |
| CDX74839 | Canola | cytosol, plastid | 13.08 | 15.74 |
| CDX92770 | Canola | nucleus | 13.08 | 15.74 |
| Os02t0191500-01 | Rice | nucleus | 15.13 | 15.73 |
| HORVU6Hr1G034800.1 | Barley | cytosol, nucleus | 14.87 | 15.68 |
| CDX94901 | Canola | cytosol | 12.56 | 15.61 |
| CDY53450 | Canola | cytosol | 12.82 | 15.53 |
| CDY50031 | Canola | cytosol | 11.54 | 15.52 |
| CDY23878 | Canola | mitochondrion, nucleus | 12.05 | 15.41 |
| CDY61251 | Canola | cytosol | 14.1 | 15.24 |
| CDY33046 | Canola | plastid | 13.33 | 15.2 |
| CDY24951 | Canola | nucleus | 14.62 | 15.2 |
| CDY56080 | Canola | cytosol | 11.03 | 15.14 |
| CDY01221 | Canola | cytosol | 8.46 | 15.14 |
| CDY28208 | Canola | cytosol | 8.97 | 15.09 |
| CDY10554 | Canola | cytosol | 11.79 | 15.08 |
| CDY56081 | Canola | nucleus | 9.23 | 15.06 |
| CDY56022 | Canola | nucleus | 12.05 | 15.02 |
| CDY07641 | Canola | nucleus | 14.36 | 14.97 |
| CDX80258 | Canola | plastid | 13.59 | 14.93 |
| CDY48679 | Canola | cytosol, plastid | 12.56 | 14.67 |
| CDY26096 | Canola | nucleus | 11.03 | 14.63 |
| CDX74533 | Canola | cytosol | 10.77 | 14.38 |
| CDX89343 | Canola | cytosol, mitochondrion | 12.82 | 14.2 |
| CDY58938 | Canola | nucleus | 15.9 | 14.06 |
| TraesCS6B01G198800.1 | Wheat | nucleus | 14.36 | 13.97 |
| CDY01669 | Canola | plastid | 11.54 | 13.93 |
| CDX88709 | Canola | cytosol, plastid | 13.85 | 13.71 |
| CDY03622 | Canola | nucleus | 15.64 | 13.68 |
| CDY08249 | Canola | cytosol | 11.54 | 13.43 |
| CDX94342 | Canola | mitochondrion, nucleus | 13.08 | 13.18 |
| CDY11934 | Canola | nucleus | 14.62 | 8.74 |
| CDY23599 | Canola | golgi, mitochondrion | 12.56 | 8.05 |
Protein Annotations
| EnsemblPlants:CDY34722 | EnsemblPlantsGene:GSBRNA2T00057247001 | Gene3D:3.30.40.10 | GO:A0A078HAH1 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR44679 | PANTHER:PTHR44679:SF3 | PFAM:PF13639 |
| PFscan:PS50089 | ProteinID:CDY34722 | ProteinID:CDY34722.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI0004EEE0B8 | UniProt:A0A078HAH1 | MapMan:35.1 | : | : | : |
Description
BnaA01g33030DBnaA01g33030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAH1]
Coordinates
chrLK032340:+:232330..233662
Molecular Weight (calculated)
43639.3 Da
IEP (calculated)
3.727
GRAVY (calculated)
-0.622
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTMKPCPI TNLEEEAEDG GAAVERSIFT QDDESTSVFV CDSPPFHDRD IDCDPYFPFA GHPISDSGSD SELDPYTCPI DFFDRETSEG VYLGSGGLTG
101: DDFNVWGFYE PKEEEEEREI VLGSRCESGS GSDQQPGLRV TGLDSDSDYE DDVFNFTSGE SENVANESGR VEVVTGLPPV WDYDLGDENE EWEEVRNAIN
201: WTVRAFSSSE EEEELSSQSR DDHEEEEEEE DHELDWQVLI TINNVVNYIE QAEGITIISG DMDPSYYTYL ATLGDGDAAD DVILGHMFDN EAGVRGNPPA
301: AKRVVEDLPV VELTVEEGDV VCAVCKDEMV LEEEVKRLPC RHLYHGECIT PWLGIRNTCP VCRFELPTDD VEYERQRRSQ RSNTSIFLAG
101: DDFNVWGFYE PKEEEEEREI VLGSRCESGS GSDQQPGLRV TGLDSDSDYE DDVFNFTSGE SENVANESGR VEVVTGLPPV WDYDLGDENE EWEEVRNAIN
201: WTVRAFSSSE EEEELSSQSR DDHEEEEEEE DHELDWQVLI TINNVVNYIE QAEGITIISG DMDPSYYTYL ATLGDGDAAD DVILGHMFDN EAGVRGNPPA
301: AKRVVEDLPV VELTVEEGDV VCAVCKDEMV LEEEVKRLPC RHLYHGECIT PWLGIRNTCP VCRFELPTDD VEYERQRRSQ RSNTSIFLAG
001: MASTKPDSAI NLEEEAEGDG VAVDDPIFIP ETTNLLVRYS PFDDRDIDCN PYFPFTGPIS DSGSGSYSDS EPDPNSCPID FFDRDSSDVD VAEYLESGGL
101: TAGDYNIWGF YDPKEDEEEE EIVLGTSGSD LQPGDSGEQG LRVTGIDSDS DCEDGVFDFI SEDSSGNRGN DSGRVEVGTG LPPVWDHLFG EGTVLADEEW
201: EEVQNAINWT AFSGPEDEDE EDELSSLSRD DEEEDHELDW QVLLTVNNVV NYIEQAEGIM LNPDDIDPDY YLYLSGLDEF DENHSGHYDA DAILGQMFDD
301: ETGIRGNPPA AKSVIQDLPV VELAVEELDK GNNVCAVCKD EMLVEEKVRR LPCSHFYHGE CIIPWLGIRN TCPVCRYELP TDDLEYERHK SSERGDTGLA
401: RNVLPGRYS
101: TAGDYNIWGF YDPKEDEEEE EIVLGTSGSD LQPGDSGEQG LRVTGIDSDS DCEDGVFDFI SEDSSGNRGN DSGRVEVGTG LPPVWDHLFG EGTVLADEEW
201: EEVQNAINWT AFSGPEDEDE EDELSSLSRD DEEEDHELDW QVLLTVNNVV NYIEQAEGIM LNPDDIDPDY YLYLSGLDEF DENHSGHYDA DAILGQMFDD
301: ETGIRGNPPA AKSVIQDLPV VELAVEELDK GNNVCAVCKD EMLVEEKVRR LPCSHFYHGE CIIPWLGIRN TCPVCRYELP TDDLEYERHK SSERGDTGLA
401: RNVLPGRYS
Arabidopsis Description
At3g02340 [Source:UniProtKB/TrEMBL;Acc:Q9FWA5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.