Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69496 | Canola | cytosol | 62.83 | 73.96 |
| Os06t0633500-01 | Rice | cytosol, nucleus | 12.68 | 34.68 |
| CDX90972 | Canola | cytosol | 32.45 | 32.84 |
| CDX85531 | Canola | cytosol | 32.45 | 32.07 |
| AT5G15820.1 | Thale cress | cytosol | 31.86 | 31.03 |
| KRH18313 | Soybean | nucleus | 27.14 | 24.6 |
| CDX78323 | Canola | cytosol | 20.65 | 24.31 |
| CDY34722 | Canola | cytosol | 27.73 | 24.1 |
| CDY34721 | Canola | cytosol | 27.14 | 23.59 |
| KRG93748 | Soybean | nucleus, plastid | 26.25 | 23.42 |
| CDY69134 | Canola | cytosol | 19.47 | 22.68 |
| CDY36069 | Canola | cytosol | 13.86 | 21.66 |
| VIT_14s0083g00710.t01 | Wine grape | nucleus | 24.48 | 21.23 |
| CDX82271 | Canola | cytosol | 13.27 | 21.13 |
| GSMUA_Achr8P24510_001 | Banana | cytosol | 24.48 | 20.96 |
| Solyc02g089410.2.1 | Tomato | nucleus | 20.06 | 20.8 |
| CDY02194 | Canola | peroxisome | 24.19 | 20.6 |
| CDX69973 | Canola | cytosol | 21.83 | 20.56 |
| CDX75998 | Canola | nucleus | 11.5 | 20.31 |
| CDY72364 | Canola | cytosol | 13.27 | 20.27 |
| CDY51628 | Canola | peroxisome | 24.19 | 20.2 |
| Solyc02g065650.1.1 | Tomato | cytosol, nucleus, plastid | 23.6 | 20.15 |
| PGSC0003DMT400003515 | Potato | nucleus | 21.83 | 19.95 |
| CDY68603 | Canola | cytosol | 14.16 | 19.83 |
| CDX94665 | Canola | nucleus | 13.57 | 19.57 |
| CDY32333 | Canola | cytosol | 13.57 | 19.57 |
| CDY21513 | Canola | cytosol | 20.35 | 19.38 |
| CDX81263 | Canola | cytosol, peroxisome, plastid | 16.52 | 19.31 |
| PGSC0003DMT400068309 | Potato | cytosol | 22.42 | 19.1 |
| CDY18690 | Canola | cytosol, peroxisome, plastid | 16.52 | 18.73 |
| TraesCS7D01G246300.1 | Wheat | plastid | 14.75 | 18.59 |
| TraesCS7B01G144100.1 | Wheat | plastid | 14.45 | 18.22 |
| Os08t0487500-01 | Rice | plastid | 14.45 | 18.08 |
| TraesCS7A01G247700.1 | Wheat | cytosol, plastid | 14.16 | 17.84 |
| OQU85475 | Sorghum | cytosol | 16.81 | 17.81 |
| Os02t0727700-01 | Rice | cytosol, nucleus, plastid | 15.63 | 17.04 |
| Zm00001d051736_P001 | Maize | cytosol | 16.52 | 16.97 |
| TraesCS6B01G318600.1 | Wheat | cytosol, plastid | 15.34 | 16.94 |
| TraesCS7D01G387300.1 | Wheat | cytosol | 16.22 | 16.87 |
| EER90075 | Sorghum | nucleus | 15.04 | 16.83 |
| Zm00001d046663_P001 | Maize | cytosol | 14.75 | 16.78 |
| CDY22790 | Canola | nucleus | 13.27 | 16.67 |
| TraesCS6A01G288800.1 | Wheat | cytosol, plastid | 15.04 | 16.61 |
| TraesCS6D01G160300.1 | Wheat | nucleus | 16.81 | 16.38 |
| TraesCS7B01G293600.1 | Wheat | cytosol | 15.93 | 16.36 |
| GSMUA_Achr3P06300_001 | Banana | cytosol | 25.07 | 16.28 |
| TraesCS7A01G391700.1 | Wheat | cytosol | 15.63 | 16.01 |
| Zm00001d053704_P001 | Maize | cytosol | 16.81 | 16.01 |
| CDY56022 | Canola | nucleus | 14.45 | 15.65 |
| HORVU6Hr1G034800.1 | Barley | cytosol, nucleus | 16.81 | 15.41 |
| CDY26096 | Canola | nucleus | 13.27 | 15.31 |
| Zm00001d031273_P001 | Maize | cytosol, plastid | 12.98 | 15.22 |
| CDY46577 | Canola | nucleus | 12.98 | 15.12 |
| CDY10554 | Canola | cytosol | 13.57 | 15.08 |
| EES14331 | Sorghum | plastid | 12.98 | 15.02 |
| OQU84547 | Sorghum | cytoskeleton, cytosol, nucleus | 17.11 | 14.99 |
| CDY56080 | Canola | cytosol | 12.39 | 14.79 |
| CDX74533 | Canola | cytosol | 12.68 | 14.73 |
| CDY43991 | Canola | nucleus | 13.27 | 14.56 |
| TraesCS6B01G198800.1 | Wheat | nucleus | 17.11 | 14.46 |
| CDY42507 | Canola | cytosol | 14.45 | 14.45 |
| CDY20473 | Canola | nucleus, plastid | 14.16 | 14.37 |
| HORVU7Hr1G092570.1 | Barley | cytosol | 16.22 | 14.36 |
| HORVU6Hr1G072430.1 | Barley | cytosol | 15.34 | 14.29 |
| CDY01221 | Canola | cytosol | 9.14 | 14.22 |
| CDY33437 | Canola | cytosol | 13.57 | 14.2 |
| CDY27204 | Canola | mitochondrion, nucleus | 12.98 | 14.1 |
| CDY24592 | Canola | nucleus | 13.27 | 14.02 |
| CDY25360 | Canola | cytosol, nucleus, plastid | 13.27 | 13.93 |
| CDX72127 | Canola | mitochondrion | 12.98 | 13.92 |
| CDX99105 | Canola | cytosol, plastid | 13.27 | 13.89 |
| CDY56081 | Canola | nucleus | 9.73 | 13.81 |
| CDY50031 | Canola | cytosol | 11.8 | 13.79 |
| CDY23878 | Canola | mitochondrion, nucleus | 12.39 | 13.77 |
| CDY42740 | Canola | nucleus | 12.98 | 13.66 |
| CDY53450 | Canola | cytosol | 12.98 | 13.66 |
| CDY01669 | Canola | plastid | 12.98 | 13.62 |
| CDX74839 | Canola | cytosol, plastid | 12.98 | 13.58 |
| CDY08249 | Canola | cytosol | 13.27 | 13.43 |
| CDY28208 | Canola | cytosol | 9.14 | 13.36 |
| CDX92770 | Canola | nucleus | 12.68 | 13.27 |
| CDX92768 | Canola | nucleus | 12.09 | 13.27 |
| CDX79968 | Canola | mitochondrion, nucleus | 11.5 | 13.13 |
| CDY07641 | Canola | nucleus | 14.45 | 13.1 |
| CDX89343 | Canola | cytosol, mitochondrion | 13.57 | 13.07 |
| CDY32791 | Canola | nucleus | 13.57 | 13.07 |
| CDY24951 | Canola | nucleus | 14.45 | 13.07 |
| CDX94901 | Canola | cytosol | 12.09 | 13.06 |
| CDX80258 | Canola | plastid | 13.57 | 12.96 |
| CDY22483 | Canola | mitochondrion | 11.5 | 12.87 |
| CDY33046 | Canola | plastid | 12.98 | 12.87 |
| CDY48679 | Canola | cytosol, plastid | 12.39 | 12.57 |
| Os02t0191500-01 | Rice | nucleus | 13.86 | 12.53 |
| CDY61251 | Canola | cytosol | 13.27 | 12.47 |
| CDY35437 | Canola | mitochondrion, nucleus | 11.5 | 12.3 |
| CDX88709 | Canola | cytosol, plastid | 13.57 | 11.68 |
| CDX94342 | Canola | mitochondrion, nucleus | 13.27 | 11.63 |
| CDY58938 | Canola | nucleus | 13.57 | 10.43 |
| CDY03622 | Canola | nucleus | 13.57 | 10.31 |
| CDY23599 | Canola | golgi, mitochondrion | 13.27 | 7.39 |
| CDY11934 | Canola | nucleus | 12.98 | 6.75 |
Protein Annotations
| EnsemblPlants:CDY26465 | EnsemblPlantsGene:GSBRNA2T00035268001 | Gene3D:3.30.40.10 | GO:A0A078GIY9 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR44679 | PFAM:PF13639 | PFscan:PS50089 | ProteinID:CDY26465 |
| ProteinID:CDY26465.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EF3CD8 | UniProt:A0A078GIY9 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC09g42030DBnaC09g42030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GIY9]
Coordinates
chrLK032190:+:298877..299896
Molecular Weight (calculated)
37457.2 Da
IEP (calculated)
3.868
GRAVY (calculated)
-0.469
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKLFGFPIN VEEDGGRGGG GGSSTNAEAS RSAMNLSAGL PQRETNPYPR FSESGSSPMD SESNLENSFI DFFGRESHEI ETAGRNQMQR VSRGVDMEED
101: GEIDLRLGIG SGAGSGQIRC DSVTGDKETD SGRVEAGTDL IEELFCAEEE EGMLMADDEV LDWELDPVQP TSHVEEGDEL ALPVNNYALL EDFNEEALDD
201: FMMGVFEGSS IMDVTYEDIL AIFPEPGGDD HVDYFDVFVQ PFDQEPSVMA SPPASKRVVD ELPVVEITSE ELSSGNIACA ICIGDFVVKE KVSRLPCWHY
301: YHGECILPWL EMKNTCPVCR FELPTDDLEY ERNRRDHRG
101: GEIDLRLGIG SGAGSGQIRC DSVTGDKETD SGRVEAGTDL IEELFCAEEE EGMLMADDEV LDWELDPVQP TSHVEEGDEL ALPVNNYALL EDFNEEALDD
201: FMMGVFEGSS IMDVTYEDIL AIFPEPGGDD HVDYFDVFVQ PFDQEPSVMA SPPASKRVVD ELPVVEITSE ELSSGNIACA ICIGDFVVKE KVSRLPCWHY
301: YHGECILPWL EMKNTCPVCR FELPTDDLEY ERNRRDHRG
001: MSSAKLFGCS INVNVEAEEE EGGDGGSSTN VEVSRSGNQP DCEAMSFSNQ MEIGVRNTYY QFLESNSDSG SDSMYAEPEF IDFFDRESYE VDTVREVCVS
101: SNQRVSTPGY FNIWDQDVDL GLGIGLGSRS GSGQLPGDSG GVGVEVGRGV TPVEYNLFGE EAMVVDEVLE WENFNNAIHL VQEPAYASME GEEEEEEDEV
201: VMEFAASIYS DAWEILLYDN MTNSAPMDLD VEVWLDSVDG YAPMDYNAII GQMFDNETGI KGTPPASKSV VDGLPDVELT IEELSSVSIV CAICKDEVVF
301: KEKVKRLPCK HYYHGECIIP WLGIRNTCPV CRHELPTDDL EYERKRRA
101: SNQRVSTPGY FNIWDQDVDL GLGIGLGSRS GSGQLPGDSG GVGVEVGRGV TPVEYNLFGE EAMVVDEVLE WENFNNAIHL VQEPAYASME GEEEEEEDEV
201: VMEFAASIYS DAWEILLYDN MTNSAPMDLD VEVWLDSVDG YAPMDYNAII GQMFDNETGI KGTPPASKSV VDGLPDVELT IEELSSVSIV CAICKDEVVF
301: KEKVKRLPCK HYYHGECIIP WLGIRNTCPV CRHELPTDDL EYERKRRA
Arabidopsis Description
AT5g15820/F14F8_200 [Source:UniProtKB/TrEMBL;Acc:Q9LFU4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.