Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008671.1-P | Field mustard | nucleus | 97.92 | 98.26 |
| CDY26465 | Canola | cytosol | 73.96 | 62.83 |
| CDX90972 | Canola | cytosol | 34.03 | 29.25 |
| Os06t0633500-01 | Rice | cytosol, nucleus | 12.15 | 28.23 |
| CDX85531 | Canola | cytosol | 33.33 | 27.99 |
| AT5G15820.1 | Thale cress | cytosol | 32.99 | 27.3 |
| CDY34721 | Canola | cytosol | 29.17 | 21.54 |
| KRH18313 | Soybean | nucleus | 27.78 | 21.39 |
| CDY34722 | Canola | cytosol | 28.82 | 21.28 |
| CDX78323 | Canola | cytosol | 21.18 | 21.18 |
| KRG93748 | Soybean | nucleus, plastid | 27.43 | 20.79 |
| CDY02194 | Canola | peroxisome | 28.12 | 20.35 |
| CDY69134 | Canola | cytosol | 20.49 | 20.27 |
| CDY51628 | Canola | peroxisome | 28.12 | 19.95 |
| Solyc02g089410.2.1 | Tomato | nucleus | 21.53 | 18.96 |
| CDY36069 | Canola | cytosol | 14.24 | 18.89 |
| PGSC0003DMT400003515 | Potato | nucleus | 23.61 | 18.33 |
| CDX82271 | Canola | cytosol | 13.54 | 18.31 |
| CDY72364 | Canola | cytosol | 13.89 | 18.02 |
| VIT_14s0083g00710.t01 | Wine grape | nucleus | 24.31 | 17.9 |
| Solyc02g065650.1.1 | Tomato | cytosol, nucleus, plastid | 24.65 | 17.88 |
| CDX69973 | Canola | cytosol | 21.88 | 17.5 |
| CDX75998 | Canola | nucleus | 11.46 | 17.19 |
| CDY21513 | Canola | cytosol | 21.18 | 17.13 |
| PGSC0003DMT400068309 | Potato | cytosol | 23.26 | 16.83 |
| TraesCS7D01G246300.1 | Wheat | plastid | 15.62 | 16.73 |
| TraesCS6A01G288800.1 | Wheat | cytosol, plastid | 17.71 | 16.61 |
| CDY32333 | Canola | cytosol | 13.54 | 16.6 |
| CDY68603 | Canola | cytosol | 13.89 | 16.53 |
| Os02t0727700-01 | Rice | cytosol, nucleus, plastid | 17.71 | 16.4 |
| TraesCS7B01G144100.1 | Wheat | plastid | 15.28 | 16.36 |
| TraesCS6B01G318600.1 | Wheat | cytosol, plastid | 17.36 | 16.29 |
| Os08t0487500-01 | Rice | plastid | 15.28 | 16.24 |
| CDX94665 | Canola | nucleus | 13.19 | 16.17 |
| TraesCS7A01G247700.1 | Wheat | cytosol, plastid | 14.93 | 15.99 |
| OQU85475 | Sorghum | cytosol | 17.71 | 15.94 |
| GSMUA_Achr8P24510_001 | Banana | cytosol | 21.88 | 15.91 |
| CDY22790 | Canola | nucleus | 14.58 | 15.56 |
| TraesCS6D01G160300.1 | Wheat | nucleus | 18.75 | 15.52 |
| CDX81263 | Canola | cytosol, peroxisome, plastid | 15.28 | 15.17 |
| Zm00001d053704_P001 | Maize | cytosol | 18.75 | 15.17 |
| Zm00001d051736_P001 | Maize | cytosol | 17.36 | 15.15 |
| HORVU6Hr1G034800.1 | Barley | cytosol, nucleus | 19.1 | 14.86 |
| CDY18690 | Canola | cytosol, peroxisome, plastid | 15.28 | 14.72 |
| Zm00001d031273_P001 | Maize | cytosol, plastid | 14.58 | 14.53 |
| CDY46577 | Canola | nucleus | 14.58 | 14.43 |
| HORVU6Hr1G072430.1 | Barley | cytosol | 18.06 | 14.29 |
| OQU84547 | Sorghum | cytoskeleton, cytosol, nucleus | 19.1 | 14.21 |
| Zm00001d046663_P001 | Maize | cytosol | 14.58 | 14.09 |
| CDX74533 | Canola | cytosol | 14.24 | 14.04 |
| EES14331 | Sorghum | plastid | 14.24 | 13.99 |
| CDY43991 | Canola | nucleus | 14.93 | 13.92 |
| CDY10554 | Canola | cytosol | 14.58 | 13.77 |
| CDY56022 | Canola | nucleus | 14.93 | 13.74 |
| EER90075 | Sorghum | nucleus | 14.24 | 13.53 |
| TraesCS7D01G387300.1 | Wheat | cytosol | 15.28 | 13.5 |
| TraesCS6B01G198800.1 | Wheat | nucleus | 18.75 | 13.47 |
| CDY27204 | Canola | mitochondrion, nucleus | 14.58 | 13.46 |
| CDY56080 | Canola | cytosol | 13.19 | 13.38 |
| CDY01221 | Canola | cytosol | 10.07 | 13.3 |
| CDX72127 | Canola | mitochondrion | 14.58 | 13.29 |
| CDY26096 | Canola | nucleus | 13.54 | 13.27 |
| TraesCS7B01G293600.1 | Wheat | cytosol | 14.93 | 13.03 |
| GSMUA_Achr3P06300_001 | Banana | cytosol | 23.61 | 13.03 |
| CDY01669 | Canola | plastid | 14.58 | 13.0 |
| TraesCS7A01G391700.1 | Wheat | cytosol | 14.93 | 12.99 |
| CDY56081 | Canola | nucleus | 10.76 | 12.97 |
| CDY33437 | Canola | cytosol | 14.58 | 12.96 |
| CDY22483 | Canola | mitochondrion | 13.54 | 12.87 |
| CDY23878 | Canola | mitochondrion, nucleus | 13.54 | 12.79 |
| CDY42507 | Canola | cytosol | 14.93 | 12.68 |
| CDY32791 | Canola | nucleus | 15.28 | 12.5 |
| CDY24592 | Canola | nucleus | 13.89 | 12.46 |
| CDX79968 | Canola | mitochondrion, nucleus | 12.85 | 12.46 |
| CDX94901 | Canola | cytosol | 13.54 | 12.42 |
| CDY50031 | Canola | cytosol | 12.5 | 12.41 |
| CDY25360 | Canola | cytosol, nucleus, plastid | 13.89 | 12.38 |
| CDX99105 | Canola | cytosol, plastid | 13.89 | 12.35 |
| CDY35437 | Canola | mitochondrion, nucleus | 13.54 | 12.3 |
| CDX92770 | Canola | nucleus | 13.54 | 12.04 |
| CDX92768 | Canola | nucleus | 12.85 | 11.97 |
| CDY42740 | Canola | nucleus | 13.19 | 11.8 |
| CDY53450 | Canola | cytosol | 13.19 | 11.8 |
| CDY08249 | Canola | cytosol | 13.54 | 11.64 |
| CDY28208 | Canola | cytosol | 9.38 | 11.64 |
| HORVU7Hr1G092570.1 | Barley | cytosol | 15.28 | 11.49 |
| CDX89343 | Canola | cytosol, mitochondrion | 13.89 | 11.36 |
| CDY61251 | Canola | cytosol | 13.89 | 11.08 |
| CDY20473 | Canola | nucleus, plastid | 12.85 | 11.08 |
| CDX80258 | Canola | plastid | 13.54 | 10.99 |
| Os02t0191500-01 | Rice | nucleus | 14.24 | 10.93 |
| CDY33046 | Canola | plastid | 12.85 | 10.82 |
| CDY48679 | Canola | cytosol, plastid | 12.5 | 10.78 |
| CDX74839 | Canola | cytosol, plastid | 11.81 | 10.49 |
| CDY07641 | Canola | nucleus | 13.54 | 10.43 |
| CDX88709 | Canola | cytosol, plastid | 13.89 | 10.15 |
| CDY24951 | Canola | nucleus | 13.19 | 10.13 |
| CDX94342 | Canola | mitochondrion, nucleus | 13.54 | 10.08 |
| CDY03622 | Canola | nucleus | 15.28 | 9.87 |
| CDY58938 | Canola | nucleus | 14.93 | 9.75 |
| CDY23599 | Canola | golgi, mitochondrion | 14.93 | 7.06 |
| CDY11934 | Canola | nucleus | 13.89 | 6.13 |
Protein Annotations
| EnsemblPlants:CDX69496 | EnsemblPlantsGene:GSBRNA2T00135490001 | Gene3D:3.30.40.10 | GO:A0A078BXH6 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR44679 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDX69496 | ProteinID:CDX69496.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EE234D |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA10g18450D
Coordinates
chrLK031790:-:502775..503641
Molecular Weight (calculated)
31770.5 Da
IEP (calculated)
3.751
GRAVY (calculated)
-0.454
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKLFGFPIN VEEDGGRGGS STNADASRSA AQPDGDAMNS SAGFSESGPA PMDSESDLRS SFIDFFGRES REMQRVSRGV DISGGFDAAM EEDVEIELTL
101: GIGAGSVTGD KETDSGRVEV GTDLIEEEEE EEESEEEEEE EYSVPVNNDA LVEDFNVHEE SLEDFMMNVY EDSSIMDMTE EELLDILPGL GGEYHGDYFD
201: DIFETPPVMA TRAASKRVVD ELPVVEINSE ELRNGKIACA ICMGDFVVKE KVTRLPCWHY YHGECIVPWL EMKNTCPVCR FALPTDDL
101: GIGAGSVTGD KETDSGRVEV GTDLIEEEEE EEESEEEEEE EYSVPVNNDA LVEDFNVHEE SLEDFMMNVY EDSSIMDMTE EELLDILPGL GGEYHGDYFD
201: DIFETPPVMA TRAASKRVVD ELPVVEINSE ELRNGKIACA ICMGDFVVKE KVTRLPCWHY YHGECIVPWL EMKNTCPVCR FALPTDDL
001: MSSAKLFGCS INVNVEAEEE EGGDGGSSTN VEVSRSGNQP DCEAMSFSNQ MEIGVRNTYY QFLESNSDSG SDSMYAEPEF IDFFDRESYE VDTVREVCVS
101: SNQRVSTPGY FNIWDQDVDL GLGIGLGSRS GSGQLPGDSG GVGVEVGRGV TPVEYNLFGE EAMVVDEVLE WENFNNAIHL VQEPAYASME GEEEEEEDEV
201: VMEFAASIYS DAWEILLYDN MTNSAPMDLD VEVWLDSVDG YAPMDYNAII GQMFDNETGI KGTPPASKSV VDGLPDVELT IEELSSVSIV CAICKDEVVF
301: KEKVKRLPCK HYYHGECIIP WLGIRNTCPV CRHELPTDDL EYERKRRA
101: SNQRVSTPGY FNIWDQDVDL GLGIGLGSRS GSGQLPGDSG GVGVEVGRGV TPVEYNLFGE EAMVVDEVLE WENFNNAIHL VQEPAYASME GEEEEEEDEV
201: VMEFAASIYS DAWEILLYDN MTNSAPMDLD VEVWLDSVDG YAPMDYNAII GQMFDNETGI KGTPPASKSV VDGLPDVELT IEELSSVSIV CAICKDEVVF
301: KEKVKRLPCK HYYHGECIIP WLGIRNTCPV CRHELPTDDL EYERKRRA
Arabidopsis Description
AT5g15820/F14F8_200 [Source:UniProtKB/TrEMBL;Acc:Q9LFU4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.