Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG93748 | Soybean | nucleus, plastid | 43.48 | 44.74 |
| KRH18313 | Soybean | nucleus | 42.2 | 44.12 |
| Os06t0633500-01 | Rice | cytosol, nucleus | 13.3 | 41.94 |
| Solyc02g065650.1.1 | Tomato | cytosol, nucleus, plastid | 41.43 | 40.81 |
| PGSC0003DMT400068309 | Potato | cytosol | 41.43 | 40.7 |
| Solyc02g089410.2.1 | Tomato | nucleus | 33.25 | 39.76 |
| PGSC0003DMT400003515 | Potato | nucleus | 36.57 | 38.54 |
| GSMUA_Achr8P24510_001 | Banana | cytosol | 32.99 | 32.58 |
| VIT_17s0000g04730.t01 | Wine grape | nucleus | 35.81 | 31.89 |
| CDY34721 | Canola | cytosol | 29.67 | 29.74 |
| CDY34722 | Canola | cytosol | 29.67 | 29.74 |
| AT3G02340.2 | Thale cress | cytosol | 30.95 | 29.58 |
| Bra021467.1-P | Field mustard | nucleus | 29.41 | 29.49 |
| CDX90972 | Canola | cytosol | 22.25 | 25.97 |
| CDX85531 | Canola | cytosol | 22.76 | 25.95 |
| AT5G15820.1 | Thale cress | cytosol | 22.76 | 25.57 |
| GSMUA_Achr3P06300_001 | Banana | cytosol | 33.76 | 25.29 |
| Bra008671.1-P | Field mustard | nucleus | 18.16 | 24.74 |
| CDY26465 | Canola | cytosol | 21.23 | 24.48 |
| CDX69496 | Canola | cytosol | 17.9 | 24.31 |
| Bra023539.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 24.04 | 23.68 |
| Os02t0727700-01 | Rice | cytosol, nucleus, plastid | 18.16 | 22.83 |
| OQU85475 | Sorghum | cytosol | 18.67 | 22.81 |
| TraesCS6A01G288800.1 | Wheat | cytosol, plastid | 17.9 | 22.8 |
| TraesCS6B01G318600.1 | Wheat | cytosol, plastid | 17.39 | 22.15 |
| TraesCS7B01G144100.1 | Wheat | plastid | 14.83 | 21.56 |
| Zm00001d051736_P001 | Maize | cytosol | 17.9 | 21.21 |
| Zm00001d046663_P001 | Maize | cytosol | 16.11 | 21.14 |
| TraesCS7A01G247700.1 | Wheat | cytosol, plastid | 14.32 | 20.82 |
| Os08t0487500-01 | Rice | plastid | 14.32 | 20.66 |
| TraesCS7D01G246300.1 | Wheat | plastid | 14.07 | 20.45 |
| VIT_18s0001g14530.t01 | Wine grape | cytosol, nucleus, plastid | 17.39 | 20.36 |
| EES14331 | Sorghum | plastid | 14.83 | 19.8 |
| Zm00001d031273_P001 | Maize | cytosol, plastid | 14.58 | 19.72 |
| EER90075 | Sorghum | nucleus | 15.09 | 19.47 |
| VIT_12s0034g01400.t01 | Wine grape | endoplasmic reticulum, mitochondrion, nucleus, plastid | 12.79 | 19.16 |
| HORVU6Hr1G072430.1 | Barley | cytosol | 17.14 | 18.41 |
| VIT_08s0040g00590.t01 | Wine grape | nucleus | 14.32 | 17.83 |
| TraesCS7D01G387300.1 | Wheat | cytosol | 14.83 | 17.79 |
| TraesCS7B01G293600.1 | Wheat | cytosol | 14.83 | 17.58 |
| TraesCS7A01G391700.1 | Wheat | cytosol | 14.83 | 17.52 |
| Zm00001d053704_P001 | Maize | cytosol | 15.6 | 17.13 |
| OQU84547 | Sorghum | cytoskeleton, cytosol, nucleus | 16.37 | 16.54 |
| VIT_17s0053g00320.t01 | Wine grape | plastid | 15.6 | 16.53 |
| TraesCS6D01G160300.1 | Wheat | nucleus | 14.58 | 16.38 |
| HORVU6Hr1G034800.1 | Barley | cytosol, nucleus | 15.35 | 16.22 |
| VIT_06s0009g02350.t01 | Wine grape | mitochondrion | 13.81 | 16.07 |
| HORVU7Hr1G092570.1 | Barley | cytosol | 15.6 | 15.93 |
| VIT_06s0004g05090.t01 | Wine grape | mitochondrion, nucleus | 15.35 | 15.54 |
| Os02t0191500-01 | Rice | nucleus | 14.83 | 15.47 |
| VIT_17s0000g08400.t01 | Wine grape | nucleus | 5.63 | 15.38 |
| VIT_18s0001g03270.t01 | Wine grape | nucleus | 12.02 | 14.11 |
| TraesCS6B01G198800.1 | Wheat | nucleus | 14.32 | 13.97 |
| VIT_06s0004g00120.t01 | Wine grape | nucleus | 12.53 | 13.32 |
| VIT_08s0007g00720.t01 | Wine grape | plastid | 15.09 | 11.43 |
| VIT_12s0034g01390.t01 | Wine grape | mitochondrion | 13.04 | 11.31 |
| VIT_08s0056g00320.t01 | Wine grape | mitochondrion | 14.83 | 9.83 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.1 | EMBL:AM453292 | ProteinID:CAN63309 | ProteinID:CAN63309.1 | ProteinID:CCB44072 |
| ProteinID:CCB44072.1 | UniProt:F6GVT7 | EMBL:FN594955 | GO:GO:0000209 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016740 |
| GO:GO:0019538 | GO:GO:0042787 | GO:GO:0043161 | GO:GO:0061630 | InterPro:IPR001841 | InterPro:IPR013083 |
| PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR44679 | PANTHER:PTHR44679:SF3 | SMART:SM00184 | SUPFAM:SSF57850 |
| TIGR:TC67286 | UniParc:UPI0001984B49 | ArrayExpress:VIT_14s0083g00710 | EnsemblPlantsGene:VIT_14s0083g00710 | EnsemblPlants:VIT_14s0083g00710.t01 | unigene:Vvi.566 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr14:-:22855118..22856402
Molecular Weight (calculated)
43709.2 Da
IEP (calculated)
3.740
GRAVY (calculated)
-0.611
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGVSDAQFP QEPSVVYEDV ETLRSIPIFS NYDHFYSYDS DGDCFYGQDQ VDMVTNLFEN RSEDFRNADD DGDSGLDPFS DDLDLRILGV GSEVEQNHGD
101: EFGLGLGTGF ESDKMAWASE SGESSSVHGE NASAVAYGLR VVGIGSDSDS DSEDDGVEFS SEVNDDYGLD RVEDLDPRLY WDCLPLEDTR TNNEDFEWEQ
201: VDERASLSLA VNGVDELSLS SEISSEEEEE EEAGDGRDEA ARSLDWEVLL AMNNLERTLN LEHDLDIDSF FTDQDDYVNA TEYVTLFGLF TEDDAGLKGS
301: PPAAKSVVQN LPVVELTQQY LEKNNVVCAV CKDEILLEEK VKRLPCSHHY HGDCIVPWLS IRNTCPVCRY ELPTDDPEYE HMKSQRTGRG L
101: EFGLGLGTGF ESDKMAWASE SGESSSVHGE NASAVAYGLR VVGIGSDSDS DSEDDGVEFS SEVNDDYGLD RVEDLDPRLY WDCLPLEDTR TNNEDFEWEQ
201: VDERASLSLA VNGVDELSLS SEISSEEEEE EEAGDGRDEA ARSLDWEVLL AMNNLERTLN LEHDLDIDSF FTDQDDYVNA TEYVTLFGLF TEDDAGLKGS
301: PPAAKSVVQN LPVVELTQQY LEKNNVVCAV CKDEILLEEK VKRLPCSHHY HGDCIVPWLS IRNTCPVCRY ELPTDDPEYE HMKSQRTGRG L
001: MASTKPDSAI NLEEEAEGDG VAVDDPIFIP ETTNLLVRYS PFDDRDIDCN PYFPFTGPIS DSGSGSYSDS EPDPNSCPID FFDRDSSDVD VAEYLESGGL
101: TAGDYNIWGF YDPKEDEEEE EIVLGTSGSD LQPGDSGEQG LRVTGIDSDS DCEDGVFDFI SEDSSGNRGN DSGRVEVGTG LPPVWDHLFG EGTVLADEEW
201: EEVQNAINWT AFSGPEDEDE EDELSSLSRD DEEEDHELDW QVLLTVNNVV NYIEQAEGIM LNPDDIDPDY YLYLSGLDEF DENHSGHYDA DAILGQMFDD
301: ETGIRGNPPA AKSVIQDLPV VELAVEELDK GNNVCAVCKD EMLVEEKVRR LPCSHFYHGE CIIPWLGIRN TCPVCRYELP TDDLEYERHK SSERGDTGLA
401: RNVLPGRYS
101: TAGDYNIWGF YDPKEDEEEE EIVLGTSGSD LQPGDSGEQG LRVTGIDSDS DCEDGVFDFI SEDSSGNRGN DSGRVEVGTG LPPVWDHLFG EGTVLADEEW
201: EEVQNAINWT AFSGPEDEDE EDELSSLSRD DEEEDHELDW QVLLTVNNVV NYIEQAEGIM LNPDDIDPDY YLYLSGLDEF DENHSGHYDA DAILGQMFDD
301: ETGIRGNPPA AKSVIQDLPV VELAVEELDK GNNVCAVCKD EMLVEEKVRR LPCSHFYHGE CIIPWLGIRN TCPVCRYELP TDDLEYERHK SSERGDTGLA
401: RNVLPGRYS
Arabidopsis Description
At3g02340 [Source:UniProtKB/TrEMBL;Acc:Q9FWA5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.