Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG90622 | Soybean | nucleus | 89.16 | 85.57 |
| CDX82271 | Canola | cytosol | 36.01 | 48.36 |
| CDY36069 | Canola | cytosol | 36.36 | 47.93 |
| Bra001767.1-P | Field mustard | nucleus | 35.66 | 47.66 |
| CDY72364 | Canola | cytosol | 36.36 | 46.85 |
| CDY22790 | Canola | nucleus | 39.51 | 41.85 |
| Solyc04g009170.1.1 | Tomato | nucleus | 44.41 | 41.1 |
| Bra038246.1-P | Field mustard | nucleus | 46.5 | 40.92 |
| CDY24592 | Canola | nucleus | 45.8 | 40.81 |
| CDY33437 | Canola | cytosol | 45.8 | 40.43 |
| CDY25360 | Canola | cytosol, nucleus, plastid | 45.1 | 39.94 |
| PGSC0003DMT400082489 | Potato | nucleus | 44.76 | 39.75 |
| Bra035835.1-P | Field mustard | nucleus | 45.1 | 39.45 |
| Zm00001d045625_P001 | Maize | cytosol | 38.81 | 35.81 |
| CDY42507 | Canola | cytosol | 41.96 | 35.4 |
| AT3G19950.2 | Thale cress | cytosol | 47.55 | 35.23 |
| TraesCS7D01G000400.1 | Wheat | cytosol | 40.56 | 35.15 |
| TraesCS4A01G499200.1 | Wheat | cytosol, mitochondrion | 40.91 | 34.93 |
| KRH09399 | Soybean | nucleus | 44.41 | 34.42 |
| KRH38895 | Soybean | nucleus | 45.1 | 34.31 |
| EER89027 | Sorghum | nucleus | 38.11 | 33.96 |
| Os06t0101300-01 | Rice | nucleus | 38.81 | 32.84 |
| HORVU7Hr1G000850.1 | Barley | cytosol, mitochondrion, nucleus | 40.21 | 32.21 |
| KRH18631 | Soybean | nucleus | 27.62 | 25.82 |
| KRG97316 | Soybean | nucleus | 30.42 | 25.29 |
| KRH71659 | Soybean | nucleus | 26.22 | 24.27 |
| KRH33121 | Soybean | nucleus | 25.87 | 23.95 |
| KRH18634 | Soybean | nucleus | 19.23 | 23.31 |
| KRH10229 | Soybean | nucleus | 25.52 | 23.25 |
| KRH23103 | Soybean | nucleus | 25.17 | 22.93 |
| KRH14643 | Soybean | nucleus | 26.92 | 22.92 |
| KRH36150 | Soybean | nucleus | 26.22 | 22.52 |
| KRH49133 | Soybean | plastid | 23.78 | 22.15 |
| KRH10441 | Soybean | mitochondrion | 24.83 | 22.12 |
| KRG90607 | Soybean | nucleus | 25.87 | 21.96 |
| KRH08483 | Soybean | cytosol, nucleus, plastid | 24.48 | 21.74 |
| KRG99997 | Soybean | plastid | 23.43 | 21.47 |
| KRH29763 | Soybean | nucleus | 26.92 | 21.33 |
| KRH70139 | Soybean | nucleus | 23.78 | 21.32 |
| KRH64713 | Soybean | nucleus | 26.22 | 21.31 |
| KRG97885 | Soybean | mitochondrion | 26.57 | 21.29 |
| KRH30994 | Soybean | nucleus | 29.02 | 21.12 |
| KRH44018 | Soybean | mitochondrion | 23.08 | 20.82 |
| KRH73496 | Soybean | mitochondrion | 26.92 | 20.75 |
| KRH24759 | Soybean | nucleus | 25.52 | 20.22 |
| KRH73053 | Soybean | nucleus | 26.92 | 19.69 |
| KRH15082 | Soybean | nucleus | 26.22 | 19.63 |
| KRH56750 | Soybean | cytosol | 20.28 | 16.96 |
| KRH03189 | Soybean | nucleus | 20.28 | 16.34 |
| KRG93748 | Soybean | nucleus, plastid | 19.58 | 14.74 |
| KRH18313 | Soybean | nucleus | 19.23 | 14.71 |
| KRH40635 | Soybean | nucleus, plastid | 27.27 | 14.16 |
| KRH00522 | Soybean | plastid | 27.62 | 14.13 |
Protein Annotations
| EntrezGene:100797586 | Gene3D:3.30.40.10 | MapMan:35.1 | EMBL:ACUP02006721 | EnsemblPlantsGene:GLYMA_10G285300 | GO:GO:0000209 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0042787 | GO:GO:0043161 | GO:GO:0061630 |
| UniProt:I1LF85 | InterPro:IPR001841 | InterPro:IPR013083 | EnsemblPlants:KRH36132 | ProteinID:KRH36132 | ProteinID:KRH36132.1 |
| PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR44679 | PANTHER:PTHR44679:SF1 | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI000233D51E | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr10:+:50546572..50549228
Molecular Weight (calculated)
31778.5 Da
IEP (calculated)
4.350
GRAVY (calculated)
-0.701
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGGGGGKP FFCHVCSQRI TCSDESEPFC PMCMESFVEE CNPNNPNPNL FPDSDESSDP ELPFHRFSLL PLLLSSVSRS RSEPDVFDPM VFLQNHLQDL
101: RADGANIQVD FDHPSNENQG FRLANIGDYF MGPGLEQFIQ QLADNDPNRY GTPPAAKDAV ENLPTVTVDD DLLNSELNQC AVCQDEFEKG SKVTQMPCKH
201: AYHGDCLIPW LRLHNSCPVC RYELPTDDAD YENEVHGGDA GSRTGGSDGG GGSNRPFRRT VRIYLRHPDA GDSAQDGAER EWRWRS
101: RADGANIQVD FDHPSNENQG FRLANIGDYF MGPGLEQFIQ QLADNDPNRY GTPPAAKDAV ENLPTVTVDD DLLNSELNQC AVCQDEFEKG SKVTQMPCKH
201: AYHGDCLIPW LRLHNSCPVC RYELPTDDAD YENEVHGGDA GSRTGGSDGG GGSNRPFRRT VRIYLRHPDA GDSAQDGAER EWRWRS
001: MSSGVNSTGS AAAAPEVDKM FFCYQCNQTV TISISSSADP FCPICNQGFL EEYEDPNPNQ SLNFNPNSSD SFFPMADPFS TLLPLIFGSS AAAPSGMDFM
101: SLFGPSMQPQ ARSTQQNPQS DAFDPFTFLQ NHLQTLRSSG THFEFVIENH PSDPGNRMPG NFGDYFFGPG LEQLIQQLAE NDPNRYGTPP ASKSAIDALP
201: TVKVTKDMLK SEMNQCAVCM DEFEDGSDVK QMPCKHVFHQ DCLLPWLELH NSCPVCRFEL PTDDPDYENR SQGSQGSGDG QGSVEGQQTP RFSIQLPWPF
301: RRQDGSGSGS GAPGTGGGNL ETRGEDLD
101: SLFGPSMQPQ ARSTQQNPQS DAFDPFTFLQ NHLQTLRSSG THFEFVIENH PSDPGNRMPG NFGDYFFGPG LEQLIQQLAE NDPNRYGTPP ASKSAIDALP
201: TVKVTKDMLK SEMNQCAVCM DEFEDGSDVK QMPCKHVFHQ DCLLPWLELH NSCPVCRFEL PTDDPDYENR SQGSQGSGDG QGSVEGQQTP RFSIQLPWPF
301: RRQDGSGSGS GAPGTGGGNL ETRGEDLD
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.