Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra019382.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 95.99 | 83.38 |
CDY61251 | Canola | cytosol | 91.98 | 82.55 |
AT3G46620.1 | Thale cress | cytosol, plastid | 81.48 | 66.84 |
CDY33046 | Canola | plastid | 68.21 | 64.62 |
CDY48679 | Canola | cytosol, plastid | 66.05 | 64.07 |
CDX80258 | Canola | plastid | 66.05 | 60.28 |
CDY53450 | Canola | cytosol | 54.63 | 54.97 |
CDX88709 | Canola | cytosol, plastid | 64.81 | 53.3 |
Os03t0271600-01 | Rice | plastid | 37.65 | 43.73 |
EER95109 | Sorghum | plastid | 37.04 | 43.64 |
GSMUA_AchrUn_... | Banana | mitochondrion, plastid | 47.22 | 43.59 |
Zm00001d028590_P001 | Maize | plastid | 37.04 | 43.17 |
Zm00001d047824_P001 | Maize | plastid | 37.04 | 43.17 |
TraesCS4A01G095800.1 | Wheat | cytosol | 36.73 | 42.5 |
TraesCS4B01G209100.1 | Wheat | plastid | 36.73 | 42.5 |
TraesCS4D01G209500.1 | Wheat | plastid | 36.73 | 42.5 |
GSMUA_Achr7P15040_001 | Banana | mitochondrion | 41.05 | 42.09 |
KRH10229 | Soybean | nucleus | 40.74 | 42.04 |
KRH23103 | Soybean | nucleus | 40.74 | 42.04 |
VIT_06s0004g05090.t01 | Wine grape | mitochondrion, nucleus | 46.91 | 39.38 |
GSMUA_Achr10P... | Banana | mitochondrion | 40.43 | 38.87 |
KRH24759 | Soybean | nucleus | 43.21 | 38.78 |
GSMUA_Achr6P23590_001 | Banana | mitochondrion, nucleus | 41.05 | 38.66 |
KRH29763 | Soybean | nucleus | 42.9 | 38.5 |
CDY20473 | Canola | nucleus, plastid | 38.58 | 37.43 |
CDX74839 | Canola | cytosol, plastid | 37.35 | 37.35 |
Zm00001d035677_P001 | Maize | plastid | 39.81 | 37.07 |
PGSC0003DMT400005512 | Potato | mitochondrion | 44.14 | 37.05 |
GSMUA_Achr2P19140_001 | Banana | mitochondrion | 41.05 | 36.74 |
GSMUA_Achr5P07070_001 | Banana | nucleus | 37.04 | 36.47 |
TraesCS3D01G532300.1 | Wheat | cytosol | 42.59 | 35.75 |
Os05t0110000-01 | Rice | mitochondrion | 36.42 | 35.44 |
TraesCS3B01G595200.1 | Wheat | cytosol | 43.52 | 35.34 |
TraesCS1A01G029800.1 | Wheat | cytosol | 42.59 | 34.59 |
GSMUA_Achr10P... | Banana | mitochondrion | 42.9 | 34.58 |
TraesCS1B01G036900.1 | Wheat | cytosol | 42.28 | 34.34 |
CDY07641 | Canola | nucleus | 39.51 | 34.22 |
HORVU4Hr1G060130.1 | Barley | cytosol | 37.04 | 34.09 |
TraesCS1D01G030300.1 | Wheat | nucleus | 42.28 | 34.08 |
HORVU1Hr1G004330.14 | Barley | cytosol | 41.98 | 33.92 |
CDY24951 | Canola | nucleus | 39.2 | 33.87 |
Os01t0972000-01 | Rice | nucleus | 33.95 | 32.93 |
EES17560 | Sorghum | plastid | 41.98 | 32.93 |
Zm00001d011076_P001 | Maize | plastid | 38.89 | 32.56 |
Solyc06g005650.2.1 | Tomato | extracellular | 20.06 | 32.5 |
HORVU3Hr1G041030.1 | Barley | mitochondrion | 37.35 | 31.27 |
GSMUA_Achr10P... | Banana | nucleus | 26.54 | 30.5 |
HORVU7Hr1G055010.1 | Barley | cytosol | 20.37 | 29.86 |
HORVU3Hr1G115000.7 | Barley | mitochondrion | 36.11 | 29.85 |
CDX94665 | Canola | nucleus | 19.75 | 27.23 |
CDY68603 | Canola | cytosol | 20.06 | 26.86 |
CDX82271 | Canola | cytosol | 17.28 | 26.29 |
CDY36069 | Canola | cytosol | 17.59 | 26.27 |
CDY32333 | Canola | cytosol | 18.83 | 25.96 |
CDY72364 | Canola | cytosol | 17.59 | 25.68 |
CDX75998 | Canola | nucleus | 14.81 | 25.0 |
CDY22483 | Canola | mitochondrion | 22.53 | 24.09 |
CDX79968 | Canola | mitochondrion, nucleus | 21.3 | 23.23 |
CDY23878 | Canola | mitochondrion, nucleus | 21.6 | 22.95 |
CDY26096 | Canola | nucleus | 20.68 | 22.79 |
CDX81263 | Canola | cytosol, peroxisome, plastid | 20.37 | 22.76 |
CDY18690 | Canola | cytosol, peroxisome, plastid | 20.68 | 22.41 |
CDY35437 | Canola | mitochondrion, nucleus | 21.91 | 22.4 |
CDY33437 | Canola | cytosol | 22.22 | 22.22 |
CDY24592 | Canola | nucleus | 21.91 | 22.12 |
CDY46577 | Canola | nucleus | 19.75 | 21.99 |
CDY10554 | Canola | cytosol | 20.68 | 21.97 |
CDY01221 | Canola | cytosol | 14.51 | 21.56 |
CDY27204 | Canola | mitochondrion, nucleus | 20.68 | 21.47 |
CDY25360 | Canola | cytosol, nucleus, plastid | 21.3 | 21.36 |
CDX72127 | Canola | mitochondrion | 20.68 | 21.2 |
CDY22790 | Canola | nucleus | 17.59 | 21.11 |
CDY56022 | Canola | nucleus | 20.37 | 21.09 |
CDY50031 | Canola | cytosol | 18.52 | 20.69 |
CDY01669 | Canola | plastid | 20.37 | 20.43 |
CDX74533 | Canola | cytosol | 17.9 | 19.86 |
CDY43991 | Canola | nucleus | 18.83 | 19.74 |
CDY08249 | Canola | cytosol | 20.37 | 19.7 |
CDX92768 | Canola | nucleus | 17.9 | 18.77 |
CDY32791 | Canola | nucleus | 20.37 | 18.75 |
CDY56080 | Canola | cytosol | 16.36 | 18.66 |
CDY56081 | Canola | nucleus | 13.58 | 18.41 |
CDY42740 | Canola | nucleus | 17.9 | 18.01 |
CDX92770 | Canola | nucleus | 17.9 | 17.9 |
CDX89343 | Canola | cytosol, mitochondrion | 19.44 | 17.9 |
CDX94901 | Canola | cytosol | 16.98 | 17.52 |
CDY42507 | Canola | cytosol | 18.21 | 17.4 |
CDX94342 | Canola | mitochondrion, nucleus | 20.06 | 16.8 |
CDX78323 | Canola | cytosol | 14.2 | 15.97 |
CDY28208 | Canola | cytosol | 11.42 | 15.95 |
CDY02194 | Canola | peroxisome | 19.44 | 15.83 |
CDY51628 | Canola | peroxisome | 19.44 | 15.52 |
CDY69134 | Canola | cytosol | 13.89 | 15.46 |
CDY58938 | Canola | nucleus | 19.75 | 14.51 |
CDY03622 | Canola | nucleus | 19.75 | 14.35 |
CDX69496 | Canola | cytosol | 12.35 | 13.89 |
CDY21513 | Canola | cytosol | 15.12 | 13.76 |
CDX85531 | Canola | cytosol | 14.51 | 13.7 |
CDX69973 | Canola | cytosol | 15.12 | 13.61 |
CDX90972 | Canola | cytosol | 13.89 | 13.43 |
CDY34721 | Canola | cytosol | 16.05 | 13.33 |
CDY34722 | Canola | cytosol | 16.05 | 13.33 |
CDY26465 | Canola | cytosol | 13.89 | 13.27 |
CDY11934 | Canola | nucleus | 22.53 | 11.2 |
CDY23599 | Canola | golgi, mitochondrion | 18.83 | 10.02 |
Protein Annotations
EnsemblPlants:CDX99105 | EnsemblPlantsGene:GSBRNA2T00107254001 | Gene3D:3.30.40.10 | GO:A0A078EAI1 | InterPro:DUF1117 | InterPro:IPR001841 |
InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR44274 | PANTHER:PTHR44274:SF3 | PFAM:PF06547 |
PFAM:PF13639 | PFAM:PF14369 | PFscan:PS50089 | ProteinID:CDX99105 | ProteinID:CDX99105.1 | SEG:seg |
SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EE87FA | MapMan:35.1 | : | : |
Description
BnaA06g17960D
Coordinates
chrLK031908:+:368728..370366
Molecular Weight (calculated)
35162.2 Da
IEP (calculated)
5.514
GRAVY (calculated)
-0.431
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSRSATTTA APTTTETTTS YWCYSCTRFV SVSTGGGYVL CPYCNGGFIE EVEDSSAAEA PTTTTPVPQV ADIENEEGDR RPYEFYYDDG SGSGLRALPE
101: SIEASGNGIG RSGNPPASKS AIESLPRVEM GELHIKAEAN CAVCTEVFEA GAEGREMPCK HIFHGDCIVP WLSIRNSCPV CRFELPSDPV RRSNEEEEPA
201: VGMTIWRLPG GGFAVGRFNA AMREGERILP VVLTEVDGGG LGSNEGPRRI SWVRDHGTPE ISRNAARAGR LRRAARGMIS FMRRMRPNLR ASSSSSSSSN
301: VIDLDTNGES RVMNRSTSLI RRFF
101: SIEASGNGIG RSGNPPASKS AIESLPRVEM GELHIKAEAN CAVCTEVFEA GAEGREMPCK HIFHGDCIVP WLSIRNSCPV CRFELPSDPV RRSNEEEEPA
201: VGMTIWRLPG GGFAVGRFNA AMREGERILP VVLTEVDGGG LGSNEGPRRI SWVRDHGTPE ISRNAARAGR LRRAARGMIS FMRRMRPNLR ASSSSSSSSN
301: VIDLDTNGES RVMNRSTSLI RRFF
001: MMPNSRSATI TPTTESTTTT TTTTTTLTTS YWCYSCTRFI SVWEDQDANA GVLCPYCNGG FIEEIEDSSN STVAAIPAST PEVRSVEETH RSIIRRRRSN
101: RRTSFNPVIV LHGGGGGGAG ERVENEEGDG ATRERRAYEF YYDDGSGSGL RPLPDSVSEI LMGSGFERLL EQLSQIEASG NGIGRSGNPP ASKSAIESLP
201: RVEISDCHTK AEANCAVCTE VFEAGIEGRE MPCKHIFHGD CIVPWLSIRN SCPVCRFELP SDPIQRSNEE EHAVGMTIWR LPGGGFAVGR FNAGVREGER
301: ILPVVLTEMD GGGLGSNEGP RRISWVRAHE TPEMSRNGGR SGNGGRLRRA VRGMVSFMRR VRPSRGSSNS NVIDLDSDGE TRVMNRSTSL IRRFF
101: RRTSFNPVIV LHGGGGGGAG ERVENEEGDG ATRERRAYEF YYDDGSGSGL RPLPDSVSEI LMGSGFERLL EQLSQIEASG NGIGRSGNPP ASKSAIESLP
201: RVEISDCHTK AEANCAVCTE VFEAGIEGRE MPCKHIFHGD CIVPWLSIRN SCPVCRFELP SDPIQRSNEE EHAVGMTIWR LPGGGFAVGR FNAGVREGER
301: ILPVVLTEMD GGGLGSNEGP RRISWVRAHE TPEMSRNGGR SGNGGRLRRA VRGMVSFMRR VRPSRGSSNS NVIDLDSDGE TRVMNRSTSL IRRFF
Arabidopsis Description
RDUF1E3 ubiquitin-protein ligase RDUF1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SNB6]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.