Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020313.1-P | Field mustard | plastid | 92.55 | 76.61 |
| CDY48679 | Canola | cytosol, plastid | 75.16 | 72.46 |
| CDX80258 | Canola | plastid | 75.16 | 68.17 |
| CDY33046 | Canola | plastid | 67.08 | 63.16 |
| CDX88709 | Canola | cytosol, plastid | 75.78 | 61.93 |
| CDY61251 | Canola | cytosol | 66.15 | 59.0 |
| CDX99105 | Canola | cytosol, plastid | 54.97 | 54.63 |
| AT5G59550.2 | Thale cress | nucleus, plastid | 77.64 | 48.83 |
| GSMUA_Achr7P15040_001 | Banana | mitochondrion | 47.83 | 48.73 |
| EER95109 | Sorghum | plastid | 41.3 | 48.36 |
| Os03t0271600-01 | Rice | plastid | 41.61 | 48.03 |
| Zm00001d028590_P001 | Maize | plastid | 41.3 | 47.84 |
| Zm00001d047824_P001 | Maize | plastid | 41.3 | 47.84 |
| TraesCS4A01G095800.1 | Wheat | cytosol | 40.99 | 47.14 |
| TraesCS4B01G209100.1 | Wheat | plastid | 40.99 | 47.14 |
| TraesCS4D01G209500.1 | Wheat | plastid | 40.99 | 47.14 |
| KRH10229 | Soybean | nucleus | 45.65 | 46.82 |
| KRH23103 | Soybean | nucleus | 45.65 | 46.82 |
| KRH24759 | Soybean | nucleus | 48.45 | 43.21 |
| KRH29763 | Soybean | nucleus | 48.45 | 43.21 |
| GSMUA_Achr6P23590_001 | Banana | mitochondrion, nucleus | 45.34 | 42.44 |
| GSMUA_Achr10P... | Banana | mitochondrion | 44.41 | 42.43 |
| Solyc06g005650.2.1 | Tomato | extracellular | 26.09 | 42.0 |
| CDX74839 | Canola | cytosol, plastid | 41.93 | 41.67 |
| GSMUA_AchrUn_... | Banana | mitochondrion, plastid | 44.41 | 40.74 |
| VIT_06s0004g05090.t01 | Wine grape | mitochondrion, nucleus | 48.45 | 40.41 |
| CDY20473 | Canola | nucleus, plastid | 41.61 | 40.12 |
| GSMUA_Achr2P19140_001 | Banana | mitochondrion | 44.72 | 39.78 |
| CDY07641 | Canola | nucleus | 45.03 | 38.77 |
| PGSC0003DMT400005512 | Potato | mitochondrion | 46.27 | 38.6 |
| HORVU7Hr1G055010.1 | Barley | cytosol | 26.4 | 38.46 |
| CDY24951 | Canola | nucleus | 44.72 | 38.4 |
| GSMUA_Achr5P07070_001 | Banana | nucleus | 39.13 | 38.3 |
| Zm00001d035677_P001 | Maize | plastid | 41.3 | 38.22 |
| TraesCS3D01G532300.1 | Wheat | cytosol | 45.34 | 37.82 |
| HORVU4Hr1G060130.1 | Barley | cytosol | 41.3 | 37.78 |
| Os05t0110000-01 | Rice | mitochondrion | 38.51 | 37.24 |
| TraesCS1A01G029800.1 | Wheat | cytosol | 45.96 | 37.09 |
| TraesCS3B01G595200.1 | Wheat | cytosol | 45.96 | 37.09 |
| TraesCS1D01G030300.1 | Wheat | nucleus | 46.27 | 37.06 |
| HORVU1Hr1G004330.14 | Barley | cytosol | 45.96 | 36.91 |
| TraesCS1B01G036900.1 | Wheat | cytosol | 45.65 | 36.84 |
| EES17560 | Sorghum | plastid | 46.89 | 36.56 |
| Zm00001d011076_P001 | Maize | plastid | 43.48 | 36.18 |
| GSMUA_Achr10P... | Banana | mitochondrion | 44.72 | 35.82 |
| GSMUA_Achr10P... | Banana | nucleus | 30.75 | 35.11 |
| Os01t0972000-01 | Rice | nucleus | 36.34 | 35.03 |
| HORVU3Hr1G041030.1 | Barley | mitochondrion | 39.13 | 32.56 |
| HORVU3Hr1G115000.7 | Barley | mitochondrion | 36.65 | 30.1 |
| CDY36069 | Canola | cytosol | 19.57 | 29.03 |
| CDX82271 | Canola | cytosol | 18.94 | 28.64 |
| CDY72364 | Canola | cytosol | 18.94 | 27.48 |
| CDY46577 | Canola | nucleus | 22.98 | 25.43 |
| CDX75998 | Canola | nucleus | 14.6 | 24.48 |
| CDY23878 | Canola | mitochondrion, nucleus | 22.98 | 24.26 |
| CDY22483 | Canola | mitochondrion | 22.67 | 24.09 |
| CDY35437 | Canola | mitochondrion, nucleus | 23.6 | 23.97 |
| CDX74533 | Canola | cytosol | 21.74 | 23.97 |
| CDY56022 | Canola | nucleus | 23.29 | 23.96 |
| CDY01669 | Canola | plastid | 23.91 | 23.84 |
| CDY50031 | Canola | cytosol | 21.43 | 23.79 |
| CDY24592 | Canola | nucleus | 23.6 | 23.68 |
| CDY10554 | Canola | cytosol | 22.36 | 23.61 |
| CDY32333 | Canola | cytosol | 17.08 | 23.4 |
| CDY68603 | Canola | cytosol | 17.39 | 23.14 |
| CDY26096 | Canola | nucleus | 21.12 | 23.13 |
| CDY27204 | Canola | mitochondrion, nucleus | 22.36 | 23.08 |
| CDX94665 | Canola | nucleus | 16.77 | 22.98 |
| CDY43991 | Canola | nucleus | 22.05 | 22.98 |
| CDX79968 | Canola | mitochondrion, nucleus | 21.12 | 22.9 |
| CDY33437 | Canola | cytosol | 22.98 | 22.84 |
| CDX72127 | Canola | mitochondrion | 22.36 | 22.78 |
| CDY25360 | Canola | cytosol, nucleus, plastid | 22.67 | 22.6 |
| CDY56080 | Canola | cytosol | 19.88 | 22.54 |
| CDX92768 | Canola | nucleus | 21.12 | 22.01 |
| CDY08249 | Canola | cytosol | 22.67 | 21.79 |
| CDY32791 | Canola | nucleus | 23.6 | 21.59 |
| CDY56081 | Canola | nucleus | 15.84 | 21.34 |
| CDY42740 | Canola | nucleus | 21.12 | 21.12 |
| CDX92770 | Canola | nucleus | 21.12 | 20.99 |
| CDY22790 | Canola | nucleus | 17.39 | 20.74 |
| CDX94901 | Canola | cytosol | 19.88 | 20.38 |
| CDX81263 | Canola | cytosol, peroxisome, plastid | 18.32 | 20.34 |
| CDY28208 | Canola | cytosol | 14.6 | 20.26 |
| CDX89343 | Canola | cytosol, mitochondrion | 21.74 | 19.89 |
| CDY18690 | Canola | cytosol, peroxisome, plastid | 18.32 | 19.73 |
| CDX94342 | Canola | mitochondrion, nucleus | 22.98 | 19.12 |
| CDY42507 | Canola | cytosol | 18.94 | 17.99 |
| CDY01221 | Canola | cytosol | 11.18 | 16.51 |
| CDY02194 | Canola | peroxisome | 19.25 | 15.58 |
| CDY51628 | Canola | peroxisome | 19.25 | 15.27 |
| CDY03622 | Canola | nucleus | 20.19 | 14.57 |
| CDY58938 | Canola | nucleus | 19.88 | 14.51 |
| CDX78323 | Canola | cytosol | 12.42 | 13.89 |
| CDY69134 | Canola | cytosol | 12.42 | 13.75 |
| CDX90972 | Canola | cytosol | 14.29 | 13.73 |
| CDX69973 | Canola | cytosol | 15.22 | 13.61 |
| CDY21513 | Canola | cytosol | 14.91 | 13.48 |
| CDX69496 | Canola | cytosol | 11.8 | 13.19 |
| CDX85531 | Canola | cytosol | 13.98 | 13.12 |
| CDY26465 | Canola | cytosol | 13.66 | 12.98 |
| CDY34722 | Canola | cytosol | 15.53 | 12.82 |
| CDY34721 | Canola | cytosol | 15.22 | 12.56 |
| CDY11934 | Canola | nucleus | 24.53 | 12.12 |
| CDY23599 | Canola | golgi, mitochondrion | 22.36 | 11.82 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078IQU4 | UniProt:A0A078IQU4 | EnsemblPlants:CDY53450 | ProteinID:CDY53450 |
| ProteinID:CDY53450.1 | InterPro:DUF1117 | EnsemblPlantsGene:GSBRNA2T00010712001 | InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF06547 |
| PFAM:PF13639 | PFAM:PF14369 | PFscan:PS50089 | PANTHER:PTHR44274 | PANTHER:PTHR44274:SF3 | SMART:SM00184 |
| SUPFAM:SSF57850 | UniParc:UPI0004EECF61 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
BnaA02g07020DBnaA02g07020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQU4]
Coordinates
chrLK033204:-:48321..50351
Molecular Weight (calculated)
34781.7 Da
IEP (calculated)
4.815
GRAVY (calculated)
-0.285
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSTPPTTPS TTSYWCYSCT RFVSVWAEHG TTEGLACPHC DSGFIEEVTD SSAAAAELAS PASAEVRSIN SSRRSVIRRR RSSRRPSFNP VIVLQGGAGE
101: GEDGDAARDR RAFEFYYDDG SGSGLRPLPD SVSEILMGSG FERSGNPPAS KSAIESLPRV EISDCHITAE ANCAVCTEVF EAETEAREMP CKHIFHEDCI
201: VPWLSIRNSC PVCRFEIPSE SNQQGSGEEG DSAVGMTIWR LPGGGFAVGR FNAAMRDGER VLPVVLTEMD GGGLGGNSEG PRRISWVRGN GAVESDGKTI
301: FPKLIRNTYF LFSLFLYSLG LV
101: GEDGDAARDR RAFEFYYDDG SGSGLRPLPD SVSEILMGSG FERSGNPPAS KSAIESLPRV EISDCHITAE ANCAVCTEVF EAETEAREMP CKHIFHEDCI
201: VPWLSIRNSC PVCRFEIPSE SNQQGSGEEG DSAVGMTIWR LPGGGFAVGR FNAAMRDGER VLPVVLTEMD GGGLGGNSEG PRRISWVRGN GAVESDGKTI
301: FPKLIRNTYF LFSLFLYSLG LV
001: MASGSYWCYS CSRFVWVSDS ISCPDCDGGF LELIQEPLDF TPSDSFTTTT TTQHRSPTRF PPPSSSSSTP SASMHADNSP TPTIVTRTRS NRSPNPVIVL
101: RGSAAAPSSD VVSEGLDRSA FQMYYDDGTD SGLRPLPPSM TEFLLGSGFD RLLDQISQIE LNTNRNLRSC EHPPASKSAI EALPLIEIDP THLLSDSQSH
201: CAVCKENFVL KSSAREMPCN HIYHPDCILP WLAIRNSCPV CRHELPAEDL TDGTGAALTA VTATAEEEED SAAGLTIWRL PGGGFAVGRI PGGWRGGDRM
301: MPVVYTEVDG GRLGDERLPR RVAWGSRRGG RDGGGSRERG GGFAGRIMRL FGCFSGSSGS IAAAAAASSG SGSRIRVTRR TRSFSMFSTA SSSSRRRNWL
401: A
101: RGSAAAPSSD VVSEGLDRSA FQMYYDDGTD SGLRPLPPSM TEFLLGSGFD RLLDQISQIE LNTNRNLRSC EHPPASKSAI EALPLIEIDP THLLSDSQSH
201: CAVCKENFVL KSSAREMPCN HIYHPDCILP WLAIRNSCPV CRHELPAEDL TDGTGAALTA VTATAEEEED SAAGLTIWRL PGGGFAVGRI PGGWRGGDRM
301: MPVVYTEVDG GRLGDERLPR RVAWGSRRGG RDGGGSRERG GGFAGRIMRL FGCFSGSSGS IAAAAAASSG SGSRIRVTRR TRSFSMFSTA SSSSRRRNWL
401: A
Arabidopsis Description
RHC2AProbable E3 ubiquitin-protein ligase RHC2A [Source:UniProtKB/Swiss-Prot;Acc:O22283]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.