Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023539.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 95.34 | 82.37 |
| CDX90972 | Canola | cytosol | 76.38 | 78.21 |
| AT5G15820.1 | Thale cress | cytosol | 46.94 | 46.26 |
| Os06t0633500-01 | Rice | cytosol, nucleus | 14.58 | 40.32 |
| CDX69496 | Canola | cytosol | 27.99 | 33.33 |
| CDY34722 | Canola | cytosol | 37.32 | 32.82 |
| CDY26465 | Canola | cytosol | 32.07 | 32.45 |
| CDY34721 | Canola | cytosol | 36.73 | 32.31 |
| CDX82271 | Canola | cytosol | 15.16 | 24.41 |
| CDY36069 | Canola | cytosol | 15.16 | 23.96 |
| VIT_14s0083g00710.t01 | Wine grape | nucleus | 25.95 | 22.76 |
| CDY72364 | Canola | cytosol | 14.58 | 22.52 |
| KRH18313 | Soybean | nucleus | 24.2 | 22.19 |
| CDX75998 | Canola | nucleus | 11.95 | 21.35 |
| KRG93748 | Soybean | nucleus, plastid | 23.32 | 21.05 |
| CDY69134 | Canola | cytosol | 17.49 | 20.62 |
| PGSC0003DMT400068309 | Potato | cytosol | 23.91 | 20.6 |
| Solyc02g089410.2.1 | Tomato | nucleus | 19.53 | 20.49 |
| CDX78323 | Canola | cytosol | 17.2 | 20.49 |
| PGSC0003DMT400003515 | Potato | nucleus | 22.16 | 20.49 |
| Solyc02g065650.1.1 | Tomato | cytosol, nucleus, plastid | 23.62 | 20.4 |
| CDY32333 | Canola | cytosol | 13.7 | 20.0 |
| CDY68603 | Canola | cytosol | 13.99 | 19.83 |
| CDX94665 | Canola | nucleus | 13.41 | 19.57 |
| CDY22790 | Canola | nucleus | 15.16 | 19.26 |
| EER90075 | Sorghum | nucleus | 16.62 | 18.81 |
| Zm00001d046663_P001 | Maize | cytosol | 16.33 | 18.79 |
| GSMUA_Achr8P24510_001 | Banana | cytosol | 21.28 | 18.43 |
| CDX81263 | Canola | cytosol, peroxisome, plastid | 15.45 | 18.28 |
| CDX69973 | Canola | cytosol | 18.37 | 17.5 |
| CDY18690 | Canola | cytosol, peroxisome, plastid | 15.16 | 17.39 |
| Os08t0487500-01 | Rice | plastid | 13.7 | 17.34 |
| Zm00001d051736_P001 | Maize | cytosol | 16.62 | 17.27 |
| TraesCS7D01G387300.1 | Wheat | cytosol | 16.33 | 17.18 |
| CDY21513 | Canola | cytosol | 17.78 | 17.13 |
| Os02t0727700-01 | Rice | cytosol, nucleus, plastid | 15.45 | 17.04 |
| TraesCS6B01G318600.1 | Wheat | cytosol, plastid | 15.16 | 16.94 |
| CDY51628 | Canola | peroxisome | 19.83 | 16.75 |
| TraesCS7B01G293600.1 | Wheat | cytosol | 16.04 | 16.67 |
| TraesCS7A01G391700.1 | Wheat | cytosol | 16.04 | 16.62 |
| TraesCS6A01G288800.1 | Wheat | cytosol, plastid | 14.87 | 16.61 |
| Zm00001d031273_P001 | Maize | cytosol, plastid | 13.99 | 16.61 |
| CDY02194 | Canola | peroxisome | 19.24 | 16.58 |
| OQU85475 | Sorghum | cytosol | 15.45 | 16.56 |
| TraesCS7D01G246300.1 | Wheat | plastid | 12.83 | 16.36 |
| CDY42507 | Canola | cytosol | 15.74 | 15.93 |
| GSMUA_Achr3P06300_001 | Banana | cytosol | 24.2 | 15.9 |
| CDY24592 | Canola | nucleus | 14.87 | 15.89 |
| CDY25360 | Canola | cytosol, nucleus, plastid | 14.87 | 15.79 |
| CDY33437 | Canola | cytosol | 14.87 | 15.74 |
| Zm00001d053704_P001 | Maize | cytosol | 16.33 | 15.73 |
| CDY27204 | Canola | mitochondrion, nucleus | 14.29 | 15.71 |
| EES14331 | Sorghum | plastid | 13.41 | 15.7 |
| TraesCS7A01G247700.1 | Wheat | cytosol, plastid | 12.24 | 15.61 |
| TraesCS7B01G144100.1 | Wheat | plastid | 12.24 | 15.61 |
| CDX72127 | Canola | mitochondrion | 14.29 | 15.51 |
| CDX94901 | Canola | cytosol | 13.99 | 15.29 |
| CDX74533 | Canola | cytosol | 12.54 | 14.73 |
| CDY01221 | Canola | cytosol | 9.33 | 14.68 |
| CDY22483 | Canola | mitochondrion | 12.83 | 14.52 |
| CDX99105 | Canola | cytosol, plastid | 13.7 | 14.51 |
| OQU84547 | Sorghum | cytoskeleton, cytosol, nucleus | 16.33 | 14.47 |
| CDY23878 | Canola | mitochondrion, nucleus | 12.83 | 14.43 |
| HORVU7Hr1G092570.1 | Barley | cytosol | 16.04 | 14.36 |
| HORVU6Hr1G072430.1 | Barley | cytosol | 15.16 | 14.29 |
| CDY46577 | Canola | nucleus | 11.95 | 14.09 |
| CDY53450 | Canola | cytosol | 13.12 | 13.98 |
| CDY01669 | Canola | plastid | 13.12 | 13.93 |
| CDX92768 | Canola | nucleus | 12.54 | 13.92 |
| CDY35437 | Canola | mitochondrion, nucleus | 12.83 | 13.88 |
| CDX79968 | Canola | mitochondrion, nucleus | 11.95 | 13.8 |
| CDY28208 | Canola | cytosol | 9.33 | 13.79 |
| CDX92770 | Canola | nucleus | 12.54 | 13.27 |
| TraesCS6D01G160300.1 | Wheat | nucleus | 13.41 | 13.22 |
| CDY48679 | Canola | cytosol, plastid | 12.83 | 13.17 |
| CDY33046 | Canola | plastid | 13.12 | 13.16 |
| CDY42740 | Canola | nucleus | 12.24 | 13.04 |
| CDY43991 | Canola | nucleus | 11.66 | 12.95 |
| HORVU6Hr1G034800.1 | Barley | cytosol, nucleus | 13.7 | 12.7 |
| CDX80258 | Canola | plastid | 13.12 | 12.68 |
| CDY56080 | Canola | cytosol | 10.5 | 12.68 |
| CDY26096 | Canola | nucleus | 10.79 | 12.59 |
| CDY20473 | Canola | nucleus, plastid | 12.24 | 12.57 |
| CDY56081 | Canola | nucleus | 8.75 | 12.55 |
| CDY32791 | Canola | nucleus | 12.83 | 12.5 |
| CDY61251 | Canola | cytosol | 13.12 | 12.47 |
| CDX74839 | Canola | cytosol, plastid | 11.66 | 12.35 |
| CDX89343 | Canola | cytosol, mitochondrion | 12.54 | 12.22 |
| CDY50031 | Canola | cytosol | 10.2 | 12.07 |
| CDY58938 | Canola | nucleus | 15.45 | 12.02 |
| CDX88709 | Canola | cytosol, plastid | 13.7 | 11.93 |
| CDY03622 | Canola | nucleus | 15.45 | 11.88 |
| Os02t0191500-01 | Rice | nucleus | 12.83 | 11.73 |
| TraesCS6B01G198800.1 | Wheat | nucleus | 13.7 | 11.72 |
| CDY56022 | Canola | nucleus | 10.5 | 11.5 |
| CDY10554 | Canola | cytosol | 10.2 | 11.48 |
| CDY24951 | Canola | nucleus | 12.54 | 11.47 |
| CDY07641 | Canola | nucleus | 12.24 | 11.23 |
| CDX94342 | Canola | mitochondrion, nucleus | 12.54 | 11.11 |
| CDY08249 | Canola | cytosol | 10.79 | 11.04 |
| CDY11934 | Canola | nucleus | 13.7 | 7.21 |
| CDY23599 | Canola | golgi, mitochondrion | 11.66 | 6.57 |
Protein Annotations
| EnsemblPlants:CDX85531 | EnsemblPlantsGene:GSBRNA2T00143243001 | Gene3D:3.30.40.10 | GO:A0A078D8H0 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR44679 | PFAM:PF13639 | PFscan:PS50089 | ProteinID:CDX85531 |
| ProteinID:CDX85531.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EEC729 | MapMan:35.1 |
Description
BnaA02g02820D
Coordinates
chrLK031842:-:517129..518357
Molecular Weight (calculated)
38768.8 Da
IEP (calculated)
4.155
GRAVY (calculated)
-0.588
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKLFGCPIN VKAEEEDDDG GSSIAAEFYR SGNQPDYEAI RETNPYIRFL ESISDPGSVS MESEPDRHHS FIDFFGRESY VGSNQRLSTS RAFDIWDIQD
101: MEEEEEVELG LRIGSGSGSD HSGELGLQVT RSFEIDTRML EIDSGRVEIG SSRVEIGSGR VEIGSGRVEV DTGRVEVDTG LVEIGTEPME EYNQEWHGGL
201: FDGFFEESVD LVMEDFFDTL FPDIDVYAAN NRDYEDVIAR TFHESGTKGS PPASKRMVDE LPDVDVTSEE LSIGCAICKD EIVVEEKVKR LPCRHYYHKE
301: CIVPWLGIRN TCPVCRYELP TDDLEYERNK RSRRGLGRDL MSE
101: MEEEEEVELG LRIGSGSGSD HSGELGLQVT RSFEIDTRML EIDSGRVEIG SSRVEIGSGR VEIGSGRVEV DTGRVEVDTG LVEIGTEPME EYNQEWHGGL
201: FDGFFEESVD LVMEDFFDTL FPDIDVYAAN NRDYEDVIAR TFHESGTKGS PPASKRMVDE LPDVDVTSEE LSIGCAICKD EIVVEEKVKR LPCRHYYHKE
301: CIVPWLGIRN TCPVCRYELP TDDLEYERNK RSRRGLGRDL MSE
001: MSSAKLFGCS INVNVEAEEE EGGDGGSSTN VEVSRSGNQP DCEAMSFSNQ MEIGVRNTYY QFLESNSDSG SDSMYAEPEF IDFFDRESYE VDTVREVCVS
101: SNQRVSTPGY FNIWDQDVDL GLGIGLGSRS GSGQLPGDSG GVGVEVGRGV TPVEYNLFGE EAMVVDEVLE WENFNNAIHL VQEPAYASME GEEEEEEDEV
201: VMEFAASIYS DAWEILLYDN MTNSAPMDLD VEVWLDSVDG YAPMDYNAII GQMFDNETGI KGTPPASKSV VDGLPDVELT IEELSSVSIV CAICKDEVVF
301: KEKVKRLPCK HYYHGECIIP WLGIRNTCPV CRHELPTDDL EYERKRRA
101: SNQRVSTPGY FNIWDQDVDL GLGIGLGSRS GSGQLPGDSG GVGVEVGRGV TPVEYNLFGE EAMVVDEVLE WENFNNAIHL VQEPAYASME GEEEEEEDEV
201: VMEFAASIYS DAWEILLYDN MTNSAPMDLD VEVWLDSVDG YAPMDYNAII GQMFDNETGI KGTPPASKSV VDGLPDVELT IEELSSVSIV CAICKDEVVF
301: KEKVKRLPCK HYYHGECIIP WLGIRNTCPV CRHELPTDDL EYERKRRA
Arabidopsis Description
AT5g15820/F14F8_200 [Source:UniProtKB/TrEMBL;Acc:Q9LFU4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.