Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH38895 | Soybean | nucleus | 93.77 | 92.02 |
| VIT_17s0053g00320.t01 | Wine grape | plastid | 50.41 | 50.41 |
| PGSC0003DMT400026380 | Potato | nucleus | 51.49 | 49.1 |
| Solyc03g098590.2.1 | Tomato | cytosol | 44.72 | 44.72 |
| KRH36132 | Soybean | nucleus | 34.42 | 44.41 |
| KRG90622 | Soybean | nucleus | 35.23 | 43.62 |
| PGSC0003DMT400069320 | Potato | nucleus | 40.92 | 37.56 |
| KRH18631 | Soybean | nucleus | 25.2 | 30.39 |
| KRH71659 | Soybean | nucleus | 25.2 | 30.1 |
| KRH33121 | Soybean | nucleus | 24.93 | 29.77 |
| KRH10229 | Soybean | nucleus | 24.93 | 29.3 |
| KRH23103 | Soybean | nucleus | 24.93 | 29.3 |
| KRH14643 | Soybean | nucleus | 25.47 | 27.98 |
| KRG97316 | Soybean | nucleus | 25.47 | 27.33 |
| KRH44018 | Soybean | mitochondrion | 23.04 | 26.81 |
| KRH10441 | Soybean | mitochondrion | 23.04 | 26.48 |
| KRH49133 | Soybean | plastid | 21.95 | 26.38 |
| KRH29763 | Soybean | nucleus | 25.75 | 26.32 |
| KRG99997 | Soybean | plastid | 22.22 | 26.28 |
| KRH36150 | Soybean | nucleus | 23.04 | 25.53 |
| KRH24759 | Soybean | nucleus | 24.93 | 25.48 |
| KRH18634 | Soybean | nucleus | 15.99 | 25.0 |
| KRG97885 | Soybean | mitochondrion | 24.12 | 24.93 |
| KRG90607 | Soybean | nucleus | 22.76 | 24.93 |
| KRH30994 | Soybean | nucleus | 26.29 | 24.68 |
| KRH15082 | Soybean | nucleus | 25.47 | 24.61 |
| KRH73496 | Soybean | mitochondrion | 24.66 | 24.53 |
| KRH64713 | Soybean | nucleus | 23.31 | 24.43 |
| KRH73053 | Soybean | nucleus | 24.93 | 23.53 |
| KRH08483 | Soybean | cytosol, nucleus, plastid | 20.05 | 22.98 |
| KRH70139 | Soybean | nucleus | 19.24 | 22.26 |
| KRH56750 | Soybean | cytosol | 17.89 | 19.3 |
| KRH18313 | Soybean | nucleus | 18.43 | 18.18 |
| KRH03189 | Soybean | nucleus | 17.07 | 17.75 |
| KRG93748 | Soybean | nucleus, plastid | 17.89 | 17.37 |
| KRH40635 | Soybean | nucleus, plastid | 22.76 | 15.24 |
| KRH00522 | Soybean | plastid | 22.49 | 14.85 |
Protein Annotations
| EntrezGene:100818686 | Gene3D:3.30.40.10 | MapMan:35.1 | EMBL:ACUP02010276 | EnsemblPlantsGene:GLYMA_16G213500 | GO:GO:0000209 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0042787 | GO:GO:0043161 | GO:GO:0061630 |
| InterPro:IPR001841 | InterPro:IPR013083 | UniProt:K7MIW9 | EnsemblPlants:KRH09399 | ProteinID:KRH09399 | ProteinID:KRH09399.1 |
| PFAM:PF13639 | PFAM:PF14369 | PFscan:PS50089 | PANTHER:PTHR44679 | PANTHER:PTHR44679:SF3 | SMART:SM00184 |
| SUPFAM:SSF57850 | UniParc:UPI000233F06D | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr16:-:37154069..37158311
Molecular Weight (calculated)
38909.3 Da
IEP (calculated)
4.269
GRAVY (calculated)
-0.586
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSAGGDRGG GATSGDPRQY FCHQCNRTVS ISPSPSSDLL CPTCNGGFLE ELEFPIPNPN PNPPNPFFPD FPLAGAATIP LVLPGAAASP PFEDLSALFG
101: NRPDAAADAF NPLVFLQNYF QTLRAGGNLQ LVIESGDPGG AFRFPGVTHG DYFFGPGLEE LIQHLAENDP NRYGTPPASK SVVEGLPDVS VTEELLASDS
201: SQCAVCKDTF ELGETAKQIP CKHIYHADCI LPWLELHNSC PVCRYELPTD DPDYEQRARR GGSGGGGAAG SGAAPQVNWN MALGSGGSAD SSGSGGGDNS
301: QRRRFRVSLP WPFRQFAETS NVGSGNNDSN NNNNSNSNSD SSGNNGGQSN SGNRGNQNFD SETRQEDLD
101: NRPDAAADAF NPLVFLQNYF QTLRAGGNLQ LVIESGDPGG AFRFPGVTHG DYFFGPGLEE LIQHLAENDP NRYGTPPASK SVVEGLPDVS VTEELLASDS
201: SQCAVCKDTF ELGETAKQIP CKHIYHADCI LPWLELHNSC PVCRYELPTD DPDYEQRARR GGSGGGGAAG SGAAPQVNWN MALGSGGSAD SSGSGGGDNS
301: QRRRFRVSLP WPFRQFAETS NVGSGNNDSN NNNNSNSNSD SSGNNGGQSN SGNRGNQNFD SETRQEDLD
001: MGFSPKSVII VSELESATYD ITENYFSLSS DGSFLPSSSR FFCFVVSLSR SEKFAESVMS SGVNSTGSAA AAPEVDKMFF CYQCNQTVTI SISSSADPFC
101: PICNQGFLEE YEDPNPNQSL NFNPNSSDSF FPMADPFSTL LPLIFGSSAA APSGMDFMSL FGPSMQPQAR STQQNPQSDA FDPFTFLQNH LQTLRSSGTH
201: FEFVIENHPS DPGNRMPGNF GDYFFGPGLE QLIQQLAEND PNRYGTPPAS KSAIDALPTV KVTKDMLKSE MNQCAVCMDE FEDGSDVKQM PCKHVFHQDC
301: LLPWLELHNS CPVCRFELPT DDPDYENRSQ GSQGSGDGQG SVEGQQTPRF SIQLPWPFRR QDGSGSGSGA PGTGGGNLET RGEDLD
101: PICNQGFLEE YEDPNPNQSL NFNPNSSDSF FPMADPFSTL LPLIFGSSAA APSGMDFMSL FGPSMQPQAR STQQNPQSDA FDPFTFLQNH LQTLRSSGTH
201: FEFVIENHPS DPGNRMPGNF GDYFFGPGLE QLIQQLAEND PNRYGTPPAS KSAIDALPTV KVTKDMLKSE MNQCAVCMDE FEDGSDVKQM PCKHVFHQDC
301: LLPWLELHNS CPVCRFELPT DDPDYENRSQ GSQGSGDGQG SVEGQQTPRF SIQLPWPFRR QDGSGSGSGA PGTGGGNLET RGEDLD
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQQ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.