Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH70139 | Soybean | nucleus | 94.1 | 94.98 |
| KRG97316 | Soybean | nucleus | 35.4 | 33.14 |
| GSMUA_Achr11P... | Banana | nucleus | 25.16 | 30.0 |
| Os05t0488800-01 | Rice | nucleus | 26.09 | 26.01 |
| Zm00001d013005_P002 | Maize | nucleus | 29.5 | 25.61 |
| Os03t0812200-01 | Rice | nucleus | 29.19 | 25.47 |
| TraesCS1B01G316300.1 | Wheat | nucleus | 25.47 | 24.7 |
| Zm00001d010635_P001 | Maize | nucleus | 23.91 | 24.68 |
| KRH36132 | Soybean | nucleus | 21.74 | 24.48 |
| TraesCS1D01G305300.1 | Wheat | nucleus | 25.16 | 24.4 |
| TraesCS5B01G480100.1 | Wheat | nucleus | 30.43 | 24.38 |
| KRG90622 | Soybean | nucleus | 22.36 | 24.16 |
| Zm00001d038528_P001 | Maize | cytosol | 24.84 | 24.02 |
| KXG37275 | Sorghum | nucleus | 28.57 | 24.02 |
| TraesCS5A01G467700.1 | Wheat | nucleus | 30.12 | 24.01 |
| TraesCS5D01G480800.1 | Wheat | nucleus | 30.12 | 24.01 |
| HORVU5Hr1G111530.1 | Barley | nucleus | 29.5 | 23.87 |
| KRG90607 | Soybean | nucleus | 24.53 | 23.44 |
| KRH23103 | Soybean | nucleus | 22.67 | 23.25 |
| KRH36150 | Soybean | nucleus | 23.91 | 23.12 |
| KRH10229 | Soybean | nucleus | 22.36 | 22.93 |
| KRG99997 | Soybean | plastid | 22.05 | 22.76 |
| KRH18634 | Soybean | nucleus | 16.46 | 22.46 |
| KRH49133 | Soybean | plastid | 21.12 | 22.15 |
| KXG22238 | Sorghum | plastid | 26.09 | 21.59 |
| KRH29763 | Soybean | nucleus | 23.91 | 21.33 |
| HORVU1Hr1G068950.2 | Barley | golgi | 25.47 | 21.24 |
| KRH18631 | Soybean | nucleus | 20.19 | 21.24 |
| KRG97885 | Soybean | mitochondrion | 22.36 | 20.17 |
| KRH30994 | Soybean | nucleus | 24.53 | 20.1 |
| KRH71659 | Soybean | nucleus | 19.25 | 20.06 |
| KRH09399 | Soybean | nucleus | 22.98 | 20.05 |
| KRH38895 | Soybean | nucleus | 23.29 | 19.95 |
| KRH24759 | Soybean | nucleus | 22.36 | 19.94 |
| KRH33121 | Soybean | nucleus | 18.94 | 19.74 |
| KRH10441 | Soybean | mitochondrion | 19.57 | 19.63 |
| KRH44018 | Soybean | mitochondrion | 18.94 | 19.24 |
| KRH14643 | Soybean | nucleus | 19.25 | 18.45 |
| KRH73496 | Soybean | mitochondrion | 20.5 | 17.79 |
| KRH73053 | Soybean | nucleus | 21.43 | 17.65 |
| KRH64713 | Soybean | nucleus | 19.25 | 17.61 |
| KRH15082 | Soybean | nucleus | 20.19 | 17.02 |
| KRH56750 | Soybean | cytosol | 15.22 | 14.33 |
| KRH18313 | Soybean | nucleus | 15.53 | 13.37 |
| KRH03189 | Soybean | nucleus | 14.6 | 13.24 |
| KRG93748 | Soybean | nucleus, plastid | 14.6 | 12.37 |
| KRH00522 | Soybean | plastid | 19.88 | 11.45 |
| KRH40635 | Soybean | nucleus, plastid | 19.57 | 11.43 |
Protein Annotations
| EntrezGene:100790855 | Gene3D:3.30.40.10 | MapMan:35.1 | EMBL:ACUP02010179 | EnsemblPlantsGene:GLYMA_16G152400 | GO:GO:0000209 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0042787 | GO:GO:0043161 | GO:GO:0061630 |
| InterPro:IPR001841 | InterPro:IPR013083 | UniProt:K7MHI0 | EnsemblPlants:KRH08483 | ProteinID:KRH08483 | ProteinID:KRH08483.1 |
| PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR44576 | PANTHER:PTHR44576:SF1 | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI00023D6C43 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr16:-:31301770..31303592
Molecular Weight (calculated)
35683.1 Da
IEP (calculated)
4.592
GRAVY (calculated)
-0.352
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MENDIEGVHW CNICSKMVNP MSDDENICPF CETEISEVMD NLRDQNDVVD LRSAWVFSLY APIFLGLMGV FSPSLARIAS HGGSSSRGVE EEVEQERENE
101: LVLGRRRRTS TYMMHLFRGL HVRMVSELEN PEDNRNMDGR SILVIDPFSE GALILRGPNL SHTSSPNESN AVGSSLNDLV VGSGFDLLLQ HLAQIGPGGY
201: SSVNPPAQKA AIEALPSVTS EEKLQCTVCL EDVEVGSEAK EMPCKHKFHG DCIVSWLKLH GSCPVCRFQM PSEDSTLEAN VGVGNGDNQN SELVRAGEER
301: PRNGRRNWFP VLQSFNNFLP YP
101: LVLGRRRRTS TYMMHLFRGL HVRMVSELEN PEDNRNMDGR SILVIDPFSE GALILRGPNL SHTSSPNESN AVGSSLNDLV VGSGFDLLLQ HLAQIGPGGY
201: SSVNPPAQKA AIEALPSVTS EEKLQCTVCL EDVEVGSEAK EMPCKHKFHG DCIVSWLKLH GSCPVCRFQM PSEDSTLEAN VGVGNGDNQN SELVRAGEER
301: PRNGRRNWFP VLQSFNNFLP YP
001: MEETMAARYW CHMCSQMVNP VMESEIKCPF CQSGFIEEMS GNGGGGGGRG IRDVQDSETD FGTDRALSLW APILLGMMSS PRRRRRFRRS EFGEENDDNG
101: DDLTTNADGN GNDSNNSNNN VYRHHRARRH GGEIDLDREF ESILRRRRRS SGNILQLLQG IRAGIASEYE SSDNNWDNSR ERDRVIMINP YNQSLVVPSD
201: QNQNHPSLTS LGDYFIGPGL DLLLQHLAEN DPNRQGTPPA RKEAVEALPT VKIMEPLQCS VCLDDFEKGT EAKEMPCKHK FHVRCIVPWL ELHSSCPVCR
301: FELPSSADDD DETKTDSERV LRTRNVRETS NGNVVENVGN ADRGREDEVR SGNGRRFSFP WPFSGLFSSS SSSSSSTSGS QSGENNFFSR SSGSSR
101: DDLTTNADGN GNDSNNSNNN VYRHHRARRH GGEIDLDREF ESILRRRRRS SGNILQLLQG IRAGIASEYE SSDNNWDNSR ERDRVIMINP YNQSLVVPSD
201: QNQNHPSLTS LGDYFIGPGL DLLLQHLAEN DPNRQGTPPA RKEAVEALPT VKIMEPLQCS VCLDDFEKGT EAKEMPCKHK FHVRCIVPWL ELHSSCPVCR
301: FELPSSADDD DETKTDSERV LRTRNVRETS NGNVVENVGN ADRGREDEVR SGNGRRFSFP WPFSGLFSSS SSSSSSTSGS QSGENNFFSR SSGSSR
Arabidopsis Description
ATCRT1RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FM98]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.