Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74839 | Canola | cytosol, plastid | 89.22 | 91.98 |
| CDY07641 | Canola | nucleus | 81.14 | 72.46 |
| CDY24951 | Canola | nucleus | 81.14 | 72.27 |
| Os03t0271600-01 | Rice | plastid | 45.51 | 54.48 |
| TraesCS4A01G095800.1 | Wheat | cytosol | 44.91 | 53.57 |
| TraesCS4B01G209100.1 | Wheat | plastid | 44.91 | 53.57 |
| TraesCS4D01G209500.1 | Wheat | plastid | 44.91 | 53.57 |
| EER95109 | Sorghum | plastid | 44.01 | 53.45 |
| Zm00001d028590_P001 | Maize | plastid | 44.31 | 53.24 |
| Zm00001d047824_P001 | Maize | plastid | 44.31 | 53.24 |
| GSMUA_Achr7P15040_001 | Banana | mitochondrion | 46.41 | 49.05 |
| GSMUA_AchrUn_... | Banana | mitochondrion, plastid | 49.1 | 46.72 |
| GSMUA_Achr10P... | Banana | mitochondrion | 46.41 | 45.99 |
| Zm00001d035677_P001 | Maize | plastid | 47.01 | 45.11 |
| Os05t0110000-01 | Rice | mitochondrion | 44.61 | 44.74 |
| GSMUA_Achr6P23590_001 | Banana | mitochondrion, nucleus | 45.51 | 44.19 |
| GSMUA_Achr5P07070_001 | Banana | nucleus | 42.81 | 43.47 |
| TraesCS3D01G532300.1 | Wheat | cytosol | 49.7 | 43.01 |
| HORVU4Hr1G060130.1 | Barley | cytosol | 44.91 | 42.61 |
| KRH15082 | Soybean | nucleus | 48.2 | 42.15 |
| KRH73053 | Soybean | nucleus | 49.1 | 41.94 |
| TraesCS3B01G595200.1 | Wheat | cytosol | 50.0 | 41.85 |
| CDY53450 | Canola | cytosol | 40.12 | 41.61 |
| GSMUA_Achr2P19140_001 | Banana | mitochondrion | 44.91 | 41.44 |
| CDX80258 | Canola | plastid | 43.71 | 41.13 |
| Os01t0972000-01 | Rice | nucleus | 41.02 | 41.02 |
| TraesCS1B01G036900.1 | Wheat | cytosol | 48.8 | 40.85 |
| TraesCS1A01G029800.1 | Wheat | cytosol | 48.5 | 40.6 |
| GSMUA_Achr10P... | Banana | mitochondrion | 48.8 | 40.55 |
| HORVU1Hr1G004330.14 | Barley | cytosol | 48.5 | 40.4 |
| TraesCS1D01G030300.1 | Wheat | nucleus | 48.5 | 40.3 |
| CDY61251 | Canola | cytosol | 43.41 | 40.17 |
| HORVU7Hr1G055010.1 | Barley | cytosol | 26.35 | 39.82 |
| EES17560 | Sorghum | plastid | 49.1 | 39.71 |
| Zm00001d011076_P001 | Maize | plastid | 45.81 | 39.53 |
| CDY48679 | Canola | cytosol, plastid | 39.22 | 39.22 |
| CDY33046 | Canola | plastid | 39.52 | 38.6 |
| CDX99105 | Canola | cytosol, plastid | 37.43 | 38.58 |
| CDX88709 | Canola | cytosol, plastid | 44.61 | 37.82 |
| HORVU3Hr1G041030.1 | Barley | mitochondrion | 43.41 | 37.47 |
| GSMUA_Achr10P... | Banana | nucleus | 31.14 | 36.88 |
| HORVU3Hr1G115000.7 | Barley | mitochondrion | 43.11 | 36.73 |
| CDY36069 | Canola | cytosol | 20.06 | 30.88 |
| CDY72364 | Canola | cytosol | 20.06 | 30.18 |
| CDX82271 | Canola | cytosol | 18.86 | 29.58 |
| CDX75998 | Canola | nucleus | 16.47 | 28.65 |
| CDY22483 | Canola | mitochondrion | 25.15 | 27.72 |
| CDY33437 | Canola | cytosol | 25.45 | 26.23 |
| CDY35437 | Canola | mitochondrion, nucleus | 24.55 | 25.87 |
| CDY24592 | Canola | nucleus | 24.85 | 25.86 |
| CDX94665 | Canola | nucleus | 17.96 | 25.53 |
| CDX74533 | Canola | cytosol | 22.16 | 25.34 |
| CDY68603 | Canola | cytosol | 18.26 | 25.21 |
| CDY32333 | Canola | cytosol | 17.66 | 25.11 |
| CDY25360 | Canola | cytosol, nucleus, plastid | 24.25 | 25.08 |
| CDY27204 | Canola | mitochondrion, nucleus | 23.35 | 25.0 |
| CDX72127 | Canola | mitochondrion | 23.35 | 24.68 |
| CDX79968 | Canola | mitochondrion, nucleus | 21.86 | 24.58 |
| CDY22790 | Canola | nucleus | 19.76 | 24.44 |
| CDY23878 | Canola | mitochondrion, nucleus | 22.16 | 24.26 |
| CDY01669 | Canola | plastid | 23.05 | 23.84 |
| CDY10554 | Canola | cytosol | 21.56 | 23.61 |
| CDX81263 | Canola | cytosol, peroxisome, plastid | 19.46 | 22.41 |
| CDY18690 | Canola | cytosol, peroxisome, plastid | 20.06 | 22.41 |
| CDY46577 | Canola | nucleus | 19.46 | 22.34 |
| CDY50031 | Canola | cytosol | 19.16 | 22.07 |
| CDX94901 | Canola | cytosol | 20.66 | 21.97 |
| CDY56080 | Canola | cytosol | 18.56 | 21.83 |
| CDY56022 | Canola | nucleus | 20.36 | 21.73 |
| CDY56081 | Canola | nucleus | 15.27 | 21.34 |
| CDY42507 | Canola | cytosol | 21.56 | 21.24 |
| CDY26096 | Canola | nucleus | 17.96 | 20.41 |
| CDX92768 | Canola | nucleus | 18.86 | 20.39 |
| CDY43991 | Canola | nucleus | 18.56 | 20.06 |
| CDY42740 | Canola | nucleus | 18.86 | 19.57 |
| CDX92770 | Canola | nucleus | 18.86 | 19.44 |
| CDY32791 | Canola | nucleus | 19.76 | 18.75 |
| CDY08249 | Canola | cytosol | 18.56 | 18.51 |
| CDY01221 | Canola | cytosol | 11.98 | 18.35 |
| CDY28208 | Canola | cytosol | 12.28 | 17.67 |
| CDX78323 | Canola | cytosol | 14.67 | 17.01 |
| CDY69134 | Canola | cytosol | 14.67 | 16.84 |
| CDY58938 | Canola | nucleus | 21.86 | 16.55 |
| CDY03622 | Canola | nucleus | 21.86 | 16.37 |
| CDX89343 | Canola | cytosol, mitochondrion | 17.07 | 16.19 |
| CDX94342 | Canola | mitochondrion, nucleus | 18.26 | 15.76 |
| CDY34721 | Canola | cytosol | 17.07 | 14.62 |
| CDY21513 | Canola | cytosol | 15.27 | 14.33 |
| CDY26465 | Canola | cytosol | 14.37 | 14.16 |
| CDY34722 | Canola | cytosol | 16.47 | 14.1 |
| CDY02194 | Canola | peroxisome | 16.77 | 14.07 |
| CDY51628 | Canola | peroxisome | 17.07 | 14.04 |
| CDX69973 | Canola | cytosol | 14.97 | 13.89 |
| CDX90972 | Canola | cytosol | 13.17 | 13.13 |
| CDX69496 | Canola | cytosol | 11.08 | 12.85 |
| CDX85531 | Canola | cytosol | 12.57 | 12.24 |
| CDY11934 | Canola | nucleus | 21.56 | 11.04 |
| CDY23599 | Canola | golgi, mitochondrion | 18.26 | 10.02 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078G786 | UniProt:A0A078G786 | EnsemblPlants:CDY20473 | ProteinID:CDY20473 |
| ProteinID:CDY20473.1 | InterPro:DUF1117 | EnsemblPlantsGene:GSBRNA2T00012566001 | InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF06547 |
| PFAM:PF13639 | PFAM:PF14369 | PFscan:PS50089 | PANTHER:PTHR44274 | PANTHER:PTHR44274:SF3 | SMART:SM00184 |
| SUPFAM:SSF57850 | UniParc:UPI0004EF4949 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
BnaC04g05710DBnaC04g05710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G786]
Coordinates
chrLK032108:-:379372..380459
Molecular Weight (calculated)
36483.6 Da
IEP (calculated)
7.058
GRAVY (calculated)
-0.522
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGSHWCYS CSRFVLISDS ISCPDCDGGF LERLHQTPDS FHRQHRSPTR FPTPPTSNRS PNPVIVLRGS NPSDRSPFQM YYDDGSDSGL RPLPPSMTEF
101: LLGSGFDRLL DQISQIELNN NSNNSRDHPP ASKSAVEALP VIQIAPTHLE SDSQSHCAVC KETFLLDSAA REMPCNHIYH PDCILPWLAI RNSCPVCRHE
201: LPAEEDDDVA AATVAARGEE EEEEAGMTIW RLPGGGFAVG RIPGGWRGGM PVVYTEVDGG RLGEERLPRR VARRGGSSGE RSGGFAGRIM RLFGCFSGSS
301: SSGSGSSSQG TRRSRSSFAL FRTASSRRRH WLAS
101: LLGSGFDRLL DQISQIELNN NSNNSRDHPP ASKSAVEALP VIQIAPTHLE SDSQSHCAVC KETFLLDSAA REMPCNHIYH PDCILPWLAI RNSCPVCRHE
201: LPAEEDDDVA AATVAARGEE EEEEAGMTIW RLPGGGFAVG RIPGGWRGGM PVVYTEVDGG RLGEERLPRR VARRGGSSGE RSGGFAGRIM RLFGCFSGSS
301: SSGSGSSSQG TRRSRSSFAL FRTASSRRRH WLAS
001: MASGSYWCYS CSRFVWVSDS ISCPDCDGGF LELIQEPLDF TPSDSFTTTT TTQHRSPTRF PPPSSSSSTP SASMHADNSP TPTIVTRTRS NRSPNPVIVL
101: RGSAAAPSSD VVSEGLDRSA FQMYYDDGTD SGLRPLPPSM TEFLLGSGFD RLLDQISQIE LNTNRNLRSC EHPPASKSAI EALPLIEIDP THLLSDSQSH
201: CAVCKENFVL KSSAREMPCN HIYHPDCILP WLAIRNSCPV CRHELPAEDL TDGTGAALTA VTATAEEEED SAAGLTIWRL PGGGFAVGRI PGGWRGGDRM
301: MPVVYTEVDG GRLGDERLPR RVAWGSRRGG RDGGGSRERG GGFAGRIMRL FGCFSGSSGS IAAAAAASSG SGSRIRVTRR TRSFSMFSTA SSSSRRRNWL
401: A
101: RGSAAAPSSD VVSEGLDRSA FQMYYDDGTD SGLRPLPPSM TEFLLGSGFD RLLDQISQIE LNTNRNLRSC EHPPASKSAI EALPLIEIDP THLLSDSQSH
201: CAVCKENFVL KSSAREMPCN HIYHPDCILP WLAIRNSCPV CRHELPAEDL TDGTGAALTA VTATAEEEED SAAGLTIWRL PGGGFAVGRI PGGWRGGDRM
301: MPVVYTEVDG GRLGDERLPR RVAWGSRRGG RDGGGSRERG GGFAGRIMRL FGCFSGSSGS IAAAAAASSG SGSRIRVTRR TRSFSMFSTA SSSSRRRNWL
401: A
Arabidopsis Description
RHC2AProbable E3 ubiquitin-protein ligase RHC2A [Source:UniProtKB/Swiss-Prot;Acc:O22283]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.