Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007253.1-P | Field mustard | mitochondrion, nucleus | 96.47 | 97.1 |
| CDX72127 | Canola | mitochondrion | 96.79 | 95.57 |
| AT3G56580.1 | Thale cress | mitochondrion | 77.24 | 75.31 |
| CDX75998 | Canola | nucleus | 44.23 | 71.88 |
| CDX94901 | Canola | cytosol | 63.46 | 63.06 |
| CDY23878 | Canola | mitochondrion, nucleus | 61.54 | 62.95 |
| CDX79968 | Canola | mitochondrion, nucleus | 59.29 | 62.29 |
| CDY35437 | Canola | mitochondrion, nucleus | 61.54 | 60.57 |
| CDY22483 | Canola | mitochondrion | 58.01 | 59.74 |
| KRH71659 | Soybean | nucleus | 49.36 | 49.84 |
| VIT_08s0040g00590.t01 | Wine grape | nucleus | 50.0 | 49.68 |
| KRH33121 | Soybean | nucleus | 49.04 | 49.51 |
| Os03t0351800-01 | Rice | nucleus | 43.59 | 48.06 |
| GSMUA_Achr8P09890_001 | Banana | nucleus | 34.94 | 47.19 |
| EER92269 | Sorghum | nucleus | 42.95 | 47.02 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.78 | 46.9 |
| TraesCS3D01G432800.1 | Wheat | mitochondrion | 42.95 | 46.37 |
| TraesCS3A01G440000.1 | Wheat | mitochondrion | 42.95 | 46.37 |
| TraesCS3B01G474100.1 | Wheat | mitochondrion | 42.63 | 46.18 |
| Zm00001d047476_P001 | Maize | mitochondrion | 42.95 | 45.89 |
| HORVU3Hr1G096110.1 | Barley | mitochondrion | 42.31 | 45.67 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus, plastid | 37.18 | 44.79 |
| PGSC0003DMT400058464 | Potato | nucleus | 44.87 | 44.03 |
| Solyc01g009000.2.1 | Tomato | plastid | 44.55 | 43.71 |
| KRH14643 | Soybean | nucleus | 46.47 | 43.15 |
| VIT_06s0009g02350.t01 | Wine grape | mitochondrion | 45.51 | 42.26 |
| KRH18631 | Soybean | nucleus | 41.03 | 41.83 |
| PGSC0003DMT400079301 | Potato | nucleus | 37.18 | 38.67 |
| Solyc08g075910.1.1 | Tomato | nucleus | 36.86 | 38.21 |
| KRH73496 | Soybean | mitochondrion | 44.23 | 37.2 |
| KRH18634 | Soybean | nucleus | 26.6 | 35.17 |
| GSMUA_Achr11P... | Banana | mitochondrion | 33.33 | 34.78 |
| CDY36069 | Canola | cytosol | 23.08 | 33.18 |
| CDX82271 | Canola | cytosol | 22.44 | 32.86 |
| CDY72364 | Canola | cytosol | 23.08 | 32.43 |
| CDY46577 | Canola | nucleus | 27.24 | 29.21 |
| CDX74533 | Canola | cytosol | 25.96 | 27.74 |
| CDY22790 | Canola | nucleus | 23.08 | 26.67 |
| CDY33437 | Canola | cytosol | 27.56 | 26.54 |
| CDY24592 | Canola | nucleus | 27.24 | 26.48 |
| CDY25360 | Canola | cytosol, nucleus, plastid | 26.28 | 25.39 |
| CDX92768 | Canola | nucleus | 24.68 | 24.92 |
| CDY01669 | Canola | plastid | 25.64 | 24.77 |
| CDY32791 | Canola | nucleus | 27.88 | 24.72 |
| CDY10554 | Canola | cytosol | 24.04 | 24.59 |
| CDY26096 | Canola | nucleus | 22.76 | 24.15 |
| CDY68603 | Canola | cytosol | 18.59 | 23.97 |
| CDX94665 | Canola | nucleus | 17.95 | 23.83 |
| CDX92770 | Canola | nucleus | 24.68 | 23.77 |
| CDY42507 | Canola | cytosol | 25.64 | 23.6 |
| CDY32333 | Canola | cytosol | 17.63 | 23.4 |
| CDX80258 | Canola | plastid | 26.6 | 23.38 |
| CDY20473 | Canola | nucleus, plastid | 25.0 | 23.35 |
| CDY42740 | Canola | nucleus | 24.04 | 23.29 |
| CDY56022 | Canola | nucleus | 23.08 | 23.0 |
| CDX74839 | Canola | cytosol, plastid | 23.72 | 22.84 |
| CDY43991 | Canola | nucleus | 22.44 | 22.65 |
| CDY56080 | Canola | cytosol | 20.51 | 22.54 |
| CDX89343 | Canola | cytosol, mitochondrion | 25.32 | 22.44 |
| CDY08249 | Canola | cytosol | 24.04 | 22.39 |
| CDY53450 | Canola | cytosol | 23.08 | 22.36 |
| CDY24951 | Canola | nucleus | 26.6 | 22.13 |
| CDY50031 | Canola | cytosol | 20.51 | 22.07 |
| CDY61251 | Canola | cytosol | 25.32 | 21.88 |
| CDY07641 | Canola | nucleus | 25.96 | 21.66 |
| CDX94342 | Canola | mitochondrion, nucleus | 25.96 | 20.93 |
| CDX99105 | Canola | cytosol, plastid | 21.47 | 20.68 |
| CDY56081 | Canola | nucleus | 15.38 | 20.08 |
| CDY33046 | Canola | plastid | 21.79 | 19.88 |
| CDX88709 | Canola | cytosol, plastid | 25.0 | 19.8 |
| CDY48679 | Canola | cytosol, plastid | 21.15 | 19.76 |
| CDX81263 | Canola | cytosol, peroxisome, plastid | 18.27 | 19.66 |
| CDY18690 | Canola | cytosol, peroxisome, plastid | 18.27 | 19.06 |
| CDY28208 | Canola | cytosol | 13.78 | 18.53 |
| CDY01221 | Canola | cytosol | 12.18 | 17.43 |
| CDY69134 | Canola | cytosol | 15.38 | 16.49 |
| CDY58938 | Canola | nucleus | 22.76 | 16.1 |
| CDX78323 | Canola | cytosol | 14.74 | 15.97 |
| CDY03622 | Canola | nucleus | 22.76 | 15.92 |
| CDX69973 | Canola | cytosol | 18.27 | 15.83 |
| CDY21513 | Canola | cytosol | 17.63 | 15.45 |
| CDX69496 | Canola | cytosol | 13.46 | 14.58 |
| CDX85531 | Canola | cytosol | 15.71 | 14.29 |
| CDX90972 | Canola | cytosol | 15.06 | 14.03 |
| CDY34721 | Canola | cytosol | 16.99 | 13.59 |
| CDY34722 | Canola | cytosol | 16.99 | 13.59 |
| CDY02194 | Canola | peroxisome | 17.31 | 13.57 |
| CDY51628 | Canola | peroxisome | 17.63 | 13.55 |
| CDY26465 | Canola | cytosol | 14.1 | 12.98 |
| CDY11934 | Canola | nucleus | 26.6 | 12.73 |
| CDY23599 | Canola | golgi, mitochondrion | 22.12 | 11.33 |
Protein Annotations
| EnsemblPlants:CDY27204 | EnsemblPlantsGene:GSBRNA2T00037076001 | Gene3D:3.30.40.10 | GO:A0A078GPQ0 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR44290 | PANTHER:PTHR44290:SF1 | PFAM:PF13639 | PFAM:PF14369 |
| PFscan:PS50089 | ProteinID:CDY27204 | ProteinID:CDY27204.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI0004EE89DF | UniProt:A0A078GPQ0 | MapMan:35.1 | : | : | : |
Description
BnaA09g35980DBnaA09g35980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPQ0]
Coordinates
chrLK032201:-:156779..158707
Molecular Weight (calculated)
34535.9 Da
IEP (calculated)
7.793
GRAVY (calculated)
-0.811
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGRNTHWCH RCQRGVYLRG PDSLCTYCGG GFVEEIDVTP FRAHRDLERG PTYDLMEAFS AFMRSRLAER SHDTGRITAS SGGGGGGSES FSSIAPFLIF
101: GGQANNTSVE ALLNTSPGGI GITRGGNVNA GDYFYGPGLE ELIEQLSSGT THHRGPPPAP KSSIDALPTV KITQKHLKSS DSHCPVCKEE FELKSEAKQM
201: PCKHMYHSEC IVPWLVQHNT CPVCRKELPS RGSSSSTERD QNRGSNRRRN VFSSLWPFRS SSSSSTQNRR ETSNTATAEE GGQYNNNHHQ LHHQQQHEQQ
301: SHMGYSGWPF DY
101: GGQANNTSVE ALLNTSPGGI GITRGGNVNA GDYFYGPGLE ELIEQLSSGT THHRGPPPAP KSSIDALPTV KITQKHLKSS DSHCPVCKEE FELKSEAKQM
201: PCKHMYHSEC IVPWLVQHNT CPVCRKELPS RGSSSSTERD QNRGSNRRRN VFSSLWPFRS SSSSSTQNRR ETSNTATAEE GGQYNNNHHQ LHHQQQHEQQ
301: SHMGYSGWPF DY
001: MSSIRNTHWC HRCQRAVWLR ARDAVCSYCG GGFVEEIDIG PSRAHRDVER DPTFDLMEAF SAFMRSRLAE RSYDREISGR LGSAGSESFS NLAPLLIFGG
101: QAPFRLAGGD NSSVEAFVNG AAPGIGIARG TNAGDYFFGP GLEELIEQLS SGTHHRGPPP APKSSIDALP TIKITQKHLK SSDSHCPVCK DEFELKSEAK
201: QMPCHHIYHS DCIVPWLVQH NSCPVCRKEL PSRGSSSSTQ SSQNRSTNGR ENSRRRNIFS NLWPFRSSSS SSTQNRRDTN NTATAEEGHY HHHQQQQQQH
301: QHQHQQQQSH MGYSGWPFDY
101: QAPFRLAGGD NSSVEAFVNG AAPGIGIARG TNAGDYFFGP GLEELIEQLS SGTHHRGPPP APKSSIDALP TIKITQKHLK SSDSHCPVCK DEFELKSEAK
201: QMPCHHIYHS DCIVPWLVQH NSCPVCRKEL PSRGSSSSTQ SSQNRSTNGR ENSRRRNIFS NLWPFRSSSS SSTQNRRDTN NTATAEEGHY HHHQQQQQQH
301: QHQHQQQQSH MGYSGWPFDY
Arabidopsis Description
RZF1E3 ubiquitin-protein ligase RZF1 [Source:UniProtKB/Swiss-Prot;Acc:Q94AK4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.