Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36069 | Canola | cytosol | 81.98 | 83.87 |
| CDX82271 | Canola | cytosol | 79.28 | 82.63 |
| Bra038246.1-P | Field mustard | nucleus | 100.0 | 68.31 |
| CDY33437 | Canola | cytosol | 95.95 | 65.74 |
| CDY24592 | Canola | nucleus | 81.98 | 56.7 |
| CDY25360 | Canola | cytosol, nucleus, plastid | 81.53 | 56.04 |
| AT3G19950.2 | Thale cress | cytosol | 81.53 | 46.89 |
| CDY22790 | Canola | nucleus | 44.59 | 36.67 |
| KRH36132 | Soybean | nucleus | 46.85 | 36.36 |
| KRG90622 | Soybean | nucleus | 48.2 | 35.91 |
| Zm00001d045625_P001 | Maize | cytosol | 49.1 | 35.16 |
| PGSC0003DMT400082489 | Potato | nucleus | 50.9 | 35.09 |
| Solyc04g009170.1.1 | Tomato | nucleus | 47.3 | 33.98 |
| EER89027 | Sorghum | nucleus | 49.1 | 33.96 |
| VIT_17s0053g00320.t01 | Wine grape | plastid | 54.05 | 32.52 |
| Os06t0101300-01 | Rice | nucleus | 47.75 | 31.36 |
| CDY42507 | Canola | cytosol | 47.75 | 31.27 |
| TraesCS7D01G000400.1 | Wheat | cytosol | 46.4 | 31.21 |
| TraesCS4A01G499200.1 | Wheat | cytosol, mitochondrion | 45.95 | 30.45 |
| CDX75998 | Canola | nucleus | 24.77 | 28.65 |
| HORVU7Hr1G000850.1 | Barley | cytosol, mitochondrion, nucleus | 44.59 | 27.73 |
| CDY46577 | Canola | nucleus | 33.78 | 25.77 |
| CDY26096 | Canola | nucleus | 32.88 | 24.83 |
| CDY22483 | Canola | mitochondrion | 33.78 | 24.75 |
| CDY56081 | Canola | nucleus | 26.58 | 24.69 |
| CDY35437 | Canola | mitochondrion, nucleus | 35.14 | 24.61 |
| CDY23878 | Canola | mitochondrion, nucleus | 32.88 | 23.93 |
| CDX72127 | Canola | mitochondrion | 33.33 | 23.42 |
| CDX94901 | Canola | cytosol | 32.88 | 23.25 |
| CDY27204 | Canola | mitochondrion, nucleus | 32.43 | 23.08 |
| CDY43991 | Canola | nucleus | 31.53 | 22.65 |
| CDY10554 | Canola | cytosol | 31.08 | 22.62 |
| CDY28208 | Canola | cytosol | 23.42 | 22.41 |
| CDY08249 | Canola | cytosol | 33.78 | 22.39 |
| CDY50031 | Canola | cytosol | 28.83 | 22.07 |
| CDX92768 | Canola | nucleus | 30.18 | 21.68 |
| CDY32791 | Canola | nucleus | 34.23 | 21.59 |
| CDY56022 | Canola | nucleus | 30.18 | 21.41 |
| CDY32333 | Canola | cytosol | 22.52 | 21.28 |
| CDX79968 | Canola | mitochondrion, nucleus | 28.38 | 21.21 |
| CDY56080 | Canola | cytosol | 26.58 | 20.77 |
| CDX92770 | Canola | nucleus | 30.18 | 20.68 |
| CDX74533 | Canola | cytosol | 27.03 | 20.55 |
| CDY42740 | Canola | nucleus | 29.28 | 20.19 |
| CDX74839 | Canola | cytosol, plastid | 29.28 | 20.06 |
| CDY20473 | Canola | nucleus, plastid | 30.18 | 20.06 |
| CDX94665 | Canola | nucleus | 21.17 | 20.0 |
| CDX89343 | Canola | cytosol, mitochondrion | 31.53 | 19.89 |
| CDY68603 | Canola | cytosol | 21.62 | 19.83 |
| CDX80258 | Canola | plastid | 31.53 | 19.72 |
| CDY61251 | Canola | cytosol | 31.98 | 19.67 |
| CDX81263 | Canola | cytosol, peroxisome, plastid | 25.23 | 19.31 |
| CDY53450 | Canola | cytosol | 27.48 | 18.94 |
| CDX88709 | Canola | cytosol, plastid | 33.33 | 18.78 |
| CDY18690 | Canola | cytosol, peroxisome, plastid | 25.23 | 18.73 |
| CDX94342 | Canola | mitochondrion, nucleus | 32.43 | 18.6 |
| CDY01669 | Canola | plastid | 27.03 | 18.58 |
| CDY24951 | Canola | nucleus | 31.08 | 18.4 |
| CDY07641 | Canola | nucleus | 30.63 | 18.18 |
| CDY48679 | Canola | cytosol, plastid | 27.03 | 17.96 |
| CDY33046 | Canola | plastid | 27.48 | 17.84 |
| CDX99105 | Canola | cytosol, plastid | 25.68 | 17.59 |
| CDY69134 | Canola | cytosol | 22.07 | 16.84 |
| CDX78323 | Canola | cytosol | 21.17 | 16.32 |
| CDY58938 | Canola | nucleus | 29.73 | 14.97 |
| CDX90972 | Canola | cytosol | 22.52 | 14.93 |
| CDY03622 | Canola | nucleus | 29.73 | 14.8 |
| CDY01221 | Canola | cytosol | 14.41 | 14.68 |
| CDX85531 | Canola | cytosol | 22.52 | 14.58 |
| CDX69496 | Canola | cytosol | 18.02 | 13.89 |
| CDX69973 | Canola | cytosol | 21.62 | 13.33 |
| CDY26465 | Canola | cytosol | 20.27 | 13.27 |
| CDY21513 | Canola | cytosol | 21.17 | 13.2 |
| CDY34722 | Canola | cytosol | 21.17 | 12.05 |
| CDY11934 | Canola | nucleus | 35.14 | 11.96 |
| CDY34721 | Canola | cytosol | 20.72 | 11.79 |
| CDY23599 | Canola | golgi, mitochondrion | 31.53 | 11.49 |
| CDY02194 | Canola | peroxisome | 20.27 | 11.31 |
| CDY51628 | Canola | peroxisome | 19.82 | 10.84 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078K0A9 |
| UniProt:A0A078K0A9 | EnsemblPlants:CDY72364 | ProteinID:CDY72364 | ProteinID:CDY72364.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0008270 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00028089001 | InterPro:IPR001841 | InterPro:IPR011016 | InterPro:IPR013083 |
| PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR44679 | PANTHER:PTHR44679:SF1 | SMART:SM00184 | SMART:SM00744 |
| SUPFAM:SSF57850 | UniParc:UPI0004EEC2C6 | InterPro:Znf_RING | InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
BnaAnng40830DBnaAnng40830D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K0A9]
Coordinates
chrLK050529:+:2..1881
Molecular Weight (calculated)
24334.2 Da
IEP (calculated)
4.512
GRAVY (calculated)
-0.741
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: PRSTENQPQG GGAFDPVSFL QNHLQHLQSS GTHVQFVIED HPSDPFSRIP GNMGDYFFGP GLEQLIQQLA ENDPNRYGTP PASKSAIDAL PTVKVTLDML
101: NSEMNQCAVC MDEFEDGGDV KQMPCKHVFH QDCLMPWLEL HNSCPVCRYE LPTDDPDYES RGQRGGQMMS GGGQGSVEGQ QTARRFSIQL PLRFRTQDGS
201: GSGRGSGSGS GSNLETRQED LD
101: NSEMNQCAVC MDEFEDGGDV KQMPCKHVFH QDCLMPWLEL HNSCPVCRYE LPTDDPDYES RGQRGGQMMS GGGQGSVEGQ QTARRFSIQL PLRFRTQDGS
201: GSGRGSGSGS GSNLETRQED LD
001: MEEAVVTRYW CHMCSQTVNP VMEAEIKCPF CQSGFVEEME DDDDHDSSDP ADVRANNSLW APILMELMND PVRRRRNQSV ESVEDNQNEV QTENNEDDGE
101: NDLDWQLQEI LRRRRRHSAA VLQLLQGIRA GLSVESESTG NGGNNPGRVI LINTSNQTIT VQNSADMDSV PAGSLGDYFI GPGFEMLLQR LAENDPNRYG
201: TPPAKKEAVE ALATVKIEET LQCSVCLDDF EIGTEAKLMP CTHKFHSDCL LPWLELHSSC PVCRYQLPAD EAKTDSVTTT SDNNGSSSAS ATTSHGAENS
301: DGNRRQEEEE EEEEEEEEEN ENNDGSGFSI PWPFSTLFSS SQDSNAPTDS S
101: NDLDWQLQEI LRRRRRHSAA VLQLLQGIRA GLSVESESTG NGGNNPGRVI LINTSNQTIT VQNSADMDSV PAGSLGDYFI GPGFEMLLQR LAENDPNRYG
201: TPPAKKEAVE ALATVKIEET LQCSVCLDDF EIGTEAKLMP CTHKFHSDCL LPWLELHSSC PVCRYQLPAD EAKTDSVTTT SDNNGSSSAS ATTSHGAENS
301: DGNRRQEEEE EEEEEEEEEN ENNDGSGFSI PWPFSTLFSS SQDSNAPTDS S
Arabidopsis Description
At1g55530/T5A14_7 [Source:UniProtKB/TrEMBL;Acc:Q9ZVU8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.