Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51628 | Canola | peroxisome | 96.23 | 94.33 |
| Bra013006.1-P | Field mustard | nucleus | 98.74 | 94.24 |
| AT5G60820.1 | Thale cress | cytosol | 76.63 | 72.79 |
| CDX78323 | Canola | cytosol | 35.43 | 48.96 |
| CDY69134 | Canola | cytosol | 34.67 | 47.42 |
| CDX69973 | Canola | cytosol | 40.45 | 44.72 |
| CDY21513 | Canola | cytosol | 38.94 | 43.54 |
| KRH03189 | Soybean | nucleus | 33.92 | 38.03 |
| KRH56750 | Soybean | cytosol | 32.66 | 38.01 |
| VIT_17s0000g04730.t01 | Wine grape | nucleus | 39.45 | 35.76 |
| PGSC0003DMT400063293 | Potato | nucleus | 35.43 | 32.64 |
| Os06t0633500-01 | Rice | cytosol, nucleus | 9.05 | 29.03 |
| CDX69496 | Canola | cytosol | 20.35 | 28.12 |
| Solyc03g114680.2.1 | Tomato | nucleus | 35.18 | 28.11 |
| GSMUA_Achr8P24510_001 | Banana | cytosol | 24.37 | 24.49 |
| CDY26465 | Canola | cytosol | 20.6 | 24.19 |
| Os08t0487500-01 | Rice | plastid | 15.58 | 22.88 |
| CDX82271 | Canola | cytosol | 12.06 | 22.54 |
| CDY36069 | Canola | cytosol | 12.06 | 22.12 |
| TraesCS7D01G246300.1 | Wheat | plastid | 14.82 | 21.93 |
| TraesCS7B01G144100.1 | Wheat | plastid | 14.82 | 21.93 |
| CDX75998 | Canola | nucleus | 10.55 | 21.88 |
| CDY34722 | Canola | cytosol | 21.36 | 21.79 |
| CDY34721 | Canola | cytosol | 21.36 | 21.79 |
| TraesCS7A01G247700.1 | Wheat | cytosol, plastid | 14.57 | 21.56 |
| Zm00001d031273_P001 | Maize | cytosol, plastid | 15.58 | 21.45 |
| CDX94665 | Canola | nucleus | 12.56 | 21.28 |
| EES14331 | Sorghum | plastid | 15.58 | 21.16 |
| CDX81263 | Canola | cytosol, peroxisome, plastid | 15.33 | 21.03 |
| CDY32333 | Canola | cytosol | 12.06 | 20.43 |
| CDY72364 | Canola | cytosol | 11.31 | 20.27 |
| CDY68603 | Canola | cytosol | 12.31 | 20.25 |
| CDY18690 | Canola | cytosol, peroxisome, plastid | 15.08 | 20.07 |
| TraesCS6A01G288800.1 | Wheat | cytosol, plastid | 15.33 | 19.87 |
| CDX99105 | Canola | cytosol, plastid | 15.83 | 19.44 |
| Zm00001d051736_P001 | Maize | cytosol | 16.08 | 19.39 |
| CDY22790 | Canola | nucleus | 13.07 | 19.26 |
| CDY53450 | Canola | cytosol | 15.58 | 19.25 |
| CDX85531 | Canola | cytosol | 16.58 | 19.24 |
| GSMUA_Achr3P06300_001 | Banana | cytosol | 25.13 | 19.16 |
| Zm00001d046663_P001 | Maize | cytosol | 14.32 | 19.13 |
| Os02t0727700-01 | Rice | cytosol, nucleus, plastid | 14.82 | 18.97 |
| TraesCS6B01G318600.1 | Wheat | cytosol, plastid | 14.57 | 18.89 |
| CDY61251 | Canola | cytosol | 17.09 | 18.84 |
| EER90075 | Sorghum | nucleus | 14.32 | 18.81 |
| OQU85475 | Sorghum | cytosol | 15.08 | 18.75 |
| CDX79968 | Canola | mitochondrion, nucleus | 13.82 | 18.52 |
| CDX90972 | Canola | cytosol | 15.58 | 18.51 |
| CDY23878 | Canola | mitochondrion, nucleus | 14.07 | 18.36 |
| CDY22483 | Canola | mitochondrion | 13.82 | 18.15 |
| CDX80258 | Canola | plastid | 16.08 | 18.03 |
| CDY35437 | Canola | mitochondrion, nucleus | 13.82 | 17.35 |
| CDY27204 | Canola | mitochondrion, nucleus | 13.57 | 17.31 |
| CDX74839 | Canola | cytosol, plastid | 14.07 | 17.28 |
| CDX88709 | Canola | cytosol, plastid | 17.09 | 17.26 |
| CDX72127 | Canola | mitochondrion | 13.57 | 17.09 |
| CDY48679 | Canola | cytosol, plastid | 14.32 | 17.07 |
| CDY10554 | Canola | cytosol | 13.07 | 17.05 |
| CDY33046 | Canola | plastid | 14.57 | 16.96 |
| CDY56022 | Canola | nucleus | 13.32 | 16.93 |
| CDY46577 | Canola | nucleus | 12.31 | 16.84 |
| CDY20473 | Canola | nucleus, plastid | 14.07 | 16.77 |
| CDX94901 | Canola | cytosol | 13.07 | 16.56 |
| CDX74533 | Canola | cytosol | 12.06 | 16.44 |
| CDY33437 | Canola | cytosol | 13.32 | 16.36 |
| CDY42507 | Canola | cytosol | 13.82 | 16.22 |
| CDY24592 | Canola | nucleus | 13.07 | 16.2 |
| CDY25360 | Canola | cytosol, nucleus, plastid | 13.07 | 16.1 |
| CDY28208 | Canola | cytosol | 9.3 | 15.95 |
| HORVU6Hr1G072430.1 | Barley | cytosol | 14.57 | 15.93 |
| Zm00001d053704_P001 | Maize | cytosol | 14.07 | 15.73 |
| CDY43991 | Canola | nucleus | 12.06 | 15.53 |
| CDY01669 | Canola | plastid | 12.56 | 15.48 |
| CDY07641 | Canola | nucleus | 14.32 | 15.24 |
| TraesCS6D01G160300.1 | Wheat | nucleus | 13.32 | 15.23 |
| CDY56080 | Canola | cytosol | 10.8 | 15.14 |
| CDY56081 | Canola | nucleus | 9.05 | 15.06 |
| CDY32791 | Canola | nucleus | 13.32 | 15.06 |
| TraesCS7D01G387300.1 | Wheat | cytosol | 12.31 | 15.03 |
| OQU84547 | Sorghum | cytoskeleton, cytosol, nucleus | 14.57 | 14.99 |
| CDY26096 | Canola | nucleus | 11.06 | 14.97 |
| CDY24951 | Canola | nucleus | 14.07 | 14.93 |
| TraesCS7B01G293600.1 | Wheat | cytosol | 12.31 | 14.85 |
| TraesCS7A01G391700.1 | Wheat | cytosol | 12.31 | 14.8 |
| Os02t0191500-01 | Rice | nucleus | 13.82 | 14.67 |
| CDY50031 | Canola | cytosol | 10.55 | 14.48 |
| HORVU6Hr1G034800.1 | Barley | cytosol, nucleus | 13.32 | 14.32 |
| CDX92768 | Canola | nucleus | 11.06 | 14.24 |
| CDY08249 | Canola | cytosol | 11.81 | 14.03 |
| CDY42740 | Canola | nucleus | 11.31 | 13.98 |
| CDY01221 | Canola | cytosol | 7.54 | 13.76 |
| CDX92770 | Canola | nucleus | 11.06 | 13.58 |
| CDY58938 | Canola | nucleus | 14.82 | 13.38 |
| CDY03622 | Canola | nucleus | 14.82 | 13.23 |
| TraesCS6B01G198800.1 | Wheat | nucleus | 13.32 | 13.22 |
| HORVU7Hr1G092570.1 | Barley | cytosol | 12.31 | 12.79 |
| CDX89343 | Canola | cytosol, mitochondrion | 11.06 | 12.5 |
| CDX94342 | Canola | mitochondrion, nucleus | 12.06 | 12.4 |
| CDY23599 | Canola | golgi, mitochondrion | 12.06 | 7.88 |
| CDY11934 | Canola | nucleus | 12.81 | 7.82 |
Protein Annotations
| EnsemblPlants:CDY02194 | EnsemblPlantsGene:GSBRNA2T00113605001 | Gene3D:3.30.40.10 | GO:A0A078ENB5 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR44290 | PFAM:PF13639 | PFscan:PS50089 | ProteinID:CDY02194 |
| ProteinID:CDY02194.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EEC28E | MapMan:35.1 |
Description
BnaA03g39730D
Coordinates
chrLK031932:-:640799..642034
Molecular Weight (calculated)
44903.6 Da
IEP (calculated)
3.700
GRAVY (calculated)
-0.677
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEMSYLQIH DANDAVLNHF NRNLHQRRQH HQSLSQILDS LPHWVQSDDD VDLYVSQSEF DVSAAGGLDL LERRSFVMDL FHQRVEQSQV SPLGDDYENR
101: DMRGGSLGLD FGLGLGSGRG FVDCDDDDDE DDLFDGIRYL GMDSGDVIVT VESGFDSDVE EDDPEKEIWG VDLNEEDEYV NDDDDDEDDS VTIPLCWDSL
201: NLEDNEEFEW EEVDDGDERE VSAEGDDNNS VSVSVSATIS QEDLAIGERR GYLGWEVLLN SRSLEFNLDD AESNMELYIG GDIDQQEDDE DYLHTTEYEM
301: LFEAEISSGL GKPPASKSFI KNLKVSPLTK EDVTEENDGD AMCCAVCREE MSVGNEVAEL PCSHKYHGEC IVPWLGIRNT CPVCRFELPS DETEQSRF
101: DMRGGSLGLD FGLGLGSGRG FVDCDDDDDE DDLFDGIRYL GMDSGDVIVT VESGFDSDVE EDDPEKEIWG VDLNEEDEYV NDDDDDEDDS VTIPLCWDSL
201: NLEDNEEFEW EEVDDGDERE VSAEGDDNNS VSVSVSATIS QEDLAIGERR GYLGWEVLLN SRSLEFNLDD AESNMELYIG GDIDQQEDDE DYLHTTEYEM
301: LFEAEISSGL GKPPASKSFI KNLKVSPLTK EDVTEENDGD AMCCAVCREE MSVGNEVAEL PCSHKYHGEC IVPWLGIRNT CPVCRFELPS DETEQSRF
001: MAEMSYLQID DANDAVFNHY RHQRRLHDHL RDQSFSQILY PLPHWIQSDD GDLYISETDF SSGDVSVSDL VFTTDDGLDL LDRRSFVMDL FHQRVEQSQV
101: TPLDNDGIDD FENYEMREDN VELDFGLEME SGNGFVDSDL VVNLNEHVDG MRLLGIESGD VIVTVESCFD SDDEDDQEKE ESEIWGIDLN EEDEYVNDDD
201: DNDDEEEDAS VTIPLCWDSL QLEDLGINNE DCEWEEVDSD DEREVLSVLA EADDNNSVSV SVAATISLED LAISERRGSS NLGWEVLLNS RSLEFNLDDA
301: ESNLELYIGD IDHEEEDYED YLHTTEYEML FEAEISSGIG KPPASKSFIK NLKVSPLSNE DVMENDDDAV CCAVCKEEMI VGKEVAELPC RHKYHSECIV
401: PWLGIRNTCP VCRFELPSD
101: TPLDNDGIDD FENYEMREDN VELDFGLEME SGNGFVDSDL VVNLNEHVDG MRLLGIESGD VIVTVESCFD SDDEDDQEKE ESEIWGIDLN EEDEYVNDDD
201: DNDDEEEDAS VTIPLCWDSL QLEDLGINNE DCEWEEVDSD DEREVLSVLA EADDNNSVSV SVAATISLED LAISERRGSS NLGWEVLLNS RSLEFNLDDA
301: ESNLELYIGD IDHEEEDYED YLHTTEYEML FEAEISSGIG KPPASKSFIK NLKVSPLSNE DVMENDDDAV CCAVCKEEMI VGKEVAELPC RHKYHSECIV
401: PWLGIRNTCP VCRFELPSD
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FJH4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.