Factsheet for Os03t0324900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G129800.1	Wheat	cytosol	65.94	65.12
Zm00001d047560_P001	Maize	cytosol	62.5	64.72
KXG39475	Sorghum	cytosol	63.44	63.24
HORVU4Hr1G051610.2	Barley	cytosol	65.62	60.87
TraesCS4B01G174800.1	Wheat	cytosol	65.31	59.71
TraesCS4D01G176700.1	Wheat	cytosol	64.38	59.2
GSMUA_Achr9P05060_001	Banana	nucleus	25.0	43.01
GSMUA_Achr7P18340_001	Banana	nucleus	37.5	40.0
GSMUA_Achr5P07680_001	Banana	nucleus	36.88	39.6
GSMUA_Achr6P08590_001	Banana	nucleus	35.31	38.57
GSMUA_Achr10P...	Banana	nucleus	35.0	36.96
Os01t0276600-01	Rice	nucleus	35.0	34.04
Os03t0812200-01	Rice	nucleus	37.5	32.52
Os06t0633500-01	Rice	cytosol, nucleus	12.5	32.26
Os05t0488800-01	Rice	nucleus	31.88	31.58
Os03t0351800-01	Rice	nucleus	25.31	28.62
Os03t0271600-01	Rice	plastid	23.44	26.88
Os05t0495000-00	Rice	mitochondrion	22.81	25.52
Os06t0101300-01	Rice	nucleus	25.62	24.26
Os10t0487400-01	Rice	mitochondrion, nucleus, plastid, vacuole	27.5	23.78
Os01t0802000-01	Rice	nucleus	22.5	21.88
Os08t0487500-01	Rice	plastid	18.44	21.77
Os05t0110000-01	Rice	mitochondrion	21.88	21.02
Os01t0972000-01	Rice	nucleus	21.25	20.36
Os02t0767600-00	Rice	mitochondrion	20.31	19.82
Os02t0727700-01	Rice	cytosol, nucleus, plastid	18.75	19.29
Os02t0191500-01	Rice	nucleus	17.5	14.93
Os11t0119200-01	Rice	nucleus	17.81	11.61
Os12t0118700-01	Rice	nucleus	16.88	10.82

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.1	EntrezGene:4332701	ProteinID:ABF95705.1	EMBL:AK068144	ProteinID:BAF11896.1
ProteinID:BAS83978.1	GO:GO:0000209	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016740	GO:GO:0019538	GO:GO:0043161
GO:GO:0061630	InterPro:IPR001841	InterPro:IPR013083	EnsemblPlantsGene:Os03g0324900	EnsemblPlants:Os03t0324900-01	PFAM:PF13639
PFAM:PF14369	PFscan:PS50089	PANTHER:PTHR44576	PANTHER:PTHR44576:SF2	UniProt:Q10M33	SMART:SM00184
SUPFAM:SSF57850	UniParc:UPI0000DB4D66	RefSeq:XP_015628230.1	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0324900-01)

Coordinates

chr3:+:11816467..11818149

Molecular Weight (calculated)

33725.0 Da

IEP (calculated)

4.384

GRAVY (calculated)

-0.435

Length

320 amino acids

Sequence
(BLAST)

001: MEEEPSATCR YFCHMCSLIV RPEMGIEEVK CPHCHSGFVE EMVGGDDDDG RRSGNAAAGG RGAASEENAD DEATPAPPPW APMLIDLLGV SSRRHGLDDG
101: SSDLAAFARR QYRNIAFLQL LSALQDDDEA GGDTPGDSGR ERLVLVTPAD GNGAAATSGF TLGDLFLGPG LDLLLDYLAD TDPNRQGTPP ARKEAVAALP
201: TVRVHDAAGA TCPVCLDEFE AGGEAREMPC KHRFHDGCIL PWLEAHSSCP VCRYQLPTDD EPTAGNVVVA AEGGDELIGN ARGGGGDGDG DGGSSGRRRW
301: LSWPFGGLFS HRSSRRSSSS

Best Arabidopsis Sequence Match ( AT1G55530.2 )
(BLAST)

001: MEEAVVTRYW CHMCSQTVNP VMEAEIKCPF CQSGFVEEME DDDDHDSSDP ADVRANNSLW APILMELMND PVRRRRNQSV ESVEDNQNEV QTENNEDDGE
101: NDLDWQLQEI LRRRRRHSAA VLQLLQGIRA GLSVESESTG NGGNNPGRVI LINTSNQTIT VQNSADMDSV PAGSLGDYFI GPGFEMLLQR LAENDPNRYG
201: TPPAKKEAVE ALATVKIEET LQCSVCLDDF EIGTEAKLMP CTHKFHSDCL LPWLELHSSC PVCRYQLPAD EAKTDSVTTT SDNNGSSSAS ATTSHGAENS
301: DGNRRQEEEE EEEEEEEEEN ENNDGSGFSI PWPFSTLFSS SQDSNAPTDS S

Arabidopsis Description

At1g55530/T5A14_7 [Source:UniProtKB/TrEMBL;Acc:Q9ZVU8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.