Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG37275 | Sorghum | nucleus | 74.25 | 71.54 |
| HORVU5Hr1G111530.1 | Barley | nucleus | 76.69 | 71.11 |
| TraesCS5B01G480100.1 | Wheat | nucleus | 76.69 | 70.4 |
| TraesCS5D01G480800.1 | Wheat | nucleus | 76.96 | 70.3 |
| TraesCS5A01G467700.1 | Wheat | nucleus | 76.15 | 69.55 |
| Zm00001d013005_P002 | Maize | nucleus | 69.38 | 69.0 |
| GSMUA_Achr11P... | Banana | nucleus | 36.59 | 50.0 |
| CDY46577 | Canola | nucleus | 36.86 | 46.74 |
| KRG97316 | Soybean | nucleus | 42.55 | 45.64 |
| VIT_06s0004g00120.t01 | Wine grape | nucleus | 44.99 | 45.11 |
| PGSC0003DMT400046527 | Potato | nucleus | 43.63 | 44.72 |
| Os05t0488800-01 | Rice | nucleus | 38.21 | 43.65 |
| Bra027436.1-P | Field mustard | nucleus | 36.31 | 43.37 |
| CDY43991 | Canola | nucleus | 36.31 | 43.37 |
| CDX92768 | Canola | nucleus | 35.5 | 42.39 |
| AT3G13430.2 | Thale cress | nucleus | 36.04 | 42.22 |
| Bra002823.1-P | Field mustard | nucleus | 40.11 | 42.05 |
| CDY32791 | Canola | nucleus | 39.84 | 41.76 |
| CDY10554 | Canola | cytosol | 34.15 | 41.31 |
| CDY56022 | Canola | nucleus | 34.69 | 40.89 |
| Bra030854.1-P | Field mustard | nucleus | 34.42 | 40.71 |
| AT5G56340.1 | Thale cress | nucleus | 43.63 | 40.66 |
| CDY26096 | Canola | nucleus | 32.25 | 40.48 |
| CDX92770 | Canola | nucleus | 35.5 | 40.43 |
| AT1G55530.2 | Thale cress | nucleus | 37.94 | 39.89 |
| Bra037109.1-P | Field mustard | nucleus | 36.04 | 39.82 |
| CDY08249 | Canola | cytosol | 35.77 | 39.4 |
| CDY42740 | Canola | nucleus | 34.15 | 39.13 |
| CDY56080 | Canola | cytosol | 30.08 | 39.08 |
| Bra019109.1-P | Field mustard | nucleus | 33.88 | 38.82 |
| AT4G26400.1 | Thale cress | nucleus | 37.13 | 38.48 |
| CDY28208 | Canola | cytosol | 23.85 | 37.93 |
| Bra011215.1-P | Field mustard | cytosol | 23.85 | 37.93 |
| Os03t0324900-01 | Rice | cytosol | 32.52 | 37.5 |
| Bra026444.1-P | Field mustard | nucleus | 37.4 | 37.2 |
| CDY50031 | Canola | cytosol | 28.73 | 36.55 |
| Bra037999.1-P | Field mustard | nucleus | 28.46 | 36.21 |
| CDX89343 | Canola | cytosol, mitochondrion | 34.42 | 36.08 |
| Solyc01g050040.2.1 | Tomato | nucleus | 28.18 | 35.62 |
| CDY56081 | Canola | nucleus | 22.76 | 35.15 |
| CDX94342 | Canola | mitochondrion, nucleus | 35.5 | 33.85 |
| Os01t0276600-01 | Rice | nucleus | 30.08 | 33.74 |
| KRH70139 | Soybean | nucleus | 25.47 | 29.47 |
| KRH08483 | Soybean | cytosol, nucleus, plastid | 25.47 | 29.19 |
| Os03t0351800-01 | Rice | nucleus | 21.95 | 28.62 |
| Os06t0633500-01 | Rice | cytosol, nucleus | 9.49 | 28.23 |
| Bra028935.1-P | Field mustard | nucleus | 42.01 | 27.29 |
| Os03t0271600-01 | Rice | plastid | 19.24 | 25.45 |
| Os06t0101300-01 | Rice | nucleus | 22.49 | 24.56 |
| CDY11934 | Canola | nucleus | 42.01 | 23.77 |
| Os05t0495000-00 | Rice | mitochondrion | 17.89 | 23.08 |
| Os01t0802000-01 | Rice | nucleus | 20.33 | 22.8 |
| Os10t0487400-01 | Rice | mitochondrion, nucleus, plastid, vacuole | 22.22 | 22.16 |
| Os08t0487500-01 | Rice | plastid | 16.26 | 22.14 |
| CDY23599 | Canola | golgi, mitochondrion | 36.04 | 21.84 |
| Os05t0110000-01 | Rice | mitochondrion | 18.43 | 20.42 |
| Os02t0767600-00 | Rice | mitochondrion | 17.07 | 19.21 |
| Os01t0972000-01 | Rice | nucleus | 16.8 | 18.56 |
| Os02t0727700-01 | Rice | cytosol, nucleus, plastid | 14.09 | 16.72 |
| Os02t0191500-01 | Rice | nucleus | 16.53 | 16.27 |
| Os11t0119200-01 | Rice | nucleus | 17.07 | 12.83 |
| Os12t0118700-01 | Rice | nucleus | 17.34 | 12.83 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.1 | EntrezGene:4334547 | ProteinID:AAP73861.1 | ProteinID:AAR89864.1 | ProteinID:ABF99507.1 |
| EMBL:AK060419 | EMBL:AK067585 | ProteinID:BAF13592.1 | ProteinID:BAS87014.1 | ncoils:Coil | ProteinID:EAZ29029.1 |
| GO:GO:0000209 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0043161 | GO:GO:0061630 |
| InterPro:IPR001841 | InterPro:IPR013083 | EnsemblPlantsGene:Os03g0812200 | EnsemblPlants:Os03t0812200-01 | PFAM:PF13639 | PFAM:PF14369 |
| PFscan:PS50089 | PANTHER:PTHR44576 | PANTHER:PTHR44576:SF4 | UniProt:Q7XZF6 | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI00001AA3E3 | RefSeq:XP_015632029.1 | RefSeq:XP_015632030.1 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
RING finger proteinZinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0812200-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0812200-02)
Coordinates
chr3:+:34031452..34034030
Molecular Weight (calculated)
41501.5 Da
IEP (calculated)
4.259
GRAVY (calculated)
-0.926
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQGQGDRYW CHHCEEVIEP VEPDMKCPSC DSGFVEEMGS AGFEPSTNLR SDRISLWAPL LLGMMGGSSR RARRLRRQIM EDDDDDDDDE DDEDDSDHEL
101: EDLFRRQRRG SSLVRLLQTL RDDLRGLDDI GRDSDRDRER ERRERERLRE RERERERMRE RERERRRERT ESLILINSNN EAIILQGTFG PDDNQDDSSN
201: TSSGVSLGDY FLGPGLDILL QHLAESDLNR SGTPPAKKEA VEALPTVNIQ EVLGCSVCLE DFEMGTEAKE MPCQHKFHSQ CILPWLELHS SCPICRFQLP
301: TEESKNPCES AGGIVSVNDD GDDAGTSSDV DSANQPGSPI FSALSALFSN PSSSSSSSSD DNAPHSSES
101: EDLFRRQRRG SSLVRLLQTL RDDLRGLDDI GRDSDRDRER ERRERERLRE RERERERMRE RERERRRERT ESLILINSNN EAIILQGTFG PDDNQDDSSN
201: TSSGVSLGDY FLGPGLDILL QHLAESDLNR SGTPPAKKEA VEALPTVNIQ EVLGCSVCLE DFEMGTEAKE MPCQHKFHSQ CILPWLELHS SCPICRFQLP
301: TEESKNPCES AGGIVSVNDD GDDAGTSSDV DSANQPGSPI FSALSALFSN PSSSSSSSSD DNAPHSSES
001: MEEAVVTRYW CHMCSQTVNP VMEAEIKCPF CQSGFVEEME DDDDHDSSDP ADVRANNSLW APILMELMND PVRRRRNQSV ESVEDNQNEV QTENNEDDGE
101: NDLDWQLQEI LRRRRRHSAA VLQLLQGIRA GLSVESESTG NGGNNPGRVI LINTSNQTIT VQNSADMDSV PAGSLGDYFI GPGFEMLLQR LAENDPNRYG
201: TPPAKKEAVE ALATVKIEET LQCSVCLDDF EIGTEAKLMP CTHKFHSDCL LPWLELHSSC PVCRYQLPAD EAKTDSVTTT SDNNGSSSAS ATTSHGAENS
301: DGNRRQEEEE EEEEEEEEEN ENNDGSGFSI PWPFSTLFSS SQDSNAPTDS S
101: NDLDWQLQEI LRRRRRHSAA VLQLLQGIRA GLSVESESTG NGGNNPGRVI LINTSNQTIT VQNSADMDSV PAGSLGDYFI GPGFEMLLQR LAENDPNRYG
201: TPPAKKEAVE ALATVKIEET LQCSVCLDDF EIGTEAKLMP CTHKFHSDCL LPWLELHSSC PVCRYQLPAD EAKTDSVTTT SDNNGSSSAS ATTSHGAENS
301: DGNRRQEEEE EEEEEEEEEN ENNDGSGFSI PWPFSTLFSS SQDSNAPTDS S
Arabidopsis Description
At1g55530/T5A14_7 [Source:UniProtKB/TrEMBL;Acc:Q9ZVU8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.