Factsheet for Os05t0110000-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G029800.1	Wheat	cytosol	85.89	71.68
TraesCS1B01G036900.1	Wheat	cytosol	84.98	70.93
TraesCS1D01G030300.1	Wheat	nucleus	85.29	70.65
HORVU1Hr1G004330.14	Barley	cytosol	84.98	70.57
Zm00001d035677_P001	Maize	plastid	70.27	67.24
EES17560	Sorghum	plastid	77.18	62.23
Zm00001d011076_P001	Maize	plastid	69.37	59.69
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	57.06	54.13
Os03t0271600-01	Rice	plastid	44.14	52.69
VIT_06s0004g05090.t01	Wine grape	mitochondrion, nucleus	59.16	51.04
GSMUA_Achr6P23590_001	Banana	mitochondrion, nucleus	52.25	50.58
Os01t0972000-01	Rice	nucleus	50.15	50.0
KRH23103	Soybean	nucleus	46.25	49.04
KRH10229	Soybean	nucleus	45.95	48.73
PGSC0003DMT400005512	Potato	mitochondrion	55.86	48.19
KRH24759	Soybean	nucleus	51.95	47.92
KRH29763	Soybean	nucleus	51.05	47.09
KRG97885	Soybean	mitochondrion	50.45	47.06
Solyc04g011610.1.1	Tomato	nucleus	55.56	46.84
PGSC0003DMT400016233	Potato	nucleus	54.95	46.45
KRH30994	Soybean	nucleus	53.45	45.29
CDY20473	Canola	nucleus, plastid	44.74	44.61
Bra005020.1-P	Field mustard	nucleus, plastid	44.14	43.11
CDX74839	Canola	cytosol, plastid	41.14	42.28
Solyc06g005650.2.1	Tomato	extracellular	24.92	41.5
Bra000143.1-P	Field mustard	nucleus	45.95	40.8
CDY07641	Canola	nucleus	45.65	40.64
CDY24951	Canola	nucleus	45.35	40.27
CDX80258	Canola	plastid	42.04	39.44
CDY53450	Canola	cytosol	37.24	38.51
CDY61251	Canola	cytosol	41.74	38.5
AT2G39720.2	Thale cress	nucleus	46.25	38.4
Bra020313.1-P	Field mustard	plastid	44.44	38.05
KRH15082	Soybean	nucleus	43.54	37.96
Bra006709.1-P	Field mustard	plastid	44.74	37.91
CDX88709	Canola	cytosol, plastid	44.74	37.82
Bra019382.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	42.04	37.53
KRH73053	Soybean	nucleus	43.84	37.34
Bra002559.1-P	Field mustard	plastid	44.14	37.03
CDX99105	Canola	cytosol, plastid	35.44	36.42
CDY48679	Canola	cytosol, plastid	36.34	36.23
AT3G46620.1	Thale cress	cytosol, plastid	42.94	36.2
CDY33046	Canola	plastid	36.64	35.67
Os06t0633500-01	Rice	cytosol, nucleus	12.61	33.87
AT5G59550.2	Thale cress	nucleus, plastid	44.14	28.71
Os03t0351800-01	Rice	nucleus	22.22	26.15
Os05t0495000-00	Rice	mitochondrion	18.92	22.03
Os03t0324900-01	Rice	cytosol	21.02	21.88
Os08t0487500-01	Rice	plastid	17.42	21.4
Os01t0802000-01	Rice	nucleus	20.72	20.97
Os02t0767600-00	Rice	mitochondrion	20.42	20.73
Os06t0101300-01	Rice	nucleus	20.12	19.82
Os10t0487400-01	Rice	mitochondrion, nucleus, plastid, vacuole	21.92	19.73
Os05t0488800-01	Rice	nucleus	18.62	19.2
Os02t0727700-01	Rice	cytosol, nucleus, plastid	17.72	18.97
Os01t0276600-01	Rice	nucleus	18.32	18.54
Os03t0812200-01	Rice	nucleus	20.42	18.43
Os02t0191500-01	Rice	nucleus	16.52	14.67
Os11t0119200-01	Rice	nucleus	18.32	12.42
Os12t0118700-01	Rice	nucleus	18.32	12.22

Protein Annotations

MapMan:26.7.1	Gene3D:3.30.40.10	ProteinID:AAU44196.1	ProteinID:BAF16351.2	ProteinID:BAS91909.1	InterPro:DUF1117
GO:GO:0000209	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016740	GO:GO:0019538	GO:GO:0043161	GO:GO:0061630
InterPro:IPR001841	InterPro:IPR013083	EnsemblPlantsGene:Os05g0110000	EnsemblPlants:Os05t0110000-01	PFAM:PF06547	PFAM:PF13639
PFscan:PS50089	PANTHER:PTHR44274	PANTHER:PTHR44274:SF3	UniProt:Q65XW6	SMART:SM00184	SUPFAM:SSF57850
UniParc:UPI000043F3B7	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

RING finger proteinZinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0110000-01)

Coordinates

chr5:+:538304..539630

Molecular Weight (calculated)

36252.3 Da

IEP (calculated)

8.511

GRAVY (calculated)

-0.568

Length

333 amino acids

Sequence
(BLAST)

001: MSAPPPRAAY LRRPRAHHAN DLRLRRTRRA AAAAAAGDRS PFNPVIVLRR SPAAAGDDDS LAAATSFELF YDDGAGSGLR PLPETMSDFL MGSGFERLLD
101: QLTQIEAGGL ARARENPPAS KASVESMPTV TIAASHVGAD SHCAVCKEPF ELGDEAREMP CSHIYHQDCI LPWLALRNSC PVCRHEMPTD AARPRPSNAG
201: TEEETVGLTI WRLPGGGFAV GRFAGGRRPE ERELPVVYTE MDGGFNNGGA PRRISWGSRQ SRSTERSAIR RIFRNVFSCF GRSHSSNSQA SSSHSRPELN
301: DASDRSAVFS HGSRSRSTSW RLEDGHADAM VQR

Best Arabidopsis Sequence Match ( AT5G59550.2 )
(BLAST)

001: MDPTNSRHGA SFEFSTRRFT LSTFGQNAPS LYVTTVYNSA IIYPVKHSPR VYLPSNPTPL IPLLRIALKT TFSFSHLQTS LSLLWSAILL SSSSQILSPS
101: KKILKMPSTP TTPTTTTPIT ASYWCYSCTR FVSVWADQGT TTVGSVACPH CDGGFIEQIN DSSSAATELT IPASTEVRSI NNNRRSVIRR RRSGRRPSFN
201: PVIVLQGGAG EREEGEEGDA ARDRRAFEFY YDDGSGSGLR PLPDSVSEIL MGSGFERLLE QLSQIEASAT GIGRSGNPPA SKSAIESLPR VEISDCHIGS
301: EANCAVCTEI FETETEAREM PCKHLFHDDC IVPWLSIRNS CPVCRFELPS EPNRRSNNNE EDNAVGMTIW RLPGGGFAVG RFNAAMRDGE RVLPVVLTEM
401: DGGGIGNSQD GPRRISWVRS HGTLESDSNG TGSGSGSGGR LRRMVRGMVS LMRRVRPNRS SSSSSAAIST SSDNLDLNIE VESRVLDRSN SVMRRYFRRN
501: RSNRDSSSSV LH

Arabidopsis Description

zinc finger (C3HC4-type RING finger) family protein [Source:TAIR;Acc:AT5G59550]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.