Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85531 | Canola | cytosol | 78.21 | 76.38 |
| AT5G15820.1 | Thale cress | cytosol | 45.97 | 44.25 |
| Os06t0633500-01 | Rice | cytosol, nucleus | 14.63 | 39.52 |
| CDX69496 | Canola | cytosol | 29.25 | 34.03 |
| CDY34722 | Canola | cytosol | 38.21 | 32.82 |
| CDY34721 | Canola | cytosol | 37.91 | 32.56 |
| CDY26465 | Canola | cytosol | 32.84 | 32.45 |
| CDX82271 | Canola | cytosol | 15.52 | 24.41 |
| CDY36069 | Canola | cytosol | 15.52 | 23.96 |
| CDY72364 | Canola | cytosol | 14.93 | 22.52 |
| VIT_14s0083g00710.t01 | Wine grape | nucleus | 25.97 | 22.25 |
| KRH18313 | Soybean | nucleus | 24.78 | 22.19 |
| KRG93748 | Soybean | nucleus, plastid | 23.88 | 21.05 |
| CDY32333 | Canola | cytosol | 14.63 | 20.85 |
| CDY68603 | Canola | cytosol | 14.93 | 20.66 |
| CDX75998 | Canola | nucleus | 11.64 | 20.31 |
| CDX94665 | Canola | nucleus | 14.03 | 20.0 |
| Solyc02g089410.2.1 | Tomato | nucleus | 19.4 | 19.88 |
| PGSC0003DMT400068309 | Potato | cytosol | 23.58 | 19.85 |
| PGSC0003DMT400003515 | Potato | nucleus | 21.79 | 19.68 |
| Solyc02g065650.1.1 | Tomato | cytosol, nucleus, plastid | 23.28 | 19.65 |
| CDY22790 | Canola | nucleus | 15.82 | 19.63 |
| CDY69134 | Canola | cytosol | 16.72 | 19.24 |
| CDX78323 | Canola | cytosol | 16.42 | 19.1 |
| CDX81263 | Canola | cytosol, peroxisome, plastid | 16.12 | 18.62 |
| CDY18690 | Canola | cytosol, peroxisome, plastid | 16.12 | 18.06 |
| GSMUA_Achr8P24510_001 | Banana | cytosol | 21.19 | 17.93 |
| EER90075 | Sorghum | nucleus | 16.12 | 17.82 |
| Zm00001d046663_P001 | Maize | cytosol | 15.82 | 17.79 |
| Os08t0487500-01 | Rice | plastid | 14.33 | 17.71 |
| CDX69973 | Canola | cytosol | 18.51 | 17.22 |
| TraesCS7D01G387300.1 | Wheat | cytosol | 16.42 | 16.87 |
| GSMUA_Achr3P06300_001 | Banana | cytosol | 26.27 | 16.86 |
| CDY21513 | Canola | cytosol | 17.91 | 16.85 |
| CDY24592 | Canola | nucleus | 16.12 | 16.82 |
| TraesCS7D01G246300.1 | Wheat | plastid | 13.43 | 16.73 |
| Os02t0727700-01 | Rice | cytosol, nucleus, plastid | 15.52 | 16.72 |
| TraesCS6B01G318600.1 | Wheat | cytosol, plastid | 15.22 | 16.61 |
| Zm00001d053704_P001 | Maize | cytosol | 17.61 | 16.57 |
| CDY25360 | Canola | cytosol, nucleus, plastid | 15.82 | 16.41 |
| Zm00001d051736_P001 | Maize | cytosol | 16.12 | 16.36 |
| CDY33437 | Canola | cytosol | 15.82 | 16.36 |
| CDY42507 | Canola | cytosol | 16.42 | 16.22 |
| TraesCS7B01G293600.1 | Wheat | cytosol | 15.82 | 16.06 |
| TraesCS7A01G391700.1 | Wheat | cytosol | 15.82 | 16.01 |
| TraesCS7A01G247700.1 | Wheat | cytosol, plastid | 12.84 | 15.99 |
| TraesCS7B01G144100.1 | Wheat | plastid | 12.84 | 15.99 |
| TraesCS6A01G288800.1 | Wheat | cytosol, plastid | 14.63 | 15.96 |
| OQU85475 | Sorghum | cytosol | 15.22 | 15.94 |
| Zm00001d031273_P001 | Maize | cytosol, plastid | 13.73 | 15.92 |
| CDY51628 | Canola | peroxisome | 19.1 | 15.76 |
| CDX74533 | Canola | cytosol | 13.73 | 15.75 |
| EES14331 | Sorghum | plastid | 13.73 | 15.7 |
| CDY02194 | Canola | peroxisome | 18.51 | 15.58 |
| CDY27204 | Canola | mitochondrion, nucleus | 14.03 | 15.06 |
| CDX72127 | Canola | mitochondrion | 14.03 | 14.87 |
| CDY01669 | Canola | plastid | 14.33 | 14.86 |
| CDX94901 | Canola | cytosol | 13.73 | 14.65 |
| CDX92768 | Canola | nucleus | 13.43 | 14.56 |
| OQU84547 | Sorghum | cytoskeleton, cytosol, nucleus | 16.72 | 14.47 |
| CDY46577 | Canola | nucleus | 12.54 | 14.43 |
| CDY23878 | Canola | mitochondrion, nucleus | 13.13 | 14.43 |
| CDY53450 | Canola | cytosol | 13.73 | 14.29 |
| CDY01221 | Canola | cytosol | 9.25 | 14.22 |
| HORVU7Hr1G092570.1 | Barley | cytosol | 16.12 | 14.1 |
| CDY42740 | Canola | nucleus | 13.43 | 13.98 |
| CDY43991 | Canola | nucleus | 12.84 | 13.92 |
| CDX92770 | Canola | nucleus | 13.43 | 13.89 |
| CDX99105 | Canola | cytosol, plastid | 13.43 | 13.89 |
| CDY22483 | Canola | mitochondrion | 12.54 | 13.86 |
| CDY28208 | Canola | cytosol | 9.55 | 13.79 |
| HORVU6Hr1G072430.1 | Barley | cytosol | 14.93 | 13.74 |
| CDY48679 | Canola | cytosol, plastid | 13.43 | 13.47 |
| CDY33046 | Canola | plastid | 13.73 | 13.45 |
| CDX89343 | Canola | cytosol, mitochondrion | 14.03 | 13.35 |
| CDY26096 | Canola | nucleus | 11.64 | 13.27 |
| CDY35437 | Canola | mitochondrion, nucleus | 12.54 | 13.25 |
| CDY20473 | Canola | nucleus, plastid | 13.13 | 13.17 |
| CDX79968 | Canola | mitochondrion, nucleus | 11.64 | 13.13 |
| CDX80258 | Canola | plastid | 13.73 | 12.96 |
| CDY50031 | Canola | cytosol | 11.04 | 12.76 |
| CDX74839 | Canola | cytosol, plastid | 12.24 | 12.65 |
| TraesCS6D01G160300.1 | Wheat | nucleus | 13.13 | 12.64 |
| CDY56081 | Canola | nucleus | 8.96 | 12.55 |
| CDY32791 | Canola | nucleus | 13.13 | 12.5 |
| CDX88709 | Canola | cytosol, plastid | 14.63 | 12.44 |
| CDY56080 | Canola | cytosol | 10.45 | 12.32 |
| CDY61251 | Canola | cytosol | 13.13 | 12.19 |
| CDX94342 | Canola | mitochondrion, nucleus | 14.03 | 12.14 |
| CDY56022 | Canola | nucleus | 11.34 | 12.14 |
| CDY10554 | Canola | cytosol | 11.04 | 12.13 |
| CDY24951 | Canola | nucleus | 13.43 | 12.0 |
| HORVU6Hr1G034800.1 | Barley | cytosol, nucleus | 13.13 | 11.89 |
| CDY07641 | Canola | nucleus | 13.13 | 11.76 |
| CDY08249 | Canola | cytosol | 11.64 | 11.64 |
| CDY58938 | Canola | nucleus | 15.22 | 11.56 |
| Os02t0191500-01 | Rice | nucleus | 12.84 | 11.47 |
| CDY03622 | Canola | nucleus | 15.22 | 11.44 |
| TraesCS6B01G198800.1 | Wheat | nucleus | 13.13 | 10.97 |
| CDY11934 | Canola | nucleus | 14.33 | 7.36 |
| CDY23599 | Canola | golgi, mitochondrion | 12.84 | 7.06 |
Protein Annotations
| EnsemblPlants:CDX90972 | EnsemblPlantsGene:GSBRNA2T00151728001 | Gene3D:3.30.40.10 | GO:A0A078DPV7 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR44679 | PFAM:PF13639 | PFscan:PS50089 | ProteinID:CDX90972 |
| ProteinID:CDX90972.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EDF849 | MapMan:35.1 |
Description
BnaC02g06250D
Coordinates
chrLK031865:-:50437..51564
Molecular Weight (calculated)
37671.1 Da
IEP (calculated)
4.017
GRAVY (calculated)
-0.585
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKLFGCPIN VKAEEEEDDG GGSSIAAEVS RSSNQPDGEA LRETYPYFRF LESNSDSGSV SMESEPDLHH CFIDFFDRES YAASNQRLST SHDFNFLGVQ
101: DMEEEIELGL RIGSGSGSDD SGELGLQVTP NLEIFTGRVE IDTGRVEIDT GRVEIDTGRV EIDTGRVEID TGRVEIDTGR VETDTGRVEI EWHGGYFDVF
201: FDESVDLAMD DFFDSLFPSY EYTVNNGDYE GVIARTFDES GINGSPPASK RMVDELPDVD VTSEELSIGC AICKDEIVDE EKVKRLPCRH YYHKECIVPW
301: LGIRNTCPVC RYELPTDDLE YERNKRSQRG VWQET
101: DMEEEIELGL RIGSGSGSDD SGELGLQVTP NLEIFTGRVE IDTGRVEIDT GRVEIDTGRV EIDTGRVEID TGRVEIDTGR VETDTGRVEI EWHGGYFDVF
201: FDESVDLAMD DFFDSLFPSY EYTVNNGDYE GVIARTFDES GINGSPPASK RMVDELPDVD VTSEELSIGC AICKDEIVDE EKVKRLPCRH YYHKECIVPW
301: LGIRNTCPVC RYELPTDDLE YERNKRSQRG VWQET
001: MASTKPDSAI NLEEEAEGDG VAVDDPIFIP ETTNLLVRYS PFDDRDIDCN PYFPFTGPIS DSGSGSYSDS EPDPNSCPID FFDRDSSDVD VAEYLESGGL
101: TAGDYNIWGF YDPKEDEEEE EIVLGTSGSD LQPGDSGEQG LRVTGIDSDS DCEDGVFDFI SEDSSGNRGN DSGRVEVGTG LPPVWDHLFG EGTVLADEEW
201: EEVQNAINWT AFSGPEDEDE EDELSSLSRD DEEEDHELDW QVLLTVNNVV NYIEQAEGIM LNPDDIDPDY YLYLSGLDEF DENHSGHYDA DAILGQMFDD
301: ETGIRGNPPA AKSVIQDLPV VELAVEELDK GNNVCAVCKD EMLVEEKVRR LPCSHFYHGE CIIPWLGIRN TCPVCRYELP TDDLEYERHK SSERGDTGLA
401: RNVLPGRYS
101: TAGDYNIWGF YDPKEDEEEE EIVLGTSGSD LQPGDSGEQG LRVTGIDSDS DCEDGVFDFI SEDSSGNRGN DSGRVEVGTG LPPVWDHLFG EGTVLADEEW
201: EEVQNAINWT AFSGPEDEDE EDELSSLSRD DEEEDHELDW QVLLTVNNVV NYIEQAEGIM LNPDDIDPDY YLYLSGLDEF DENHSGHYDA DAILGQMFDD
301: ETGIRGNPPA AKSVIQDLPV VELAVEELDK GNNVCAVCKD EMLVEEKVRR LPCSHFYHGE CIIPWLGIRN TCPVCRYELP TDDLEYERHK SSERGDTGLA
401: RNVLPGRYS
Arabidopsis Description
At3g02340 [Source:UniProtKB/TrEMBL;Acc:Q9FWA5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.