Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014266.1-P | Field mustard | nucleus | 98.87 | 98.87 |
| CDY03622 | Canola | nucleus | 96.37 | 95.29 |
| AT5G01980.1 | Thale cress | nucleus | 75.28 | 67.34 |
| CDY01221 | Canola | cytosol | 32.2 | 65.14 |
| KRH00522 | Soybean | plastid | 46.71 | 36.85 |
| KRH40635 | Soybean | nucleus, plastid | 45.58 | 36.48 |
| PGSC0003DMT400071362 | Potato | nucleus | 38.1 | 35.52 |
| VIT_08s0056g00320.t01 | Wine grape | mitochondrion | 47.39 | 35.42 |
| GSMUA_Achr4P02460_001 | Banana | nucleus | 30.39 | 32.37 |
| CDX82271 | Canola | cytosol | 14.74 | 30.52 |
| CDY36069 | Canola | cytosol | 14.74 | 29.95 |
| TraesCS5D01G146400.1 | Wheat | nucleus | 34.47 | 29.92 |
| CDY72364 | Canola | cytosol | 14.97 | 29.73 |
| TraesCS5A01G145800.1 | Wheat | nucleus | 34.24 | 29.61 |
| TraesCS5B01G144700.1 | Wheat | nucleus | 33.79 | 29.22 |
| Os11t0119200-01 | Rice | nucleus | 32.2 | 28.92 |
| Os12t0118700-01 | Rice | nucleus | 31.75 | 28.06 |
| CDX75998 | Canola | nucleus | 11.11 | 25.52 |
| CDX94665 | Canola | nucleus | 12.93 | 24.26 |
| CDY32333 | Canola | cytosol | 12.93 | 24.26 |
| CDY22790 | Canola | nucleus | 14.74 | 24.07 |
| CDY68603 | Canola | cytosol | 13.15 | 23.97 |
| CDY22483 | Canola | mitochondrion | 16.33 | 23.76 |
| CDY33437 | Canola | cytosol | 17.23 | 23.46 |
| CDY24592 | Canola | nucleus | 17.01 | 23.36 |
| CDY35437 | Canola | mitochondrion, nucleus | 16.78 | 23.34 |
| CDY23878 | Canola | mitochondrion, nucleus | 16.1 | 23.28 |
| CDX79968 | Canola | mitochondrion, nucleus | 15.65 | 23.23 |
| CDY25360 | Canola | cytosol, nucleus, plastid | 17.01 | 23.22 |
| CDY27204 | Canola | mitochondrion, nucleus | 16.1 | 22.76 |
| CDX72127 | Canola | mitochondrion | 16.1 | 22.47 |
| CDY46577 | Canola | nucleus | 14.74 | 22.34 |
| CDY56081 | Canola | nucleus | 12.02 | 22.18 |
| CDX81263 | Canola | cytosol, peroxisome, plastid | 14.51 | 22.07 |
| CDY20473 | Canola | nucleus, plastid | 16.55 | 21.86 |
| CDY26096 | Canola | nucleus | 14.51 | 21.77 |
| CDY18690 | Canola | cytosol, peroxisome, plastid | 14.74 | 21.74 |
| GSMUA_Achr11P... | Banana | cytosol | 35.37 | 21.52 |
| CDY50031 | Canola | cytosol | 14.06 | 21.38 |
| CDX94901 | Canola | cytosol | 15.19 | 21.34 |
| CDY32791 | Canola | nucleus | 17.01 | 21.31 |
| CDY56080 | Canola | cytosol | 13.61 | 21.13 |
| CDX92768 | Canola | nucleus | 14.74 | 21.04 |
| CDX74839 | Canola | cytosol, plastid | 15.42 | 20.99 |
| CDY10554 | Canola | cytosol | 14.51 | 20.98 |
| CDY42507 | Canola | cytosol | 16.1 | 20.94 |
| CDY61251 | Canola | cytosol | 17.01 | 20.78 |
| CDX88709 | Canola | cytosol, plastid | 18.14 | 20.3 |
| CDY08249 | Canola | cytosol | 15.42 | 20.3 |
| CDX80258 | Canola | plastid | 16.33 | 20.28 |
| CDY24951 | Canola | nucleus | 17.23 | 20.27 |
| CDY42740 | Canola | nucleus | 14.74 | 20.19 |
| CDX92770 | Canola | nucleus | 14.74 | 20.06 |
| CDY07641 | Canola | nucleus | 17.01 | 20.05 |
| CDY53450 | Canola | cytosol | 14.51 | 19.88 |
| CDX74533 | Canola | cytosol | 13.15 | 19.86 |
| CDY56022 | Canola | nucleus | 14.06 | 19.81 |
| CDX99105 | Canola | cytosol, plastid | 14.51 | 19.75 |
| CDX78323 | Canola | cytosol | 12.7 | 19.44 |
| CDY28208 | Canola | cytosol | 9.98 | 18.97 |
| CDY69134 | Canola | cytosol | 12.47 | 18.9 |
| CDY48679 | Canola | cytosol, plastid | 14.29 | 18.86 |
| CDY33046 | Canola | plastid | 14.51 | 18.71 |
| CDY43991 | Canola | nucleus | 12.93 | 18.45 |
| CDY01669 | Canola | plastid | 13.38 | 18.27 |
| CDX94342 | Canola | mitochondrion, nucleus | 15.42 | 17.57 |
| CDX89343 | Canola | cytosol, mitochondrion | 13.83 | 17.33 |
| CDX69973 | Canola | cytosol | 13.83 | 16.94 |
| CDY21513 | Canola | cytosol | 13.61 | 16.85 |
| CDY34722 | Canola | cytosol | 14.06 | 15.9 |
| CDY34721 | Canola | cytosol | 13.83 | 15.64 |
| CDX85531 | Canola | cytosol | 12.02 | 15.45 |
| CDX90972 | Canola | cytosol | 11.56 | 15.22 |
| CDX69496 | Canola | cytosol | 9.75 | 14.93 |
| CDY02194 | Canola | peroxisome | 13.38 | 14.82 |
| CDY51628 | Canola | peroxisome | 13.38 | 14.53 |
| CDY26465 | Canola | cytosol | 10.43 | 13.57 |
| CDY11934 | Canola | nucleus | 16.33 | 11.04 |
| CDY23599 | Canola | golgi, mitochondrion | 12.7 | 9.2 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078J4I7 | UniProt:A0A078J4I7 | EnsemblPlants:CDY58938 | ProteinID:CDY58938 |
| ProteinID:CDY58938.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00025339001 | InterPro:IPR001841 |
| InterPro:IPR013083 | PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR44679 | SMART:SM00184 | SUPFAM:SSF57850 |
| TMHMM:TMhelix | UniParc:UPI0004EE6926 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
BnaAnng15570DBnaAnng15570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4I7]
Coordinates
chrLK033713:-:4073..5623
Molecular Weight (calculated)
49772.4 Da
IEP (calculated)
4.709
GRAVY (calculated)
-0.732
Length
441 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSRDDVTNP TPSPSCNLCG RLIPQSSTTV PDDLEIFSLC GDCKFLLLQD FGTTPPPPPL TRRQTSRRRR MRMRRRRSSS SRQGSSSESV ADQPQQFTHL
101: LSIARQSETS SHTTPNGSAR WRVLSESESE DLDNLSNASF SLYRFSSLGG ESDAASTDIE FDTDIDPMHA GLNQWNSDDE DREWEEEEGA RHSRTPSESN
201: SSVTRFDSLD LERTFRQRII ERRQALSRNI FTGLEDLEFS RYPGNVADYL DERGFEELLE QLADSDNSRR GAPPASLSCV RSLPRVIIRE EGLDCAVCKE
301: VFSLGNETTQ LPCLHLYHPH CIVPWLGARN SCPLCRYELP TDDKDYEDRK QNVVDVVSED SSSDDDGTEG GEEEDHDVVR GEGEAGVRSV SRGRWLFLAA
401: APVVSLVGVV LAMWLSNPQR RNIVFSHSQR GNRSRRWLPF F
101: LSIARQSETS SHTTPNGSAR WRVLSESESE DLDNLSNASF SLYRFSSLGG ESDAASTDIE FDTDIDPMHA GLNQWNSDDE DREWEEEEGA RHSRTPSESN
201: SSVTRFDSLD LERTFRQRII ERRQALSRNI FTGLEDLEFS RYPGNVADYL DERGFEELLE QLADSDNSRR GAPPASLSCV RSLPRVIIRE EGLDCAVCKE
301: VFSLGNETTQ LPCLHLYHPH CIVPWLGARN SCPLCRYELP TDDKDYEDRK QNVVDVVSED SSSDDDGTEG GEEEDHDVVR GEGEAGVRSV SRGRWLFLAA
401: APVVSLVGVV LAMWLSNPQR RNIVFSHSQR GNRSRRWLPF F
001: MESQGPSNGH PMDISSNSIP SSACNLCGRV VQSASDDLEI FSLCVDCKFL LLEDFGTPAP PLARRQTIRR RRMRRRRRTT RHDSSESVGV GDLSSQQFTH
101: LISIARQSLS TVQASEDLRD DLRTSSHTTP SGSTRWRLFS ESESDDFDNF GETESNASFS LYRFPHADND TISFSAYGGE SDASTDRHAD IFVQPDDRSD
201: IDFDTDIDPM RAGLNQWNSD EEDREWEEGA GPSGVAGTRY RNYLASPSES YSSMTRFDSP ELERSFRQRI IERRHSLSRN IFTGLEDLDF SPYAANVGDY
301: LDERGFDELL EQLAESDNSR RGAPPASVSC VRNLPRVIIA EEHVMKGLVC AICKELFSLR NETTQLPCLH LYHAHCIVPW LSARNSCPLC RYELPTDDKD
401: YEEGKRNVLD VSEDSSSSDD GTESGEEEYV ERGESESGVS RVSRGRWLFL AAAPVVSLVG VVLAMWLSSP HRRGIAISHS QRENRTRRWL PFF
101: LISIARQSLS TVQASEDLRD DLRTSSHTTP SGSTRWRLFS ESESDDFDNF GETESNASFS LYRFPHADND TISFSAYGGE SDASTDRHAD IFVQPDDRSD
201: IDFDTDIDPM RAGLNQWNSD EEDREWEEGA GPSGVAGTRY RNYLASPSES YSSMTRFDSP ELERSFRQRI IERRHSLSRN IFTGLEDLDF SPYAANVGDY
301: LDERGFDELL EQLAESDNSR RGAPPASVSC VRNLPRVIIA EEHVMKGLVC AICKELFSLR NETTQLPCLH LYHAHCIVPW LSARNSCPLC RYELPTDDKD
401: YEEGKRNVLD VSEDSSSSDD GTESGEEEYV ERGESESGVS RVSRGRWLFL AAAPVVSLVG VVLAMWLSSP HRRGIAISHS QRENRTRRWL PFF
Arabidopsis Description
At5g01980 [Source:UniProtKB/TrEMBL;Acc:Q9LZN3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.