Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G387300.1 | Wheat | cytosol | 80.16 | 94.17 |
| TraesCS7A01G391700.1 | Wheat | cytosol | 79.9 | 92.45 |
| TraesCS7B01G293600.1 | Wheat | cytosol | 78.59 | 91.21 |
| Os06t0633500-01 | Rice | cytosol, nucleus | 24.8 | 76.61 |
| EER90075 | Sorghum | nucleus | 54.57 | 68.98 |
| Zm00001d046663_P001 | Maize | cytosol | 52.48 | 67.45 |
| HORVU7Hr1G000850.1 | Barley | cytosol, mitochondrion, nucleus | 20.89 | 22.41 |
| HORVU3Hr1G096110.1 | Barley | mitochondrion | 15.14 | 20.07 |
| HORVU1Hr1G043220.1 | Barley | cytosol, mitochondrion, plastid, vacuole | 19.06 | 19.89 |
| HORVU6Hr1G072430.1 | Barley | cytosol | 18.8 | 19.78 |
| Solyc02g089410.2.1 | Tomato | nucleus | 14.88 | 17.43 |
| KRH56750 | Soybean | cytosol | 15.4 | 17.25 |
| AT5G15820.1 | Thale cress | cytosol | 15.67 | 17.24 |
| CDY34722 | Canola | cytosol | 17.23 | 16.92 |
| HORVU4Hr1G060130.1 | Barley | cytosol | 15.4 | 16.76 |
| HORVU7Hr1G055010.1 | Barley | cytosol | 9.66 | 16.74 |
| CDY34721 | Canola | cytosol | 16.97 | 16.67 |
| KRG93748 | Soybean | nucleus, plastid | 16.45 | 16.58 |
| CDY69134 | Canola | cytosol | 12.53 | 16.49 |
| PGSC0003DMT400003515 | Potato | nucleus | 15.93 | 16.44 |
| KRH03189 | Soybean | nucleus | 15.14 | 16.34 |
| CDX78323 | Canola | cytosol | 12.27 | 16.32 |
| KRH18313 | Soybean | nucleus | 15.93 | 16.31 |
| CDY26465 | Canola | cytosol | 14.36 | 16.22 |
| HORVU6Hr1G034800.1 | Barley | cytosol, nucleus | 15.67 | 16.22 |
| Bra005970.1-P | Field mustard | cytosol | 12.27 | 16.21 |
| CDX90972 | Canola | cytosol | 14.1 | 16.12 |
| CDX85531 | Canola | cytosol | 14.36 | 16.04 |
| Bra021467.1-P | Field mustard | nucleus | 16.19 | 15.9 |
| Bra008671.1-P | Field mustard | nucleus | 11.75 | 15.68 |
| GSMUA_Achr8P24510_001 | Banana | cytosol | 16.19 | 15.66 |
| AT3G02340.2 | Thale cress | cytosol | 16.71 | 15.65 |
| HORVU6Hr1G080320.2 | Barley | cytosol, mitochondrion | 13.58 | 15.62 |
| VIT_14s0083g00710.t01 | Wine grape | nucleus | 15.93 | 15.6 |
| HORVU3Hr1G115000.7 | Barley | mitochondrion | 15.67 | 15.31 |
| CDX69496 | Canola | cytosol | 11.49 | 15.28 |
| HORVU0Hr1G019650.1 | Barley | mitochondrion | 12.53 | 15.14 |
| HORVU3Hr1G041030.1 | Barley | mitochondrion | 15.14 | 14.99 |
| HORVU1Hr1G004330.14 | Barley | cytosol | 15.67 | 14.96 |
| AT5G08139.1 | Thale cress | cytosol | 14.62 | 14.89 |
| PGSC0003DMT400063293 | Potato | nucleus | 16.71 | 14.81 |
| HORVU1Hr1G068950.2 | Barley | golgi | 14.88 | 14.77 |
| Bra023539.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 15.14 | 14.61 |
| Solyc02g065650.1.1 | Tomato | cytosol, nucleus, plastid | 15.14 | 14.61 |
| PGSC0003DMT400068309 | Potato | cytosol | 15.14 | 14.57 |
| HORVU4Hr1G051610.2 | Barley | cytosol | 13.05 | 14.49 |
| VIT_17s0000g04730.t01 | Wine grape | nucleus | 16.45 | 14.35 |
| HORVU3Hr1G039220.1 | Barley | cytosol | 13.58 | 13.79 |
| CDY21513 | Canola | cytosol | 12.79 | 13.76 |
| CDX69973 | Canola | cytosol | 12.79 | 13.61 |
| Solyc03g114680.2.1 | Tomato | nucleus | 16.97 | 13.05 |
| Bra009323.1-P | Field mustard | cytosol | 12.79 | 12.93 |
| CDY51628 | Canola | peroxisome | 13.05 | 12.32 |
| CDY02194 | Canola | peroxisome | 12.79 | 12.31 |
| HORVU5Hr1G111530.1 | Barley | nucleus | 12.53 | 12.06 |
| GSMUA_Achr3P06300_001 | Banana | cytosol | 16.19 | 11.88 |
| Bra013006.1-P | Field mustard | nucleus | 12.79 | 11.75 |
| AT5G60820.1 | Thale cress | cytosol | 12.79 | 11.69 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G092570.1 | EnsemblPlantsGene:HORVU7Hr1G092570 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR44679 | PFAM:PF13639 | PFscan:PS50089 | SEG:seg | SMART:SM00184 |
| SUPFAM:SSF57850 | UniParc:UPI000B4787E4 | UniProt:A0A287XC88 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr7H:+:567022987..567025116
Molecular Weight (calculated)
40990.8 Da
IEP (calculated)
3.868
GRAVY (calculated)
-0.453
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: RTDGVGEWPS QFAHQPETET PRLHTTTTEP DHPTPPHPTT PQFPSLPFPS SAAMAGLADE FFLGIDEDGP GSLGEPGYLS FSDTFEEEHH FTHSDISPDF
101: DIESQTLTPD PGSPFSFDSD HDLDLSLGLG RLSPSFLRMR SLSPARSPPF WDCLEEDLAN DLEEDLTNGL EWEEIADDAD AEAGDASVPG GGGGGGTAGG
201: GGDADADVFG FLSEREILGV MEGIDSGEDE SMFSDEPPFD FGDEGRDLDD IFRSVGWEVL PVPLDDDEFE VLPGHMADVT VGGAPPAARA VVERLQVVAI
301: SGKEAAQGCA VCKDGIVQGE LATRLPCAHV YHGACIGPWL AIRNSCPVCR YELPTDDPDY EQRRARRRSA GGSTAQLGTP MQM
101: DIESQTLTPD PGSPFSFDSD HDLDLSLGLG RLSPSFLRMR SLSPARSPPF WDCLEEDLAN DLEEDLTNGL EWEEIADDAD AEAGDASVPG GGGGGGTAGG
201: GGDADADVFG FLSEREILGV MEGIDSGEDE SMFSDEPPFD FGDEGRDLDD IFRSVGWEVL PVPLDDDEFE VLPGHMADVT VGGAPPAARA VVERLQVVAI
301: SGKEAAQGCA VCKDGIVQGE LATRLPCAHV YHGACIGPWL AIRNSCPVCR YELPTDDPDY EQRRARRRSA GGSTAQLGTP MQM
001: MDDLLHQRVE QSQVTPPHDD SNIHGDFDNE ATDESRSETC SVVIEGNCDM VIELGLESGS VIVENLGDSD IDVSNDFDEP DDDDFFVGRT DFGLEFRDIA
101: SSGNDIRLIT VESGSDDDDG VENERELWGI DLNEEDVYVN DDDEYEDDDV SVTIPLCWDS LQLEDREVTA DEFDWEEVGG GGGGGVDDER EIRSGFAQID
201: MNDESLISAS PIISLEGLVT RERAEGSGNL GWEVLLNHTL EINFDVDNRE LYIGGDHDDY VQDYDMLFEQ FADAEVSVIG LPPTSKSFLN NLPVVLLEGE
301: NDDDGGLVCA VCKDEMNIGN KAVQLPCNHK YHSECIVPWL KVRNTCPVCR YELPTDDAEY EQRKTQRTTN TFGMVL
101: SSGNDIRLIT VESGSDDDDG VENERELWGI DLNEEDVYVN DDDEYEDDDV SVTIPLCWDS LQLEDREVTA DEFDWEEVGG GGGGGVDDER EIRSGFAQID
201: MNDESLISAS PIISLEGLVT RERAEGSGNL GWEVLLNHTL EINFDVDNRE LYIGGDHDDY VQDYDMLFEQ FADAEVSVIG LPPTSKSFLN NLPVVLLEGE
301: NDDDGGLVCA VCKDEMNIGN KAVQLPCNHK YHSECIVPWL KVRNTCPVCR YELPTDDAEY EQRKTQRTTN TFGMVL
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GYG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.