Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037109.1-P | Field mustard | nucleus | 98.51 | 98.8 |
| CDY26096 | Canola | nucleus | 82.99 | 94.56 |
| CDY56022 | Canola | nucleus | 58.21 | 62.3 |
| CDY10554 | Canola | cytosol | 56.72 | 62.3 |
| AT1G55530.2 | Thale cress | nucleus | 62.39 | 59.54 |
| CDY56080 | Canola | cytosol | 45.37 | 53.52 |
| CDY50031 | Canola | cytosol | 46.27 | 53.45 |
| CDY46577 | Canola | nucleus | 44.48 | 51.2 |
| CDY56081 | Canola | nucleus | 35.82 | 50.21 |
| CDY43991 | Canola | nucleus | 46.27 | 50.16 |
| CDY28208 | Canola | cytosol | 32.84 | 47.41 |
| CDX92768 | Canola | nucleus | 40.6 | 44.01 |
| CDY32791 | Canola | nucleus | 45.97 | 43.75 |
| GSMUA_Achr11P... | Banana | nucleus | 34.93 | 43.33 |
| CDX92770 | Canola | nucleus | 40.9 | 42.28 |
| CDY42740 | Canola | nucleus | 40.0 | 41.61 |
| CDX89343 | Canola | cytosol, mitochondrion | 42.99 | 40.91 |
| Zm00001d010635_P001 | Maize | nucleus | 34.93 | 37.5 |
| Os05t0488800-01 | Rice | nucleus | 36.12 | 37.46 |
| CDX94342 | Canola | mitochondrion, nucleus | 42.69 | 36.95 |
| CDX82271 | Canola | cytosol | 22.99 | 36.15 |
| Zm00001d038528_P001 | Maize | cytosol | 35.82 | 36.04 |
| Os03t0812200-01 | Rice | nucleus | 39.4 | 35.77 |
| TraesCS1D01G305300.1 | Wheat | nucleus | 34.63 | 34.94 |
| TraesCS1B01G316300.1 | Wheat | nucleus | 34.33 | 34.64 |
| CDY36069 | Canola | cytosol | 22.39 | 34.56 |
| CDY72364 | Canola | cytosol | 22.39 | 33.78 |
| Zm00001d013005_P002 | Maize | nucleus | 36.42 | 32.88 |
| KXG37275 | Sorghum | nucleus | 35.82 | 31.33 |
| KXG22238 | Sorghum | plastid | 36.12 | 31.11 |
| TraesCS5D01G480800.1 | Wheat | nucleus | 37.31 | 30.94 |
| HORVU5Hr1G111530.1 | Barley | nucleus | 36.72 | 30.9 |
| TraesCS5B01G480100.1 | Wheat | nucleus | 37.01 | 30.85 |
| TraesCS5A01G467700.1 | Wheat | nucleus | 37.01 | 30.69 |
| HORVU1Hr1G068950.2 | Barley | golgi | 35.22 | 30.57 |
| CDY25360 | Canola | cytosol, nucleus, plastid | 27.46 | 28.48 |
| CDY24592 | Canola | nucleus | 27.16 | 28.35 |
| CDY33437 | Canola | cytosol | 27.16 | 28.09 |
| CDY23878 | Canola | mitochondrion, nucleus | 24.78 | 27.21 |
| CDX75998 | Canola | nucleus | 15.52 | 27.08 |
| CDY32333 | Canola | cytosol | 18.81 | 26.81 |
| CDY68603 | Canola | cytosol | 19.1 | 26.45 |
| CDY22790 | Canola | nucleus | 21.19 | 26.3 |
| CDX94665 | Canola | nucleus | 18.21 | 25.96 |
| CDY23599 | Canola | golgi, mitochondrion | 46.57 | 25.62 |
| CDY22483 | Canola | mitochondrion | 22.99 | 25.41 |
| CDY35437 | Canola | mitochondrion, nucleus | 23.88 | 25.24 |
| CDX79968 | Canola | mitochondrion, nucleus | 22.09 | 24.92 |
| CDY11934 | Canola | nucleus | 47.76 | 24.54 |
| CDX81263 | Canola | cytosol, peroxisome, plastid | 20.9 | 24.14 |
| CDY27204 | Canola | mitochondrion, nucleus | 22.39 | 24.04 |
| CDX72127 | Canola | mitochondrion | 22.39 | 23.73 |
| CDY18690 | Canola | cytosol, peroxisome, plastid | 20.6 | 23.08 |
| CDY42507 | Canola | cytosol | 23.28 | 23.01 |
| CDX74533 | Canola | cytosol | 20.0 | 22.95 |
| CDY53450 | Canola | cytosol | 21.79 | 22.67 |
| CDY61251 | Canola | cytosol | 23.58 | 21.88 |
| CDX80258 | Canola | plastid | 22.99 | 21.69 |
| CDX99105 | Canola | cytosol, plastid | 19.7 | 20.37 |
| CDY01669 | Canola | plastid | 19.1 | 19.81 |
| CDX88709 | Canola | cytosol, plastid | 23.28 | 19.8 |
| CDY48679 | Canola | cytosol, plastid | 19.1 | 19.16 |
| CDX94901 | Canola | cytosol | 17.91 | 19.11 |
| CDY07641 | Canola | nucleus | 21.19 | 18.98 |
| CDY24951 | Canola | nucleus | 21.19 | 18.93 |
| CDY33046 | Canola | plastid | 19.1 | 18.71 |
| CDY20473 | Canola | nucleus, plastid | 18.51 | 18.56 |
| CDX74839 | Canola | cytosol, plastid | 17.61 | 18.21 |
| CDY58938 | Canola | nucleus | 20.3 | 15.42 |
| CDY01221 | Canola | cytosol | 9.85 | 15.14 |
| CDY03622 | Canola | nucleus | 20.0 | 15.02 |
| CDX78323 | Canola | cytosol | 12.54 | 14.58 |
| CDY69134 | Canola | cytosol | 11.94 | 13.75 |
| CDX69496 | Canola | cytosol | 11.64 | 13.54 |
| CDY26465 | Canola | cytosol | 13.43 | 13.27 |
| CDX69973 | Canola | cytosol | 13.43 | 12.5 |
| CDY21513 | Canola | cytosol | 13.13 | 12.36 |
| CDY02194 | Canola | peroxisome | 14.03 | 11.81 |
| CDX90972 | Canola | cytosol | 11.64 | 11.64 |
| CDY51628 | Canola | peroxisome | 14.03 | 11.58 |
| CDY34722 | Canola | cytosol | 13.43 | 11.54 |
| CDY34721 | Canola | cytosol | 13.43 | 11.54 |
| CDX85531 | Canola | cytosol | 11.04 | 10.79 |
Protein Annotations
| EnsemblPlants:CDY08249 | EnsemblPlantsGene:GSBRNA2T00125575001 | Gene3D:3.30.40.10 | GO:A0A078F5B3 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR44576 | PANTHER:PTHR44576:SF1 | PFAM:PF13639 | PFAM:PF14369 |
| PFscan:PS50089 | ProteinID:CDY08249 | ProteinID:CDY08249.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI0004EF27FB | UniProt:A0A078F5B3 | MapMan:35.1 | : | : | : |
Description
BnaA05g13700DBnaA05g13700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F5B3]
Coordinates
chrLK031984:-:369667..371132
Molecular Weight (calculated)
37083.3 Da
IEP (calculated)
4.294
GRAVY (calculated)
-0.756
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEATNATSY WCHMCSQTVN AVMMEDEIKC PFCRSGFVEE MDEDRRATTT SIWAPILMEM MNNSATRNQS AESVENETGN GRDLDSQLQE ILRRRGRRSS
101: VSVVQLLRGV RALQPESSSN RDDDDNNHPS NGRLIVISPH HQIIAVPRSL VTDSMPDGSS LSDYFIGPGF EALLQRLAEN DPNRYGTPPA RKEDVESLAT
201: VKIQEPSLQC SVCLDDFEVG VEAKQMPCKH NFHADCLLPW LELHSSCPVC RYQLPTDETK TTADSATNDN NGVNESSSAS SSSSSQGTEN SDANRHEGEG
301: EEEENDDGNR NAFSIPWPFS SLFSSSSSQD RNSSD
101: VSVVQLLRGV RALQPESSSN RDDDDNNHPS NGRLIVISPH HQIIAVPRSL VTDSMPDGSS LSDYFIGPGF EALLQRLAEN DPNRYGTPPA RKEDVESLAT
201: VKIQEPSLQC SVCLDDFEVG VEAKQMPCKH NFHADCLLPW LELHSSCPVC RYQLPTDETK TTADSATNDN NGVNESSSAS SSSSSQGTEN SDANRHEGEG
301: EEEENDDGNR NAFSIPWPFS SLFSSSSSQD RNSSD
001: MEEAVVTRYW CHMCSQTVNP VMEAEIKCPF CQSGFVEEME DDDDHDSSDP ADVRANNSLW APILMELMND PVRRRRNQSV ESVEDNQNEV QTENNEDDGE
101: NDLDWQLQEI LRRRRRHSAA VLQLLQGIRA GLSVESESTG NGGNNPGRVI LINTSNQTIT VQNSADMDSV PAGSLGDYFI GPGFEMLLQR LAENDPNRYG
201: TPPAKKEAVE ALATVKIEET LQCSVCLDDF EIGTEAKLMP CTHKFHSDCL LPWLELHSSC PVCRYQLPAD EAKTDSVTTT SDNNGSSSAS ATTSHGAENS
301: DGNRRQEEEE EEEEEEEEEN ENNDGSGFSI PWPFSTLFSS SQDSNAPTDS S
101: NDLDWQLQEI LRRRRRHSAA VLQLLQGIRA GLSVESESTG NGGNNPGRVI LINTSNQTIT VQNSADMDSV PAGSLGDYFI GPGFEMLLQR LAENDPNRYG
201: TPPAKKEAVE ALATVKIEET LQCSVCLDDF EIGTEAKLMP CTHKFHSDCL LPWLELHSSC PVCRYQLPAD EAKTDSVTTT SDNNGSSSAS ATTSHGAENS
301: DGNRRQEEEE EEEEEEEEEN ENNDGSGFSI PWPFSTLFSS SQDSNAPTDS S
Arabidopsis Description
At1g55530/T5A14_7 [Source:UniProtKB/TrEMBL;Acc:Q9ZVU8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.