Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25360 | Canola | cytosol, nucleus, plastid | 94.7 | 94.12 |
| Bra035835.1-P | Field mustard | nucleus | 94.08 | 92.35 |
| CDY72364 | Canola | cytosol | 56.7 | 81.98 |
| CDY33437 | Canola | cytosol | 81.93 | 81.17 |
| CDY36069 | Canola | cytosol | 53.89 | 79.72 |
| CDX82271 | Canola | cytosol | 52.65 | 79.34 |
| AT3G19950.2 | Thale cress | cytosol | 74.77 | 62.18 |
| CDY22790 | Canola | nucleus | 42.37 | 50.37 |
| KRH36132 | Soybean | nucleus | 40.81 | 45.8 |
| PGSC0003DMT400082489 | Potato | nucleus | 44.86 | 44.72 |
| Solyc04g009170.1.1 | Tomato | nucleus | 42.99 | 44.66 |
| KRG90622 | Soybean | nucleus | 41.43 | 44.63 |
| CDY42507 | Canola | cytosol | 46.73 | 44.25 |
| Zm00001d045625_P001 | Maize | cytosol | 42.37 | 43.87 |
| EER89027 | Sorghum | nucleus | 42.37 | 42.37 |
| VIT_17s0053g00320.t01 | Wine grape | plastid | 46.42 | 40.38 |
| Os06t0101300-01 | Rice | nucleus | 41.74 | 39.65 |
| TraesCS7D01G000400.1 | Wheat | cytosol | 40.19 | 39.09 |
| TraesCS4A01G499200.1 | Wheat | cytosol, mitochondrion | 40.19 | 38.51 |
| HORVU7Hr1G000850.1 | Barley | cytosol, mitochondrion, nucleus | 39.25 | 35.29 |
| CDY22483 | Canola | mitochondrion | 28.97 | 30.69 |
| CDY26096 | Canola | nucleus | 27.73 | 30.27 |
| CDY23878 | Canola | mitochondrion, nucleus | 28.04 | 29.51 |
| CDY35437 | Canola | mitochondrion, nucleus | 28.66 | 29.02 |
| CDX75998 | Canola | nucleus | 17.13 | 28.65 |
| CDY10554 | Canola | cytosol | 27.1 | 28.52 |
| CDY46577 | Canola | nucleus | 25.86 | 28.52 |
| CDX92768 | Canola | nucleus | 26.79 | 27.83 |
| CDX72127 | Canola | mitochondrion | 27.1 | 27.53 |
| CDX79968 | Canola | mitochondrion, nucleus | 25.23 | 27.27 |
| CDY27204 | Canola | mitochondrion, nucleus | 26.48 | 27.24 |
| CDY43991 | Canola | nucleus | 26.17 | 27.18 |
| CDY08249 | Canola | cytosol | 28.35 | 27.16 |
| CDY56022 | Canola | nucleus | 26.17 | 26.84 |
| CDX92770 | Canola | nucleus | 26.79 | 26.54 |
| CDY50031 | Canola | cytosol | 23.68 | 26.21 |
| CDY56080 | Canola | cytosol | 23.05 | 26.06 |
| CDY32333 | Canola | cytosol | 19.0 | 25.96 |
| CDY42740 | Canola | nucleus | 25.55 | 25.47 |
| CDY32791 | Canola | nucleus | 27.41 | 25.0 |
| CDX74839 | Canola | cytosol, plastid | 25.23 | 25.0 |
| CDY20473 | Canola | nucleus, plastid | 25.86 | 24.85 |
| CDY56081 | Canola | nucleus | 18.38 | 24.69 |
| CDX94665 | Canola | nucleus | 18.07 | 24.68 |
| CDX94901 | Canola | cytosol | 23.99 | 24.52 |
| CDX80258 | Canola | plastid | 27.1 | 24.51 |
| CDX81263 | Canola | cytosol, peroxisome, plastid | 22.12 | 24.48 |
| CDX89343 | Canola | cytosol, mitochondrion | 26.79 | 24.43 |
| CDY68603 | Canola | cytosol | 18.38 | 24.38 |
| CDX74533 | Canola | cytosol | 22.12 | 24.32 |
| CDY28208 | Canola | cytosol | 17.45 | 24.14 |
| CDY18690 | Canola | cytosol, peroxisome, plastid | 22.12 | 23.75 |
| CDY53450 | Canola | cytosol | 23.68 | 23.6 |
| CDY61251 | Canola | cytosol | 25.86 | 22.99 |
| CDX88709 | Canola | cytosol, plastid | 28.04 | 22.84 |
| CDX94342 | Canola | mitochondrion, nucleus | 27.41 | 22.74 |
| CDY24951 | Canola | nucleus | 26.48 | 22.67 |
| CDY01669 | Canola | plastid | 22.74 | 22.6 |
| CDY33046 | Canola | plastid | 23.99 | 22.51 |
| CDY07641 | Canola | nucleus | 26.17 | 22.46 |
| CDX99105 | Canola | cytosol, plastid | 22.12 | 21.91 |
| CDY48679 | Canola | cytosol, plastid | 22.43 | 21.56 |
| CDY69134 | Canola | cytosol | 15.58 | 17.18 |
| CDX78323 | Canola | cytosol | 15.26 | 17.01 |
| CDY58938 | Canola | nucleus | 23.36 | 17.01 |
| CDY03622 | Canola | nucleus | 23.36 | 16.82 |
| CDX90972 | Canola | cytosol | 16.82 | 16.12 |
| CDY01221 | Canola | cytosol | 10.28 | 15.14 |
| CDX85531 | Canola | cytosol | 15.89 | 14.87 |
| CDX69973 | Canola | cytosol | 16.2 | 14.44 |
| CDY21513 | Canola | cytosol | 15.89 | 14.33 |
| CDY11934 | Canola | nucleus | 28.97 | 14.26 |
| CDX69496 | Canola | cytosol | 12.46 | 13.89 |
| CDY23599 | Canola | golgi, mitochondrion | 26.17 | 13.79 |
| CDY26465 | Canola | cytosol | 14.02 | 13.27 |
| CDY34722 | Canola | cytosol | 15.89 | 13.08 |
| CDY02194 | Canola | peroxisome | 16.2 | 13.07 |
| CDY34721 | Canola | cytosol | 15.58 | 12.82 |
| CDY51628 | Canola | peroxisome | 16.2 | 12.81 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078GHF9 |
| UniProt:A0A078GHF9 | EnsemblPlants:CDY24592 | ProteinID:CDY24592 | ProteinID:CDY24592.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0008270 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00026933001 | InterPro:IPR001841 | InterPro:IPR011016 | InterPro:IPR013083 |
| PFAM:PF13639 | PFAM:PF14369 | PFscan:PS50089 | PANTHER:PTHR44679 | PANTHER:PTHR44679:SF1 | SMART:SM00184 |
| SMART:SM00744 | SUPFAM:SSF57850 | UniParc:UPI0004EF04E4 | InterPro:Znf_RING | InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaC05g32760DBnaC05g32760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GHF9]
Coordinates
chrLK032161:-:231791..233797
Molecular Weight (calculated)
34202.6 Da
IEP (calculated)
4.355
GRAVY (calculated)
-0.521
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGGNSTAS TAPAVEKMFF CYQCNRTVNI SISISSAADP FCPLCSGGFL EEYDEPVPTL PPNLNPESGF FPMADPFSTL LPLLFGSSSA PPSSTNPSFF
101: GPRSTQNQPQ GGAFDPVSFL QNHLQHLQSS GTHVQFLIED HPLDPSNRAP GHVGDYFFGP GLEQLIQQLA ENDPNRYGTP PASKSAIEGL PTVKVSKDML
201: KSEMNQCAVC MDEFEDGGDV KQMPCKHVFH QDCLMPWLEL HNSCPVCRYE LPTDDPDYEN RGQGQGGQTS GDGGQTPRSF SVQLPWTFGG RRDGSGSGAP
301: GSGGGGGGGG SNLGTRQEDL D
101: GPRSTQNQPQ GGAFDPVSFL QNHLQHLQSS GTHVQFLIED HPLDPSNRAP GHVGDYFFGP GLEQLIQQLA ENDPNRYGTP PASKSAIEGL PTVKVSKDML
201: KSEMNQCAVC MDEFEDGGDV KQMPCKHVFH QDCLMPWLEL HNSCPVCRYE LPTDDPDYEN RGQGQGGQTS GDGGQTPRSF SVQLPWTFGG RRDGSGSGAP
301: GSGGGGGGGG SNLGTRQEDL D
001: MGFSPKSVII VSELESATYD ITENYFSLSS DGSFLPSSSR FFCFVVSLSR SEKFAESVMS SGVNSTGSAA AAPEVDKMFF CYQCNQTVTI SISSSADPFC
101: PICNQGFLEE YEDPNPNQSL NFNPNSSDSF FPMADPFSTL LPLIFGSSAA APSGMDFMSL FGPSMQPQAR STQQNPQSDA FDPFTFLQNH LQTLRSSGTH
201: FEFVIENHPS DPGNRMPGNF GDYFFGPGLE QLIQQLAEND PNRYGTPPAS KSAIDALPTV KVTKDMLKSE MNQCAVCMDE FEDGSDVKQM PCKHVFHQDC
301: LLPWLELHNS CPVCRFELPT DDPDYENRSQ GSQGSGDGQG SVEGQQTPRF SIQLPWPFRR QDGSGSGSGA PGTGGGNLET RGEDLD
101: PICNQGFLEE YEDPNPNQSL NFNPNSSDSF FPMADPFSTL LPLIFGSSAA APSGMDFMSL FGPSMQPQAR STQQNPQSDA FDPFTFLQNH LQTLRSSGTH
201: FEFVIENHPS DPGNRMPGNF GDYFFGPGLE QLIQQLAEND PNRYGTPPAS KSAIDALPTV KVTKDMLKSE MNQCAVCMDE FEDGSDVKQM PCKHVFHQDC
301: LLPWLELHNS CPVCRFELPT DDPDYENRSQ GSQGSGDGQG SVEGQQTPRF SIQLPWPFRR QDGSGSGSGA PGTGGGNLET RGEDLD
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQQ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.