Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH08483 | Soybean | cytosol, nucleus, plastid | 94.98 | 94.1 |
| KRG97316 | Soybean | nucleus | 35.42 | 32.85 |
| GSMUA_Achr11P... | Banana | nucleus | 24.76 | 29.26 |
| Os05t0488800-01 | Rice | nucleus | 27.27 | 26.93 |
| TraesCS1B01G316300.1 | Wheat | nucleus | 26.65 | 25.6 |
| Os03t0812200-01 | Rice | nucleus | 29.47 | 25.47 |
| Zm00001d013005_P002 | Maize | nucleus | 29.47 | 25.34 |
| Zm00001d010635_P001 | Maize | nucleus | 24.76 | 25.32 |
| TraesCS1D01G305300.1 | Wheat | nucleus | 26.33 | 25.3 |
| Zm00001d038528_P001 | Maize | cytosol | 25.71 | 24.62 |
| KXG37275 | Sorghum | nucleus | 29.15 | 24.28 |
| TraesCS5B01G480100.1 | Wheat | nucleus | 30.09 | 23.88 |
| KRH36132 | Soybean | nucleus | 21.32 | 23.78 |
| TraesCS5D01G480800.1 | Wheat | nucleus | 29.78 | 23.51 |
| TraesCS5A01G467700.1 | Wheat | nucleus | 29.78 | 23.51 |
| KRG90607 | Soybean | nucleus | 24.76 | 23.44 |
| HORVU5Hr1G111530.1 | Barley | nucleus | 29.15 | 23.37 |
| KRH18634 | Soybean | nucleus | 17.24 | 23.31 |
| KRH23103 | Soybean | nucleus | 22.88 | 23.25 |
| KRH36150 | Soybean | nucleus | 24.14 | 23.12 |
| KRG99997 | Soybean | plastid | 22.57 | 23.08 |
| KRH10229 | Soybean | nucleus | 22.57 | 22.93 |
| KRG90622 | Soybean | nucleus | 21.32 | 22.82 |
| KRH49133 | Soybean | plastid | 21.63 | 22.48 |
| KRH18631 | Soybean | nucleus | 21.32 | 22.22 |
| KXG22238 | Sorghum | plastid | 26.96 | 22.11 |
| HORVU1Hr1G068950.2 | Barley | golgi | 26.65 | 22.02 |
| KRH71659 | Soybean | nucleus | 20.69 | 21.36 |
| KRH29763 | Soybean | nucleus | 23.82 | 21.05 |
| KRH33121 | Soybean | nucleus | 20.38 | 21.04 |
| KRH24759 | Soybean | nucleus | 22.26 | 19.67 |
| KRH10441 | Soybean | mitochondrion | 19.75 | 19.63 |
| KRG97885 | Soybean | mitochondrion | 21.94 | 19.61 |
| KRH30994 | Soybean | nucleus | 24.14 | 19.59 |
| KRH14643 | Soybean | nucleus | 20.38 | 19.35 |
| KRH44018 | Soybean | mitochondrion | 19.12 | 19.24 |
| KRH09399 | Soybean | nucleus | 22.26 | 19.24 |
| KRH38895 | Soybean | nucleus | 22.57 | 19.15 |
| KRH73496 | Soybean | mitochondrion | 21.94 | 18.87 |
| KRH64713 | Soybean | nucleus | 19.44 | 17.61 |
| KRH73053 | Soybean | nucleus | 21.0 | 17.14 |
| KRH15082 | Soybean | nucleus | 19.75 | 16.49 |
| KRH56750 | Soybean | cytosol | 15.36 | 14.33 |
| KRH18313 | Soybean | nucleus | 15.67 | 13.37 |
| KRH03189 | Soybean | nucleus | 14.73 | 13.24 |
| KRG93748 | Soybean | nucleus, plastid | 14.73 | 12.37 |
| KRH00522 | Soybean | plastid | 19.44 | 11.09 |
| KRH40635 | Soybean | nucleus, plastid | 18.81 | 10.89 |
Protein Annotations
| EntrezGene:100787884 | Gene3D:3.30.40.10 | MapMan:35.1 | EMBL:ACUP02000753 | EnsemblPlantsGene:GLYMA_02G071200 | GO:GO:0000209 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0042787 | GO:GO:0043161 | GO:GO:0061630 |
| InterPro:IPR001841 | InterPro:IPR013083 | UniProt:K7K6V8 | EnsemblPlants:KRH70139 | ProteinID:KRH70139 | ProteinID:KRH70139.1 |
| PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR44576 | PANTHER:PTHR44576:SF1 | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI000233737E | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr2:-:6253690..6255392
Molecular Weight (calculated)
35586.9 Da
IEP (calculated)
4.539
GRAVY (calculated)
-0.370
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MENDIEGVHW CNICSKMVNP MSDDENICPF CETEFSEVMD NLRDQNDVFD LRSAWVFSLY APIFLGLMGA FSPSLARIAP HGGSSSSRGV EEEVEQEREN
101: ELVLGRRRRT STYMMHLFRG LHIRMVSELE NPEDNNRNMD GSSILVIDPF SEGALIVRGP NLSHTTSSNE NNAVGSSLND LVVGSGFDLL LQHLAQIGPG
201: GYSSVNPPAQ KAAIEALPSV TSEEKFQCPV CLEDVEVGSE AKEMPCMHKF HGDCIVSWLK LHGSCPVCRF QMPSEDSTLE ANVDNRNSEL VRAGEERPRN
301: GRRNWFPVLQ SFNNFLPYP
101: ELVLGRRRRT STYMMHLFRG LHIRMVSELE NPEDNNRNMD GSSILVIDPF SEGALIVRGP NLSHTTSSNE NNAVGSSLND LVVGSGFDLL LQHLAQIGPG
201: GYSSVNPPAQ KAAIEALPSV TSEEKFQCPV CLEDVEVGSE AKEMPCMHKF HGDCIVSWLK LHGSCPVCRF QMPSEDSTLE ANVDNRNSEL VRAGEERPRN
301: GRRNWFPVLQ SFNNFLPYP
001: MSARYWCHMC SQMVNPVIGA EIKCPFCQSG FVEEMSREIN GGSSSSLREV QDPEIDFGTD RALSLWGPIL LGMMSNPRRR RRFRRTEFGV DNDEVNVSDD
101: VDGNDSVDID RHHHRRHRHR QQGREIDLDR EFESILRRRR RSSATILQLL QGIRAGIASE YESSDRDLLN QSAVVQGSTS LNQNRNNTSL SAIGDYFVGS
201: SLDHLLEHLA DNDSIRHGSL PARKEVVDNL PTVKISESLQ CSICLDDFDK GSEAKEMPCK HKFHIRCIVP WLELHSSCPV CRYELPPDDE TKVNPVRPRT
301: RTLEINVSNE NVEDDARNSN VSERRFSFPW PFSGLFSSSS SSSASASGSS HLGENS
101: VDGNDSVDID RHHHRRHRHR QQGREIDLDR EFESILRRRR RSSATILQLL QGIRAGIASE YESSDRDLLN QSAVVQGSTS LNQNRNNTSL SAIGDYFVGS
201: SLDHLLEHLA DNDSIRHGSL PARKEVVDNL PTVKISESLQ CSICLDDFDK GSEAKEMPCK HKFHIRCIVP WLELHSSCPV CRYELPPDDE TKVNPVRPRT
301: RTLEINVSNE NVEDDARNSN VSERRFSFPW PFSGLFSSSS SSSASASGSS HLGENS
Arabidopsis Description
AT4G26400 protein [Source:UniProtKB/TrEMBL;Acc:Q8L5Z3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.