Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH10229 | Soybean | nucleus | 94.59 | 94.59 |
| KRH24759 | Soybean | nucleus | 72.29 | 62.88 |
| KRH29763 | Soybean | nucleus | 71.66 | 62.33 |
| GSMUA_Achr7P15040_001 | Banana | mitochondrion | 56.05 | 55.7 |
| Os03t0271600-01 | Rice | plastid | 48.73 | 54.84 |
| TraesCS4A01G095800.1 | Wheat | cytosol | 47.77 | 53.57 |
| TraesCS4B01G209100.1 | Wheat | plastid | 47.77 | 53.57 |
| TraesCS4D01G209500.1 | Wheat | plastid | 47.77 | 53.57 |
| Solyc06g005650.2.1 | Tomato | extracellular | 34.08 | 53.5 |
| EER95109 | Sorghum | plastid | 46.82 | 53.45 |
| Zm00001d047824_P001 | Maize | plastid | 47.13 | 53.24 |
| Zm00001d028590_P001 | Maize | plastid | 46.82 | 52.88 |
| VIT_06s0004g05090.t01 | Wine grape | mitochondrion, nucleus | 64.33 | 52.33 |
| GSMUA_Achr10P... | Banana | mitochondrion | 52.55 | 48.96 |
| PGSC0003DMT400005512 | Potato | mitochondrion | 59.55 | 48.45 |
| KRH49133 | Soybean | plastid | 46.5 | 47.56 |
| KRG99997 | Soybean | plastid | 47.13 | 47.44 |
| GSMUA_Achr6P23590_001 | Banana | mitochondrion, nucleus | 51.27 | 46.8 |
| GSMUA_AchrUn_... | Banana | mitochondrion, plastid | 52.23 | 46.72 |
| Os05t0110000-01 | Rice | mitochondrion | 49.04 | 46.25 |
| KRG97885 | Soybean | mitochondrion | 52.23 | 45.94 |
| GSMUA_Achr2P19140_001 | Banana | mitochondrion | 52.87 | 45.86 |
| CDY53450 | Canola | cytosol | 46.82 | 45.65 |
| CDX80258 | Canola | plastid | 50.96 | 45.07 |
| KRH30994 | Soybean | nucleus | 56.37 | 45.04 |
| GSMUA_Achr5P07070_001 | Banana | nucleus | 46.18 | 44.07 |
| CDY61251 | Canola | cytosol | 50.64 | 44.04 |
| TraesCS3D01G532300.1 | Wheat | cytosol | 54.14 | 44.04 |
| Zm00001d035677_P001 | Maize | plastid | 48.73 | 43.97 |
| TraesCS3B01G595200.1 | Wheat | cytosol | 55.1 | 43.36 |
| TraesCS1B01G036900.1 | Wheat | cytosol | 55.1 | 43.36 |
| HORVU1Hr1G004330.14 | Barley | cytosol | 55.1 | 43.14 |
| TraesCS1A01G029800.1 | Wheat | cytosol | 54.78 | 43.11 |
| Bra019382.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 50.96 | 42.9 |
| GSMUA_Achr10P... | Banana | mitochondrion | 54.78 | 42.79 |
| HORVU4Hr1G060130.1 | Barley | cytosol | 47.77 | 42.61 |
| TraesCS1D01G030300.1 | Wheat | nucleus | 54.46 | 42.54 |
| HORVU7Hr1G055010.1 | Barley | cytosol | 29.94 | 42.53 |
| CDY48679 | Canola | cytosol, plastid | 45.22 | 42.52 |
| Bra020313.1-P | Field mustard | plastid | 52.55 | 42.42 |
| Bra002559.1-P | Field mustard | plastid | 52.87 | 41.81 |
| Bra006709.1-P | Field mustard | plastid | 51.91 | 41.48 |
| Zm00001d011076_P001 | Maize | plastid | 50.96 | 41.34 |
| CDX88709 | Canola | cytosol, plastid | 51.59 | 41.12 |
| AT3G46620.1 | Thale cress | cytosol, plastid | 51.27 | 40.76 |
| CDX99105 | Canola | cytosol, plastid | 42.04 | 40.74 |
| CDY33046 | Canola | plastid | 44.27 | 40.64 |
| EES17560 | Sorghum | plastid | 53.18 | 40.44 |
| Os01t0972000-01 | Rice | nucleus | 41.4 | 38.92 |
| HORVU3Hr1G041030.1 | Barley | mitochondrion | 47.45 | 38.5 |
| KRH15082 | Soybean | nucleus | 46.18 | 37.96 |
| KRH73053 | Soybean | nucleus | 47.13 | 37.85 |
| GSMUA_Achr10P... | Banana | nucleus | 33.44 | 37.23 |
| HORVU3Hr1G115000.7 | Barley | mitochondrion | 46.18 | 36.99 |
| AT5G59550.2 | Thale cress | nucleus, plastid | 52.55 | 32.23 |
| KRH71659 | Soybean | nucleus | 26.75 | 27.18 |
| KRH33121 | Soybean | nucleus | 26.75 | 27.18 |
| KRH18634 | Soybean | nucleus | 20.06 | 26.69 |
| KRH18631 | Soybean | nucleus | 25.8 | 26.47 |
| KRH36132 | Soybean | nucleus | 22.93 | 25.17 |
| KRH09399 | Soybean | nucleus | 29.3 | 24.93 |
| KRG90622 | Soybean | nucleus | 23.25 | 24.5 |
| KRH38895 | Soybean | nucleus | 29.3 | 24.47 |
| KRH14643 | Soybean | nucleus | 26.11 | 24.4 |
| KRH36150 | Soybean | nucleus | 25.8 | 24.32 |
| KRG90607 | Soybean | nucleus | 25.16 | 23.44 |
| KRH70139 | Soybean | nucleus | 23.25 | 22.88 |
| KRH10441 | Soybean | mitochondrion | 23.25 | 22.74 |
| KRH08483 | Soybean | cytosol, nucleus, plastid | 23.25 | 22.67 |
| KRH44018 | Soybean | mitochondrion | 22.61 | 22.4 |
| KRG97316 | Soybean | nucleus | 24.2 | 22.09 |
| KRH64713 | Soybean | nucleus | 24.2 | 21.59 |
| KRH73496 | Soybean | mitochondrion | 25.16 | 21.29 |
| KRH56750 | Soybean | cytosol | 16.88 | 15.5 |
| KRH18313 | Soybean | nucleus | 18.15 | 15.24 |
| KRG93748 | Soybean | nucleus, plastid | 17.83 | 14.74 |
| KRH03189 | Soybean | nucleus | 16.56 | 14.65 |
| KRH40635 | Soybean | nucleus, plastid | 23.25 | 13.25 |
| KRH00522 | Soybean | plastid | 22.93 | 12.88 |
Protein Annotations
| EntrezGene:100792020 | Gene3D:3.30.40.10 | MapMan:35.1 | EMBL:ACUP02008457 | InterPro:DUF1117 | EnsemblPlantsGene:GLYMA_13G338400 |
| GO:GO:0000209 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0042787 | GO:GO:0043161 |
| GO:GO:0061630 | UniProt:I1M4Y6 | InterPro:IPR001841 | InterPro:IPR013083 | EnsemblPlants:KRH23103 | ProteinID:KRH23103 |
| ProteinID:KRH23103.1 | PFAM:PF06547 | PFAM:PF13639 | PFAM:PF14369 | PFscan:PS50089 | PANTHER:PTHR44274 |
| PANTHER:PTHR44274:SF3 | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI000233AE04 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:43102330..43103957
Molecular Weight (calculated)
34654.9 Da
IEP (calculated)
6.914
GRAVY (calculated)
-0.387
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSDTTSYWC YSCTRFVHIQ EQNDVVCPRC HGGFVEKVTA PQSSRQGFRR RRRNAGNHSA FNPVIVLRGP GEDEESSFEL YYDGFDGEGL RPLPSTMSEF
101: LLGSGFDRLL EQVSQIEING LGRAENPPAS KAAIESMPTV EITESHVASE TICAVCKEAF ELGALAREMP CKHLYHSDCI LPWLSMRNSC PVCRHELPSE
201: QTAPETRVAG QIEEEAVGLT IWRLPGGGFA VGRFAGESHL PVVYTEMESD GNSNEGSRRI SLAVGSGRVR ESRGGGFGRI FRNLFGRIGA LTRSRSLSTS
301: LFNRRSSRAW VLGN
101: LLGSGFDRLL EQVSQIEING LGRAENPPAS KAAIESMPTV EITESHVASE TICAVCKEAF ELGALAREMP CKHLYHSDCI LPWLSMRNSC PVCRHELPSE
201: QTAPETRVAG QIEEEAVGLT IWRLPGGGFA VGRFAGESHL PVVYTEMESD GNSNEGSRRI SLAVGSGRVR ESRGGGFGRI FRNLFGRIGA LTRSRSLSTS
301: LFNRRSSRAW VLGN
001: MDPTNSRHGA SFEFSTRRFT LSTFGQNAPS LYVTTVYNSA IIYPVKHSPR VYLPSNPTPL IPLLRIALKT TFSFSHLQTS LSLLWSAILL SSSSQILSPS
101: KKILKMPSTP TTPTTTTPIT ASYWCYSCTR FVSVWADQGT TTVGSVACPH CDGGFIEQIN DSSSAATELT IPASTEVRSI NNNRRSVIRR RRSGRRPSFN
201: PVIVLQGGAG EREEGEEGDA ARDRRAFEFY YDDGSGSGLR PLPDSVSEIL MGSGFERLLE QLSQIEASAT GIGRSGNPPA SKSAIESLPR VEISDCHIGS
301: EANCAVCTEI FETETEAREM PCKHLFHDDC IVPWLSIRNS CPVCRFELPS EPNRRSNNNE EDNAVGMTIW RLPGGGFAVG RFNAAMRDGE RVLPVVLTEM
401: DGGGIGNSQD GPRRISWVRS HGTLESDSNG TGSGSGSGGR LRRMVRGMVS LMRRVRPNRS SSSSSAAIST SSDNLDLNIE VESRVLDRSN SVMRRYFRRN
501: RSNRDSSSSV LH
101: KKILKMPSTP TTPTTTTPIT ASYWCYSCTR FVSVWADQGT TTVGSVACPH CDGGFIEQIN DSSSAATELT IPASTEVRSI NNNRRSVIRR RRSGRRPSFN
201: PVIVLQGGAG EREEGEEGDA ARDRRAFEFY YDDGSGSGLR PLPDSVSEIL MGSGFERLLE QLSQIEASAT GIGRSGNPPA SKSAIESLPR VEISDCHIGS
301: EANCAVCTEI FETETEAREM PCKHLFHDDC IVPWLSIRNS CPVCRFELPS EPNRRSNNNE EDNAVGMTIW RLPGGGFAVG RFNAAMRDGE RVLPVVLTEM
401: DGGGIGNSQD GPRRISWVRS HGTLESDSNG TGSGSGSGGR LRRMVRGMVS LMRRVRPNRS SSSSSAAIST SSDNLDLNIE VESRVLDRSN SVMRRYFRRN
501: RSNRDSSSSV LH
Arabidopsis Description
zinc finger (C3HC4-type RING finger) family protein [Source:TAIR;Acc:AT5G59550]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.